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ONTOLOGY REPORT - ANNOTATIONS


Term:carbohydrate biosynthetic process
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Accession:GO:0016051 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.
Synonyms:exact_synonym: anabolic carbohydrate metabolic process;   anabolic carbohydrate metabolism;   carbohydrate anabolism;   carbohydrate biosynthesis;   carbohydrate formation;   carbohydrate synthesis
 alt_id: GO:0006093


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carbohydrate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B3gat2 beta-1,3-glucuronyltransferase 2 JBrowse link 9 29,984,077 30,068,649 RGD:632232
G Chst10 carbohydrate sulfotransferase 10 JBrowse link 9 45,528,928 45,559,365 RGD:1600115
G Chst11 carbohydrate sulfotransferase 11 JBrowse link 7 26,641,856 26,890,503 RGD:1600115
G Chst12 carbohydrate sulfotransferase 12 JBrowse link 12 16,199,975 16,218,404 RGD:1600115
G Chst13 carbohydrate sulfotransferase 13 JBrowse link 4 122,223,846 122,244,848 RGD:1600115
G Chst14 carbohydrate sulfotransferase 14 JBrowse link 3 110,734,105 110,736,162 RGD:1600115
G Chst8 carbohydrate sulfotransferase 8 JBrowse link 1 90,542,095 90,685,257 RGD:1600115
G Chst9 carbohydrate sulfotransferase 9 JBrowse link 18 6,833,408 7,115,815 RGD:1600115
G Nans N-acetylneuraminate synthase JBrowse link 5 62,109,352 62,126,492 RGD:1600115
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 JBrowse link 17 80,960,785 81,002,830 RGD:1624291
cellular polysaccharide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ext1 exostosin glycosyltransferase 1 JBrowse link 7 92,605,008 92,881,392 RGD:1624291
G Ext2 exostosin glycosyltransferase 2 JBrowse link 3 82,602,784 82,734,557 RGD:1624291
G Fut9 fucosyltransferase 9 JBrowse link 5 40,032,855 40,237,591 RGD:1600115
RGD:1624291
chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 JBrowse link 16 22,704,318 23,075,071 RGD:1624291
extracellular polysaccharide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Has1 hyaluronan synthase 1 JBrowse link 1 59,720,612 59,732,409 RGD:1624291
RGD:13792537
G Has2 hyaluronan synthase 2 JBrowse link 7 96,438,046 96,464,049 RGD:1624291
RGD:13792537
RGD:1600115
G Has3 hyaluronan synthase 3 JBrowse link 19 39,063,298 39,077,745 RGD:1624291
RGD:13792537
fructose biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sord sorbitol dehydrogenase JBrowse link 3 114,176,127 114,207,368 RGD:1624291
gluconeogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07052465.1 RGD:13792537
G AC094212.1 RGD:1600115
RGD:13792537
G Atf3 activating transcription factor 3 JBrowse link 13 109,817,892 109,849,632 RGD:1624291
G Atf4 activating transcription factor 4 JBrowse link 7 121,480,723 121,482,781 RGD:1624291
G Crtc2 CREB regulated transcription coactivator 2 JBrowse link 2 189,615,928 189,625,646 RGD:1624291
RGD:1600115
G Cry1 cryptochrome circadian regulator 1 JBrowse link 7 24,534,593 24,634,098 RGD:1624291
RGD:1600115
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:2302795
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:2302851
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2302970
G Fbp2 fructose-bisphosphatase 2 JBrowse link 17 372,554 389,918 RGD:2302851
RGD:13792537
RGD:1600115
RGD:2302970
G G6pc glucose-6-phosphatase, catalytic subunit JBrowse link 10 89,286,009 89,296,213 RGD:728661
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2302970
RGD:2302851
RGD:2302850
G G6pc3 glucose 6 phosphatase catalytic subunit 3 JBrowse link 10 90,134,193 90,138,425 RGD:2302850
RGD:13792537
