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ONTOLOGY REPORT - ANNOTATIONS


Term:quaternary ammonium group transport
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Accession:GO:0015697 term browser browse the term
Definition:The directed movement into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.
Synonyms:exact_synonym: quaternary amine transport;   quaternary ammonium compound transport
 alt_id: GO:0015845


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quaternary ammonium group transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07029596.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:39,330,731...39,373,437 JBrowse link
G Slc22a1 solute carrier family 22 member 1 IDA
ISO
(PMID:23567998) RGD PMID:23567998, PMID:9776363, PMID:17616214, PMID:9808712 RGD:1643122, RGD:1643126, RGD:1643123 NCBI chr 1:48,273,639...48,300,645
Ensembl chr 1:48,273,611...48,300,655
JBrowse link
G Slc22a2 solute carrier family 22 member 2 IDA RGD PMID:9808712 RGD:1643123 NCBI chr 1:48,318,025...48,360,219
Ensembl chr 1:48,317,995...48,360,261
JBrowse link
G Slc22a3 solute carrier family 22 member 3 IMP
ISO
(PMID:10966924), (PMID:20858707)
(MGI:MGI:1890056|PMID:10966924)
RGD PMID:10966924, PMID:20858707, PMID:9632645 MGI:MGI:1890056, RGD:70010 NCBI chr 1:48,433,079...48,521,261
Ensembl chr 1:48,433,079...48,521,256
JBrowse link
G Slc22a4 solute carrier family 22 member 4 IMP
IBA
ISO
IDA
PMID:21873635
(PMID:23567998), (PMID:9426230)
(MGI:MGI:1928404|PMID:11010964)
RGD PMID:9426230, PMID:11010964, PMID:23567998, PMID:10825452, PMID:21873635, PMID:17616214 MGI:MGI:1928404, RGD:633351, RGD:13792537, RGD:1643126 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc22a5 solute carrier family 22 member 5 IMP
ISO
IDA
(PMID:23567998), (PMID:9618255)
(MGI:MGI:1928404|PMID:11010964)
sodium-independent
RGD PMID:9618255, PMID:11010964, PMID:23567998, PMID:10454528, PMID:12644265, PMID:10636865, PMID:17616214 MGI:MGI:1928404, RGD:70011, RGD:1643141, RGD:1643135, RGD:1643126 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
G Slc22a8 solute carrier family 22 member 8 IDA RGD PMID:17616214 RGD:1643126 NCBI chr 1:224,799,444...224,818,482
Ensembl chr 1:224,800,252...224,818,482
JBrowse link
(R)-carnitine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 ISO
IEA
IMP
(PMID:23877104)
GO_REF:0000107
(MGI:MGI:6437032|PMID:14595704)
PMID:28257821
RGD
Ensembl
PMID:14595704, PMID:23877104, PMID:28257821 GO_REF:0000107, MGI:MGI:6437032, RGD:30309931 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
acyl carnitine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a20 solute carrier family 25 member 20 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:117,455,308...117,476,762
Ensembl chr 8:117,455,262...117,476,734
JBrowse link
G Slc25a29 solute carrier family 25 member 29 NOT ISO
ISS
(PMID:24652292)
GO_REF:0000024
RGD
UniProt
PMID:24652292 GO_REF:0000024 NCBI chr 6:132,736,964...132,747,912
Ensembl chr 6:132,735,883...132,747,828
JBrowse link
G Slc25a45 solute carrier family 25, member 45 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:221,236,817...221,244,564
Ensembl chr 1:221,236,773...221,244,563
JBrowse link
G Slc25a47 solute carrier family 25, member 47 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:132,762,306...132,767,940
Ensembl chr 6:132,762,280...132,768,379
JBrowse link
G Slc25a48 solute carrier family 25, member 48 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:8,567,014...8,608,213
Ensembl chr17:8,570,472...8,607,494
JBrowse link
acyl carnitine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a29 solute carrier family 25 member 29 ISO
IBA
(MGI:MGI:2677114|PMID:12882971)
PMID:21873635
RGD PMID:12882971, PMID:21873635 MGI:MGI:2677114, RGD:13792537 NCBI chr 6:132,736,964...132,747,912
Ensembl chr 6:132,735,883...132,747,828
JBrowse link
G Slc25a45 solute carrier family 25, member 45 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:221,236,817...221,244,564
