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ONTOLOGY REPORT - ANNOTATIONS


Term:organic cation transport
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Accession:GO:0015695 term browser browse the term
Definition:The directed movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage.


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organic cation transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:628349
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:634159
RGD:1624291
RGD:13792537
G Slc22a16 solute carrier family 22 member 16 JBrowse link 20 45,658,398 45,669,192 RGD:1624291
G Slc22a2 solute carrier family 22 member 2 JBrowse link 1 48,318,025 48,360,219 RGD:2317436
RGD:30309940
RGD:1624291
RGD:13792537
RGD:1600115
G Slc22a3 solute carrier family 22 member 3 JBrowse link 1 48,433,079 48,521,261 RGD:70010
RGD:1624291
RGD:1643218
RGD:1643215
G Slc29a4 solute carrier family 29 member 4 JBrowse link 12 13,914,114 13,924,511 RGD:1624291
G Slc47a1 solute carrier family 47 member 1 JBrowse link 10 47,631,425 47,685,379 RGD:2316962
RGD:13792537
G Slc7a8 solute carrier family 7 member 8 JBrowse link 15 33,369,245 33,428,942 RGD:1600115
(R)-carnitine transmembrane transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:1624291
RGD:30309931
acetylcholine secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc44a4 solute carrier family 44, member 4 JBrowse link 20 4,593,389 4,609,641 RGD:1600115
RGD:1624291
acetylcholine transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl2 ADP-ribosylation factor like GTPase 2 JBrowse link 1 221,504,150 221,516,191 RGD:68743
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:2317426
acyl carnitine transmembrane transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc25a20 solute carrier family 25 member 20 JBrowse link 8 117,455,308 117,476,762 RGD:1600115
G Slc25a29 solute carrier family 25 member 29 JBrowse link 6 132,736,964 132,747,912 RGD:1624291
RGD:1600115
G Slc25a45 solute carrier family 25, member 45 JBrowse link 1 221,236,817 221,244,564 RGD:1600115
G Slc25a47 solute carrier family 25, member 47 JBrowse link 6 132,762,306 132,767,940 RGD:1600115
G Slc25a48 solute carrier family 25, member 48 JBrowse link 17 8,567,014 8,608,213 RGD:1600115
acyl carnitine transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc25a29 solute carrier family 25 member 29 JBrowse link 6 132,736,964 132,747,912 RGD:1624291
RGD:13792537
G Slc25a45 solute carrier family 25, member 45 JBrowse link 1 221,236,817 221,244,564 RGD:13792537
G Slc25a47 solute carrier family 25, member 47 JBrowse link 6 132,762,306 132,767,940 RGD:13792537
G Slc25a48 solute carrier family 25, member 48 JBrowse link 17 8,567,014 8,608,213 RGD:13792537
amiloride transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aoc1 amine oxidase, copper containing 1 JBrowse link 4 78,496,043 78,515,582 RGD:724757
amino-acid betaine transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc6a20 solute carrier family 6 member 20 JBrowse link 8 132,713,013 132,753,145 RGD:1624291
RGD:30309905
RGD:1600115
AMP transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc25a17 solute carrier family 25 member 17 JBrowse link 7 122,539,293 122,581,777 RGD:1600115
G Slc25a42 solute carrier family 25, member 42 JBrowse link 16 20,962,144 21,000,191 RGD:1600115
RGD:1624291
carnitine transmembrane transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a4 solute carrier family 22 member 4 JBrowse link 10 39,334,972 39,373,508 RGD:1600115
G Slc25a20 solute carrier family 25 member 20 JBrowse link 8 117,455,308 117,476,762 RGD:13440120
carnitine transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdzk1 PDZ domain containing 1 JBrowse link 2 198,965,685 198,999,323 RGD:1624291
G Slc22a16 solute carrier family 22 member 16 JBrowse link 20 45,658,398 45,669,192 RGD:1624291
G Slc22a4 solute carrier family 22 member 4 JBrowse link 10 39,334,972 39,373,508 RGD:1624291
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:730132
RGD:1624291
RGD:1643150
RGD:1643142
RGD:1643141
RGD:1643135
G Slc25a29 solute carrier family 25 member 29 JBrowse link 6 132,736,964 132,747,912 RGD:1624291
RGD:1600115
choline transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
G Scn4a sodium voltage-gated channel alpha subunit 4 JBrowse link 10 94,505,026 94,557,803 RGD:7243169
G Sec14l1 SEC14-like lipid binding 1 JBrowse link 10 106,065,712 106,112,859 RGD:1624291
G Slc22a2 solute carrier family 22 member 2 JBrowse link 1 48,318,025 48,360,219 RGD:1600115
RGD:1624291
G Slc44a1 solute carrier family 44 member 1 JBrowse link 5 70,243,643 70,424,115 RGD:1600115