RGD:1600115
RGD:2302970
RGD:2302851
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link 4 157,676,336 157,680,322 RGD:2302795
RGD:13792662
G Gpd1 glycerol-3-phosphate dehydrogenase 1 JBrowse link 7 141,368,928 141,377,931 RGD:1624291
G Gpd2 glycerol-3-phosphate dehydrogenase 2 JBrowse link 3 43,223,892 43,359,069 RGD:1624291
RGD:1600115
G Gpi glucose-6-phosphate isomerase JBrowse link 1 90,063,411 90,091,287 RGD:13792537
G LOC100911515 triosephosphate isomerase-like JBrowse link 9 20,213,596 20,217,279 RGD:1600115
G Pc pyruvate carboxylase JBrowse link 1 219,759,157 219,859,854 RGD:2302851
RGD:13792537
RGD:1600115
RGD:2302971
G Pck1 phosphoenolpyruvate carboxykinase 1 JBrowse link 3 171,213,936 171,219,885 RGD:625518
RGD:1624291
RGD:13792537
RGD:8553288
RGD:1600115
RGD:2302971
RGD:2302970
RGD:2302851
RGD:2302850
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) JBrowse link 15 34,216,735 34,224,357 RGD:2302851
RGD:13792537
RGD:2302971
RGD:2302970
G Per2 period circadian regulator 2 JBrowse link 9 98,555,154 98,597,362 RGD:1624291
RGD:1600115
G Pgam2 phosphoglycerate mutase 2 JBrowse link 14 86,045,005 86,047,116 RGD:2302795
G Pgk1 phosphoglycerate kinase 1 JBrowse link X 77,263,399 77,279,373 RGD:2302795
RGD:13792537
RGD:2302860
G Pgk2 phosphoglycerate kinase 2 JBrowse link 9 24,095,774 24,097,340 RGD:13792537
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:9585757
G Rbp4 retinol binding protein 4 JBrowse link 1 256,806,476 256,813,678 RGD:1624291
G RGD1560402 similar to Phosphoglycerate kinase 1 JBrowse link 2 42,726,747 42,728,100 RGD:13792537
G Sds serine dehydratase JBrowse link 12 41,620,429 41,627,741 RGD:633956
RGD:1600115
G Slc39a14 solute carrier family 39 member 14 JBrowse link 15 51,982,872 52,029,841 RGD:1624291
G Tpi1 triosephosphate isomerase 1 JBrowse link 4 157,328,375 157,331,905 RGD:1600115
RGD:13792537
glycerol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link 1 263,246,248 263,269,762 RGD:8553472
RGD:1624291
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:5128556
G Pdxp pyridoxal phosphatase JBrowse link 7 120,140,460 120,145,908 RGD:13792537
G Pgp phosphoglycolate phosphatase JBrowse link 10 13,836,105 13,838,731 RGD:10679995
RGD:13792537
RGD:1624291
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pck1 phosphoenolpyruvate carboxykinase 1 JBrowse link 3 171,213,936 171,219,885 RGD:8553288
RGD:13792537
RGD:1624291
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) JBrowse link 15 34,216,735 34,224,357 RGD:13792537
glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1624291
RGD:1600115
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase JBrowse link 2 219,788,234 219,843,189 RGD:1600115
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:8553850
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1600115
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link 1 5,448,958 5,571,512 RGD:1624291
G Gbe1 1,4-alpha-glucan branching enzyme 1 JBrowse link 11 7,210,169 7,485,895 RGD:1642743
RGD:13792537
RGD:1600115
RGD:1624291
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:1581879
G Gyg1 glycogenin 1 JBrowse link 2 104,916,734 104,958,219 RGD:2303736
RGD:1624291
RGD:1600115
RGD:2304070
G Gys1 glycogen synthase 1 JBrowse link 1 101,427,195 101,447,092 RGD:2303748
RGD:13792537
RGD:1624291
RGD:1600115
RGD:1642743
G Gys2 glycogen synthase 2 JBrowse link 4 176,638,632 176,679,805 RGD:1582633
RGD:13792537
RGD:1624291
RGD:8554840
RGD:8554625
RGD:1600115
RGD:1642743
RGD:2304128
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 JBrowse link 17 18,059,382 18,060,572 RGD:1624291
