Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:choline transport
go back to main search page
Accession:GO:0015871 term browser browse the term
Definition:The directed movement of choline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.


show annotations for term's descendants           Sort by:
 
choline transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psen1 presenilin 1 ISO MGI:MGI:1930937 (MGI:MGI:3698892|PMID:17196556) RGD PMID:17196556 MGI:MGI:3698892 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Scn4a sodium voltage-gated channel alpha subunit 4 IMP RGD PMID:20926383 RGD:7243169 NCBI chr10:94,505,026...94,557,803
Ensembl chr10:94,505,026...94,557,764
JBrowse link
G Sec14l1 SEC14-like lipid binding 1 ISO (PMID:17092608) RGD PMID:17092608 NCBI chr10:106,065,712...106,112,859
Ensembl chr10:106,065,712...106,112,857
JBrowse link
G Slc22a2 solute carrier family 22 member 2 IEA
ISO
GO_REF:0000108
GO_REF:0000107
(PMID:9687576)
GOC
Ensembl
RGD
PMID:9687576 GO_REF:0000107, GO_REF:0000108 NCBI chr 1:48,318,025...48,360,219
Ensembl chr 1:48,317,995...48,360,261
JBrowse link
G Slc44a1 solute carrier family 44 member 1 IEA
IBA
ISO
IMP
GO_REF:0000107
PMID:21873635
(MGI:MGI:3055690|PMID:15474312), (MGI:MGI:6383289|PMID:19519661)
(PMID:16319125), (PMID:20410607)
Ensembl
RGD
PMID:15474312, PMID:16319125, PMID:19519661, PMID:20410607, PMID:21873635, PMID:19519661 GO_REF:0000107, MGI:MGI:3055690, MGI:MGI:6383289, RGD:13792537, RGD:15090833 NCBI chr 5:70,243,643...70,424,115
Ensembl chr 5:70,245,843...70,424,112
JBrowse link
G Slc44a2 solute carrier family 44 member 2 ISO
IBA
(PMID:20410607)
PMID:21873635
RGD PMID:20410607, PMID:21873635 RGD:13792537 NCBI chr 8:22,351,277...22,385,869
Ensembl chr 8:22,368,745...22,385,864
JBrowse link
G Slc44a4 solute carrier family 44, member 4 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:23651124), (PMID:28013291)
UniProt
RGD
PMID:23651124, PMID:28013291, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:4,593,389...4,609,641
Ensembl chr20:4,593,389...4,609,631
JBrowse link
G Slc5a7 solute carrier family 5 member 7 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:MGI:3045463 (MGI:MGI:3044863|PMID:15173594), (MGI:MGI:3698892|PMID:17196556)
Ensembl
RGD
PMID:15173594, PMID:17196556, PMID:21873635 GO_REF:0000107, MGI:MGI:3044863, MGI:MGI:3698892, RGD:13792537 NCBI chr 9:5,294,377...5,330,822
Ensembl chr 9:5,294,381...5,330,815
JBrowse link
G Slc6a8 solute carrier family 6 member 8 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:157,129,987...157,139,321
Ensembl chr  X:157,129,987...157,139,291
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    localization 6486
      establishment of localization 4918
        transport 4774
          nitrogen compound transport 2181
            choline transport 9
Path 2
Term Annotations click to browse term
  biological_process 20014
    localization 6486
      establishment of localization 4918
        transport 4774
          ion transport 1783
            cation transport 1282
              organic cation transport 67
                choline transport 9
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.