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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleoside transport
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Accession:GO:0015858 term browser browse the term
Definition:The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


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nucleoside transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc29a1 solute carrier family 29 member 1 IDA
ISO
(MGI:1929056|PMID:11085929), (MGI:1930853|PMID:11179696)
(PMID:12527552)
RGD PMID:11085929, PMID:11179696, PMID:12527552, PMID:9353301 MGI:1929056, MGI:1930853, RGD:61755 NCBI chr 9:17,784,468...17,799,008
Ensembl chr 9:17,784,468...17,799,005
JBrowse link
G Slc29a2 solute carrier family 29 member 2 IDA
ISO
(MGI:1929056|PMID:11085929)
(PMID:12527552)
RGD PMID:11085929, PMID:12527552, PMID:9353301 MGI:1929056, RGD:61755 NCBI chr 1:220,306,622...220,314,631
Ensembl chr 1:220,400,855...220,407,189
Ensembl chr 1:220,400,855...220,407,189
JBrowse link
G Slc29a3 solute carrier family 29 member 3 IMP RGD PMID:15289294 RGD:1302898 NCBI chr20:30,289,527...30,327,343
Ensembl chr20:30,287,424...30,327,361
JBrowse link
adenosine transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc28a2 solute carrier family 28 member 2 ISO
IEA
(PMID:10087507)
GO_REF:0000107
RGD
Ensembl
PMID:10087507 GO_REF:0000107 NCBI chr 3:114,355,003...114,647,382
Ensembl chr 3:114,355,798...114,647,382
JBrowse link
G Slc29a1 solute carrier family 29 member 1 ISO (PMID:9396714)
(MGI:5902903|PMID:28069792)
RGD PMID:9396714, PMID:28069792 MGI:5902903 NCBI chr 9:17,784,468...17,799,008
Ensembl chr 9:17,784,468...17,799,005
JBrowse link
G Slc29a2 solute carrier family 29 member 2 ISO (PMID:9396714)
UniProtKB:Q9JIM1 (MGI:5902903|PMID:28069792)
RGD PMID:9396714, PMID:28069792 MGI:5902903 NCBI chr 1:220,306,622...220,314,631
Ensembl chr 1:220,400,855...220,407,189
Ensembl chr 1:220,400,855...220,407,189
JBrowse link
cytidine transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc28a1 solute carrier family 28 member 1 ISO
IBA
IEA
ISS
(PMID:21998139)
PMID:21873635
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21998139, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 1:142,948,942...142,992,410
Ensembl chr 1:142,950,540...142,992,615
JBrowse link
inosine transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc28a2 solute carrier family 28 member 2 ISO
IEA
(PMID:10087507)
GO_REF:0000107
RGD
Ensembl
PMID:10087507 GO_REF:0000107 NCBI chr 3:114,355,003...114,647,382
Ensembl chr 3:114,355,798...114,647,382
JBrowse link
nucleoside transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc28a1 solute carrier family 28 member 1 ISO
IEA
IBA
(PMID:22492015)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:22492015, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:142,948,942...142,992,410
Ensembl chr 1:142,950,540...142,992,615
JBrowse link
G Slc28a2 solute carrier family 28 member 2 IEA
IBA
ISO
GO_REF:0000002
PMID:21873635
(PMID:10087507), (PMID:22492015)
InterPro
RGD
PMID:10087507, PMID:22492015, PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 3:114,355,003...114,647,382
Ensembl chr 3:114,355,798...114,647,382
JBrowse link
G Slc28a3 solute carrier family 28 member 3 ISO
IBA
(PMID:22492015)
PMID:21873635
RGD PMID:22492015, PMID:21873635 RGD:13792537 NCBI chr17:6,459,024...6,509,761
Ensembl chr17:6,459,056...6,509,799
JBrowse link
G Slc29a1 solute carrier family 29 member 1 ISO (PMID:9396714) RGD PMID:9396714 NCBI chr 9:17,784,468...17,799,008
Ensembl chr 9:17,784,468...17,799,005
JBrowse link
G Slc29a2 solute carrier family 29 member 2 ISO (PMID:9396714) RGD PMID:9396714 NCBI chr 1:220,306,622...220,314,631
Ensembl chr 1:220,400,855...220,407,189
Ensembl chr 1:220,400,855...220,407,189
JBrowse link
G Slc29a3 solute carrier family 29 member 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:30,289,527...30,327,343
Ensembl chr20:30,287,424...30,327,361
JBrowse link
G Slc29a4 solute carrier family 29 member 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:13,914,114...13,924,511
Ensembl chr12:13,914,114...13,924,531
JBrowse link
positive regulation of nucleoside transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA RGD PMID:15024061 RGD:1625258 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852
JBrowse link
purine nucleoside transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc28a2 solute carrier family 28 member 2 ISO