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Per2 period circadian regulator 2 JBrowse link 9 98,555,154 98,597,362 RGD:1624291
RGD:1600115
G Phkg1 phosphorylase kinase catalytic subunit gamma 1 JBrowse link 12 30,450,431 30,464,314 RGD:1600115
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 JBrowse link 1 199,019,298 199,032,053 RGD:1600115
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C JBrowse link 1 255,371,830 255,376,833 RGD:1624291
RGD:1600115
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 JBrowse link 9 81,999,368 82,008,620 RGD:1624291
G Ptges3 prostaglandin E synthase 3 JBrowse link 7 2,479,267 2,497,024 RGD:1624291
G Ugp2 UDP-glucose pyrophosphorylase 2 JBrowse link 14 106,208,174 106,249,322 RGD:1624291
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ext1 exostosin glycosyltransferase 1 JBrowse link 7 92,605,008 92,881,392 RGD:1624291
G Ext2 exostosin glycosyltransferase 2 JBrowse link 3 82,602,784 82,734,557 RGD:1624291
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 JBrowse link 2 250,467,428 250,600,517 RGD:1624291
RGD:13792537
G Ndst1 N-deacetylase and N-sulfotransferase 1 JBrowse link 18 55,951,497 56,014,107 RGD:13792537
G Ndst2 N-deacetylase and N-sulfotransferase 2 JBrowse link 15 3,995,797 4,006,491 RGD:13792537
G Ndst3 N-deacetylase and N-sulfotransferase 3 JBrowse link 2 227,736,491 227,903,657 RGD:1624291
RGD:13792537
G Ndst4 N-deacetylase and N-sulfotransferase 4 JBrowse link 2 229,170,781 229,496,732 RGD:13792537
G NEWGENE_1304700 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 JBrowse link 15 3,750,058 3,760,616 RGD:13792537
hexose biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chst15 carbohydrate sulfotransferase 15 JBrowse link 1 204,243,396 204,328,960 RGD:1624291
RGD:1600115
inositol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Impa1 inositol monophosphatase 1 JBrowse link 2 93,675,203 93,696,355 RGD:1600115
G Impa2 inositol monophosphatase 2 JBrowse link 18 63,016,577 63,050,123 RGD:1600115
G Isyna1 inositol-3-phosphate synthase 1 JBrowse link 16 20,589,497 20,592,333 RGD:1600115
RGD:13792537
L-ascorbic acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1a1 aldo-keto reductase family 1 member A1 JBrowse link 5 135,482,068 135,498,693 RGD:13825440
RGD:1624291
G Gsto1 glutathione S-transferase omega 1 JBrowse link 1 267,607,437 267,617,387 RGD:70644
G Gulo gulonolactone (L-) oxidase JBrowse link 15 42,671,206 42,693,711 RGD:1600115
G Rgn regucalcin JBrowse link X 1,833,484 1,848,904 RGD:1624291
RGD:13792537
RGD:1600115
lactose biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B4galt1 beta-1,4-galactosyltransferase 1 JBrowse link 5 57,121,768 57,168,610 RGD:1624291
RGD:1600115
G Lalba lactalbumin, alpha JBrowse link 7 140,088,420 140,096,347 RGD:1600115
negative regulation of gluconeogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:1624291
RGD:1600115
G C1qtnf12 C1q and TNF related 12 JBrowse link 5 173,390,901 173,395,276 RGD:1624291
RGD:13792537
G C1qtnf3 C1q and TNF related 3 JBrowse link 2 60,920,160 60,942,586 RGD:1624291
G Clk2 CDC-like kinase 2 JBrowse link 2 188,476,789 188,488,809 RGD:1624291
G Cry1 cryptochrome circadian regulator 1 JBrowse link 7 24,534,593 24,634,098 RGD:1600115
RGD:1624291
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:1624291
G Erfe erythroferrone JBrowse link 9 98,505,136 98,513,005 RGD:13792537
G Fam3a FAM3 metabolism regulating signaling molecule A JBrowse link X 156,319,687 156,328,974 RGD:1600115
G Fam3c FAM3 metabolism regulating signaling molecule C JBrowse link 4 49,388,962 49,439,892 RGD:1600115