RGD:13792537
RGD:1624291
RGD:15090833
G Slc44a2 solute carrier family 44 member 2 JBrowse link 8 22,351,277 22,385,869 RGD:1624291
RGD:13792537
G Slc44a4 solute carrier family 44, member 4 JBrowse link 20 4,593,389 4,609,641 RGD:1600115
RGD:13792537
RGD:1624291
G Slc5a7 solute carrier family 5 member 7 JBrowse link 9 5,294,377 5,330,822 RGD:1600115
RGD:13792537
RGD:1624291
G Slc6a8 solute carrier family 6 member 8 JBrowse link X 157,129,987 157,139,321 RGD:1600115
daunorubicin transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:8657094
doxorubicin transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ralbp1 ralA binding protein 1 JBrowse link 9 113,579,107 113,598,477 RGD:1624291
glycine betaine transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc38a2 solute carrier family 38, member 2 JBrowse link 7 138,088,654 138,100,869 RGD:9999215
negative regulation of acetylcholine secretion, neurotransmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htr6 5-hydroxytryptamine receptor 6 JBrowse link 5 157,501,202 157,518,870 RGD:2317005
negative regulation of serotonin secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd300a Cd300a molecule JBrowse link 10 103,437,978 103,451,170 RGD:1624291
G Cnr1 cannabinoid receptor 1 JBrowse link 5 49,307,584 49,333,064 RGD:15023474
G Hrh3 histamine receptor H3 JBrowse link 3 175,474,310 175,479,395 RGD:1626430
RGD:13792537
G Htr1b 5-hydroxytryptamine receptor 1B JBrowse link 8 89,113,984 89,130,830 RGD:1624291
RGD:1600115
G Htr7 5-hydroxytryptamine receptor 7 JBrowse link 1 254,547,964 254,671,811 RGD:6480684
G Maob monoamine oxidase B JBrowse link X 6,430,694 6,533,520 RGD:2316765
negative regulation of serotonin uptake term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpm6b glycoprotein m6b JBrowse link X 29,604,607 29,751,174 RGD:1624291
RGD:13792537
RGD:1600115
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:1600115
RGD:1624291
G Slc18a1 solute carrier family 18 member A1 JBrowse link 16 22,358,646 22,395,183 RGD:5130998
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
positive regulation of acetylcholine secretion, neurotransmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adora2a adenosine A2a receptor JBrowse link 20 14,265,251 14,282,873 RGD:1625693
G Htr2c 5-hydroxytryptamine receptor 2C JBrowse link X 118,084,520 118,318,040 RGD:1625007
G Tacr2 tachykinin receptor 2 JBrowse link 20 31,892,515 31,905,153 RGD:5147477
positive regulation of serotonin secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crhr2 corticotropin releasing hormone receptor 2 JBrowse link 4 85,286,371 85,329,374 RGD:5130946
G Lgals3 galectin 3 JBrowse link 15 24,153,602 24,165,537 RGD:9685207
G Slc6a4 solute carrier family 6 member 4 JBrowse link 10 63,153,656 63,188,377 RGD:11532763
quaternary ammonium group transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07029596.1 RGD:13792537
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:1643122
RGD:1624291
RGD:1643126
RGD:1643123
G Slc22a2 solute carrier family 22 member 2 JBrowse link 1 48,318,025 48,360,219 RGD:1643123
G Slc22a3 solute carrier family 22 member 3 JBrowse link 1 48,433,079 48,521,261 RGD:70010
RGD:1624291
G Slc22a4 solute carrier family 22 member 4 JBrowse link 10 39,334,972 39,373,508 RGD:633351
RGD:13792537
RGD:1624291
RGD:1643126
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:70011
RGD:1624291
RGD:1643141
RGD:1643135
RGD:1643126
G Slc22a8 solute carrier family 22 member 8 JBrowse link 1 224,799,444 224,818,482 RGD:1643126
regulation of acetylcholine secretion, neurotransmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1600115
RGD:1624291
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit JBrowse link 8 59,594,007 59,607,122 RGD:1624291
regulation of serotonin secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crh corticotropin releasing hormone JBrowse link 2 104,459,999 104,461,863 RGD:5507821
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:1624291
RGD:1600115
regulation of serotonin uptake term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:1624291
RGD:1600115
serotonin secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fcer1a Fc fragment of IgE receptor Ia JBrowse link 13 91,727,253 91,737,106 RGD:1624291
G Fcgr2a Fc fragment of IgG receptor IIa JBrowse link 13 91,146,878 91,163,691 RGD:1624291
G Syk spleen associated tyrosine kinase JBrowse link 17 12,614,311 12,669,568 RGD:1624291
serotonin secretion by mast cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd300a Cd300a molecule JBrowse link 10 103,437,978 103,451,170 RGD:1624291