Ensembl chr 1:221,236,773...221,244,563
JBrowse link
G Slc25a47 solute carrier family 25, member 47 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:132,762,306...132,767,940
Ensembl chr 6:132,762,280...132,768,379
JBrowse link
G Slc25a48 solute carrier family 25, member 48 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:8,567,014...8,608,213
Ensembl chr17:8,570,472...8,607,494
JBrowse link
amino-acid betaine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc6a20 solute carrier family 6 member 20 ISO
IMP
IEA
(MGI:MGI:3820712|PMID:19029042)
PMID:26028423
GO_REF:0000107
RGD
Ensembl
PMID:19029042, PMID:26028423 GO_REF:0000107, MGI:MGI:3820712, RGD:30309905 NCBI chr 8:132,713,013...132,753,145
Ensembl chr 8:132,665,927...132,753,292
JBrowse link
carnitine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07029596.1 IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr10:39,330,731...39,373,437 JBrowse link
G Slc22a4 solute carrier family 22 member 4 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc25a20 solute carrier family 25 member 20 IDA RGD PMID:2223786 RGD:13440120 NCBI chr 8:117,455,308...117,476,762
Ensembl chr 8:117,455,262...117,476,734
JBrowse link
carnitine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdzk1 PDZ domain containing 1 ISO (PMID:15523054) RGD PMID:15523054 NCBI chr 2:198,965,685...198,999,323
Ensembl chr 2:198,965,685...198,999,323
JBrowse link
G Slc22a16 solute carrier family 22 member 16 ISO (PMID:12089149) RGD PMID:12089149 NCBI chr20:45,658,398...45,669,192 JBrowse link
G Slc22a4 solute carrier family 22 member 4 ISO (PMID:16729965)
(MGI:MGI:1928404|PMID:11010964)
RGD PMID:11010964, PMID:16729965 MGI:MGI:1928404 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc22a5 solute carrier family 22 member 5 IDA
ISO
IMP
MGI:MGI:1856926 (MGI:MGI:1206151|PMID:9634010), (MGI:MGI:1327457|PMID:9916797), (MGI:MGI:1338996|PMID:10087008), (MGI:MGI:1351704|PMID:10498652), (MGI:MGI:1928404|PMID:11010964), (MGI:MGI:66711|PMID:8155735), (MGI:MGI:81093|PMID:8670273)
(PMID:9685390), (PMID:9916797)
sodium-dependent
RGD PMID:8155735, PMID:8670273, PMID:9634010, PMID:9685390, PMID:9916797, PMID:10087008, PMID:10498652, PMID:11010964, PMID:9792817, PMID:10636865, PMID:12644265, PMID:15923388, PMID:16322553 MGI:MGI:1206151, MGI:MGI:1327457, MGI:MGI:1338996, MGI:MGI:1351704, MGI:MGI:1928404, MGI:MGI:66711, MGI:MGI:81093, RGD:730132, RGD:1643135, RGD:1643141, RGD:1643142, RGD:1643150 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
G Slc25a29 solute carrier family 25 member 29 NOT ISO
ISS
(PMID:24652292)
GO_REF:0000024
RGD
UniProt
PMID:24652292 GO_REF:0000024 NCBI chr 6:132,736,964...132,747,912
Ensembl chr 6:132,735,883...132,747,828
JBrowse link
glycine betaine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc38a2 solute carrier family 38, member 2 IDA RGD PMID:24434061 RGD:9999215 NCBI chr 7:138,088,654...138,100,869
Ensembl chr 7:138,088,649...138,100,841
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    localization 6486
      establishment of localization 4918
        transport 4774
          nitrogen compound transport 2181
            quaternary ammonium group transport 16
              N-methylnicotinate transport 0
              acyl carnitine transport + 5
              amino-acid betaine transport + 9
              platelet activating factor secretion + 0
Path 2
Term Annotations click to browse term
  biological_process 20017
    localization 6486
      establishment of localization 4918
        transport 4774
          ion transport 1782
            cation transport 1281
              organic cation transport 67
                quaternary ammonium group transport 16
                  N-methylnicotinate transport 0
                  acyl carnitine transport + 5
                  amino-acid betaine transport + 9
                  platelet activating factor secretion + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.