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:1600115
RGD:1624291
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:2306940
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
G Lepr leptin receptor JBrowse link 5 120,503,475 120,682,281 RGD:1624291
G LOC259246 alpha-2u globulin PGCL1 RGD:1600115
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase JBrowse link 14 82,664,248 82,697,673 RGD:1600115
G Mst1 macrophage stimulating 1 JBrowse link 8 116,857,716 116,862,286 RGD:1624291
G Pgp phosphoglycolate phosphatase JBrowse link 10 13,836,105 13,838,731 RGD:10679995
RGD:1624291
G Serpina12 serpin family A member 12 JBrowse link 6 127,696,501 127,711,238 RGD:1624291
RGD:1600115
G Sik1 salt-inducible kinase 1 JBrowse link 20 10,670,747 10,680,279 RGD:1624291
RGD:1600115
G Soga1 suppressor of glucose, autophagy associated 1 JBrowse link 3 153,130,268 153,188,909 RGD:1624291
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 JBrowse link 1 21,748,201 21,813,205 RGD:1624291
RGD:1600115
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 JBrowse link 4 118,852,046 118,901,583 RGD:1625425
G Grb10 growth factor receptor bound protein 10 JBrowse link 14 92,021,851 92,122,249 RGD:8553640
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
RGD:13792537
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:11529553
G Pask PAS domain containing serine/threonine kinase JBrowse link 9 100,450,595 100,479,719 RGD:1624291
RGD:13792537
negative regulation of hyaluronan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 JBrowse link 1 100,896,582 100,926,443 RGD:1624291
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1600115
RGD:1624291
G Smpd3 sphingomyelin phosphodiesterase 3 JBrowse link 19 38,237,963 38,321,572 RGD:1624291
RGD:1600115
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
G Prkg1 protein kinase cGMP-dependent 1 JBrowse link 1 248,982,039 250,300,952 RGD:7777104
oligosaccharide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) JBrowse link 2 166,226,736 166,255,978 RGD:1624291
G B3galt1 Beta-1,3-galactosyltransferase 1 JBrowse link 3 53,699,409 54,269,612 RGD:1624291
G B3galt2 Beta-1,3-galactosyltransferase 2 JBrowse link 13 60,435,946 60,444,957 RGD:1624291
G B4galt1 beta-1,4-galactosyltransferase 1 JBrowse link 5 57,121,768 57,168,610 RGD:1302270
RGD:1624291
G Mgat2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase JBrowse link 6 91,476,698 91,479,187 RGD:1600115
G Mpdu1 mannose-P-dolichol utilization defect 1 JBrowse link 10 56,261,636 56,267,213 RGD:1624291
RGD:13792537
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 JBrowse link 19 43,273,251 43,324,265 RGD:1624291
RGD:1600115
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 JBrowse link 8 36,264,741 36,314,811 RGD:1624291
G St6galnac1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 JBrowse link 10 105,713,305 105,723,700 RGD:1624291
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 JBrowse link 2 258,025,177 259,150,709 RGD:1624291
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 JBrowse link 3 11,620,050 11,641,460 RGD:1624291
pentose biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:1624291
G Pgd phosphogluconate dehydrogenase JBrowse link 5 165,966,128 165,982,327 RGD:1624291
poly-N-acetyllactosamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) JBrowse link 2 166,226,736 166,255,978 RGD:13792537
G B3galt1 Beta-1,3-galactosyltransferase 1 JBrowse link 3 53,699,409 54,269,612 RGD:13792537
G B3galt2 Beta-1,3-galactosyltransferase 2 JBrowse link 13 60,435,946 60,444,957 RGD:13792537