serotonin secretion by platelet term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fcer1g Fc fragment of IgE receptor Ig JBrowse link 13 89,601,894 89,606,326 RGD:1624291
G P2rx1 purinergic receptor P2X 1 JBrowse link 10 59,566,268 59,581,328 RGD:1624291
G Syk spleen associated tyrosine kinase JBrowse link 17 12,614,311 12,669,568 RGD:1600115
RGD:1624291
serotonin secretion, neurotransmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Xbp1 X-box binding protein 1 JBrowse link 14 85,753,736 85,758,820 RGD:2326003
serotonin transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a3 solute carrier family 22 member 3 JBrowse link 1 48,433,079 48,521,261 RGD:1624291
G Slc6a4 solute carrier family 6 member 4 JBrowse link 10 63,153,656 63,188,377 RGD:730261
RGD:1624291
RGD:8553990
RGD:1580635
serotonin uptake term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc18a1 solute carrier family 18 member A1 JBrowse link 16 22,358,646 22,395,183 RGD:5131091
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:1600115
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:1624291
G Slc22a2 solute carrier family 22 member 2 JBrowse link 1 48,318,025 48,360,219 RGD:1624291
G Slc22a3 solute carrier family 22 member 3 JBrowse link 1 48,433,079 48,521,261 RGD:1624291
G Slc29a4 solute carrier family 29 member 4 JBrowse link 12 13,914,114 13,924,511 RGD:1624291
G Slc6a4 solute carrier family 6 member 4 JBrowse link 10 63,153,656 63,188,377 RGD:1580638
RGD:1624291
RGD:8554226
RGD:13792537
RGD:8553308
RGD:8553687
sodium-dependent organic cation transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:1624291
thiamine pyrophosphate transmembrane transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07005723.1 RGD:13792537
G RGD1561206 similar to solute carrier family 25 (mitochondrial deoxynucleotide carrier), member 19 JBrowse link 1 195,439,875 195,441,353 RGD:13792537
G Slc25a19 solute carrier family 25 member 19 JBrowse link 10 104,166,594 104,179,523 RGD:13792537
G Slc44a4 solute carrier family 44, member 4 JBrowse link 20 4,593,389 4,609,641 RGD:1624291
RGD:13792537
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    localization 6457
      establishment of localization 4905
        transport 4762
          organic substance transport 2613
            organic cation transport 67
              2-aminoethylphosphonate transport 0
              AMP transport 2
              acetylcholine transport + 9
              acriflavine transport 0
              amiloride transport 1
              cadaverine transport 0
              choline transport 9
              chrysobactin transport 0
              daunorubicin transport 1
              doxorubicin transport 1
              ethanolamine transport 0
              methylammonium transport + 0
              octopamine secretion + 0
              primary amine secretion + 0
              putrescine transport 0
              pyridoxal transport + 0
              pyridoxamine transport + 0
              quaternary ammonium group transport + 16
              serotonin transport + 27
              sodium-dependent organic cation transport 1
              spermidine transport + 0
              sphingoid long-chain base transport 0
              thiamine pyrophosphate transmembrane transport + 4
Path 2
Term Annotations click to browse term
  biological_process 19858
    localization 6457
      establishment of localization 4905
        transport 4762
          ion transport 1771
            cation transport 1267
              organic cation transport 67
                2-aminoethylphosphonate transport 0
                AMP transport 2
                acetylcholine transport + 9
                acriflavine transport 0
                amiloride transport 1
                cadaverine transport 0
                choline transport 9
                chrysobactin transport 0
                daunorubicin transport 1
                doxorubicin transport 1
                ethanolamine transport 0
                methylammonium transport + 0
                octopamine secretion + 0
                primary amine secretion + 0
                putrescine transport 0
                pyridoxal transport + 0
                pyridoxamine transport + 0
                quaternary ammonium group transport + 16
                serotonin transport + 27
                sodium-dependent organic cation transport 1
                spermidine transport + 0
                sphingoid long-chain base transport 0
                thiamine pyrophosphate transmembrane transport + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.