IEA
(PMID:10087507)
GO_REF:0000107
RGD
Ensembl
PMID:10087507 GO_REF:0000107 NCBI chr 3:114,355,003...114,647,382
Ensembl chr 3:114,355,798...114,647,382
JBrowse link
G Slc28a3 solute carrier family 28 member 3 IEA
ISO
IBA
GO_REF:0000107
(MGI:2137024|PMID:11032837)
PMID:21873635
Ensembl
RGD
PMID:11032837, PMID:21873635 GO_REF:0000107, MGI:2137024, RGD:13792537 NCBI chr17:6,459,024...6,509,761
Ensembl chr17:6,459,056...6,509,799
JBrowse link
G Slc29a1 solute carrier family 29 member 1 ISO (PMID:9396714)
(MGI:5902903|PMID:28069792)
RGD PMID:9396714, PMID:28069792 MGI:5902903 NCBI chr 9:17,784,468...17,799,008
Ensembl chr 9:17,784,468...17,799,005
JBrowse link
G Slc29a2 solute carrier family 29 member 2 ISO (PMID:9396714)
UniProtKB:Q9JIM1 (MGI:5902903|PMID:28069792)
RGD PMID:9396714, PMID:28069792 MGI:5902903 NCBI chr 1:220,306,622...220,314,631
Ensembl chr 1:220,400,855...220,407,189
Ensembl chr 1:220,400,855...220,407,189
JBrowse link
pyrimidine nucleoside transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc28a3 solute carrier family 28 member 3 IBA
ISO
PMID:21873635
(MGI:2137024|PMID:11032837)
RGD PMID:11032837, PMID:21873635 MGI:2137024, RGD:13792537 NCBI chr17:6,459,024...6,509,761
Ensembl chr17:6,459,056...6,509,799
JBrowse link
uridine transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC108348052 equilibrative nucleoside transporter 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,399,926...220,407,935
Ensembl chr 1:220,400,855...220,407,189
Ensembl chr 1:220,400,855...220,407,189
JBrowse link
G Slc28a1 solute carrier family 28 member 1 ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:21998139), (PMID:22492015)
PMID:21873635
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21998139, PMID:22492015, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 1:142,948,942...142,992,410
Ensembl chr 1:142,950,540...142,992,615
JBrowse link
G Slc28a2 solute carrier family 28 member 2 ISO
IEA
(PMID:10087507), (PMID:22492015)
GO_REF:0000107
RGD
Ensembl
PMID:10087507, PMID:22492015 GO_REF:0000107 NCBI chr 3:114,355,003...114,647,382
Ensembl chr 3:114,355,798...114,647,382
JBrowse link
G Slc28a3 solute carrier family 28 member 3 ISO
IEA
(PMID:22492015)
GO_REF:0000107
RGD
Ensembl
PMID:22492015 GO_REF:0000107 NCBI chr17:6,459,024...6,509,761
Ensembl chr17:6,459,056...6,509,799
JBrowse link
G Slc29a1 solute carrier family 29 member 1 IMP
IBA
ISO
PMID:21873635
(PMID:9396714)
RGD PMID:9396714, PMID:19135251, PMID:21873635 RGD:2316929, RGD:13792537 NCBI chr 9:17,784,468...17,799,008
Ensembl chr 9:17,784,468...17,799,005
JBrowse link
G Slc29a2 solute carrier family 29 member 2 IMP
IBA
ISO
PMID:21873635
(PMID:9396714)
RGD PMID:9396714, PMID:19135251, PMID:21873635 RGD:2316929, RGD:13792537 NCBI chr 1:220,306,622...220,314,631
Ensembl chr 1:220,400,855...220,407,189
Ensembl chr 1:220,400,855...220,407,189
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          nitrogen compound transport 2118
            nucleobase-containing compound transport 229
              nucleoside transport 9
                adenosine transport + 3
                inosine transport + 1
                intracellular nucleoside transport 0
                negative regulation of nucleoside transport + 0
                nicotinamide riboside transport 0
                nucleoside transmembrane transport + 7
                positive regulation of nucleoside transport + 1
                pyrimidine nucleoside transport + 6
                regulation of nucleoside transport + 1
                xanthosine transport 0
Path 2
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          ion transport 3500
            anion transport 2681
              organic substance transport 2558
                nucleobase-containing compound transport 229
                  nucleoside transport 9
                    adenosine transport + 3
                    inosine transport + 1
                    intracellular nucleoside transport 0
                    negative regulation of nucleoside transport + 0
                    nicotinamide riboside transport 0
                    nucleoside transmembrane transport + 7
                    positive regulation of nucleoside transport + 1
                    pyrimidine nucleoside transport + 6
                    regulation of nucleoside transport + 1
                    xanthosine transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.