G B3galt5 Beta-1,3-galactosyltransferase 5 JBrowse link 11 36,638,067 36,683,915 RGD:13792537
G B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 JBrowse link 14 107,592,336 107,617,189 RGD:1624291
RGD:13792537
G B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 JBrowse link 16 20,123,948 20,133,482 RGD:1624291
RGD:13792537
G B3gnt4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 JBrowse link 12 38,503,361 38,506,793 RGD:1624291
RGD:13792537
G B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 JBrowse link 1 163,143,027 163,149,496 RGD:13792537
G B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 JBrowse link 9 93,326,283 93,330,234 RGD:13792537
G B3gnt8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 JBrowse link 1 82,419,264 82,422,852 RGD:1624291
RGD:13792537
G B3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 JBrowse link 19 37,208,061 37,212,400 RGD:13792537
G B4galt5 beta-1,4-galactosyltransferase 5 JBrowse link 3 164,039,731 164,055,561 RGD:1624291
G B4gat1 beta-1,4-glucuronyltransferase 1 JBrowse link 1 220,322,854 220,325,076 RGD:1624291
polysaccharide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ndst1 N-deacetylase and N-sulfotransferase 1 JBrowse link 18 55,951,497 56,014,107 RGD:1624291
positive regulation of gluconeogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arpp19 cAMP-regulated phosphoprotein 19 JBrowse link 8 81,949,577 81,972,054 RGD:1624291
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1600115
RGD:1624291
G Dgat2 diacylglycerol O-acyltransferase 2 JBrowse link 1 164,113,459 164,143,818 RGD:10400884
G Foxo1 forkhead box O1 JBrowse link 2 141,451,234 141,527,016 RGD:1624291
G Gcg glucagon JBrowse link 3 48,442,635 48,451,650 RGD:1600115
RGD:1624291
G Gpt glutamic--pyruvic transaminase JBrowse link 7 117,759,083 117,761,932 RGD:11342811
G Gpt2 glutamic--pyruvic transaminase 2 JBrowse link 19 22,599,003 22,633,529 RGD:11342811
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:10445837
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:1624992
RGD:10445837
G Kat2a lysine acetyltransferase 2A JBrowse link 10 88,611,586 88,619,558 RGD:1624291
G Kat2b lysine acetyltransferase 2B JBrowse link 9 4,440,982 4,492,949 RGD:1624291
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:1624291
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A JBrowse link 6 125,040,803 125,083,496 RGD:1624291
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B JBrowse link 14 113,570,150 113,618,138 RGD:1624291
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:8554594
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 JBrowse link 18 63,415,298 63,489,240 RGD:1624291
RGD:1600115
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:9585757
RGD:1600115
RGD:1624291
G Stk11 serine/threonine kinase 11 JBrowse link 7 12,440,751 12,457,513 RGD:2291956
G Supt20h SPT20 homolog, SAGA complex component JBrowse link 2 143,892,609 143,925,733 RGD:1624291
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
G Wdr5 WD repeat domain 5 JBrowse link 3 6,061,892 6,080,724 RGD:1624291
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1624291
RGD:1600115
G C1qtnf2 C1q and TNF related 2 JBrowse link 10 29,067,102 29,084,035 RGD:1624291
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 JBrowse link 7 61,785,423 61,816,775 RGD:1624291
G Epm2aip1 EPM2A interacting protein 1 JBrowse link 8 119,524,039 119,531,387 RGD:1624291
RGD:13792537
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:12910990
RGD:1624291
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:1600115
RGD:1624291
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:1624291
RGD:1600115
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:1624291
RGD:1600115
G Irs1 insulin receptor substrate 1 JBrowse link 9 88,033,668 88,086,488 RGD:1624291
RGD:1600115
G Irs2 insulin receptor substrate 2 JBrowse link 16 83,824,515 83,848,569 RGD:1624291
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E JBrowse link 15 33,535,986 33,537,146 RGD:2306166
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G JBrowse link 17 29,566,032 29,570,294 RGD:1624291
G Pth parathyroid hormone JBrowse link 1 178,215,829 178,218,761 RGD:1624291
RGD:1600115
G Sorbs1 sorbin and SH3 domain containing 1 JBrowse link 1 259,373,921 259,502,108 RGD:1624291
positive regulation of hyaluronan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:1624291
G Has2 hyaluronan synthase 2 JBrowse link 7 96,438,046 96,464,049 RGD:9588629
RGD:9588632
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:1600115
RGD:1624291
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:1600115
RGD:1624291
G Ptger4 prostaglandin E receptor 4 JBrowse link 2 54,951,625 54,966,470 RGD:9588632
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcyap1r1 ADCYAP receptor type I JBrowse link 4 85,662,809 85,711,696 RGD:2315982
G Avpr1b arginine vasopressin receptor 1B JBrowse link 13 48,367,307 48,378,831 RGD:1624291
G Cd244 CD244 molecule JBrowse link 13 89,959,091 89,995,993 RGD:1624291
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor JBrowse link 1 48,076,761 48,108,218 RGD:2316794
G Ntsr1 neurotensin receptor 1 JBrowse link 3 175,982,313 176,046,345 RGD:9743897
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:9999203
G Pth parathyroid hormone JBrowse link 1 178,215,829 178,218,761 RGD:1624291
G Pth1r parathyroid hormone 1 receptor JBrowse link 8 118,984,531 119,012,803 RGD:8553376
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gper1 G protein-coupled estrogen receptor 1 JBrowse link 12 17,309,122 17,315,267 RGD:1600115
RGD:1624291
G Lhcgr luteinizing hormone/choriogonadotropin receptor JBrowse link 6 12,493,182 12,554,482 RGD:1624291
RGD:1600115
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:6902910
G P2ry1 purinergic receptor P2Y1 JBrowse link 2 151,314,818 151,320,312 RGD:8553380
G P2ry6 pyrimidinergic receptor P2Y6 JBrowse link 1 165,972,439 166,008,348 RGD:1624291
G Plcd1 phospholipase C, delta 1 JBrowse link 8 127,753,514 127,782,070 RGD:2300424
G Pou1f1 POU class 1 homeobox 1 JBrowse link 11 2,645,659 2,662,581 RGD:1624291
regulation of gluconeogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1624291
RGD:1600115
G Dgkq diacylglycerol kinase, theta JBrowse link 14 2,069,409 2,083,370 RGD:1624291
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:1600115
RGD:1624291
G Foxo1 forkhead box O1 JBrowse link 2 141,451,234 141,527,016 RGD:1624291
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:1624291
RGD:13792537
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:14700925
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:1624291
G LOC100911564 glycine N-methyltransferase-like JBrowse link 9 16,314,136 16,317,575 RGD:13792537
G Nln neurolysin JBrowse link 2 34,086,970 34,185,835 RGD:1624291
RGD:1600115
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:1624291
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 71,540,870 71,585,906 RGD:1624291
RGD:1600115
G Pdk2 pyruvate dehydrogenase kinase 2 JBrowse link 10 82,838,270 82,852,758 RGD:1600115
RGD:1624291
G Ranbp2 RAN binding protein 2 JBrowse link 20
20
28,027,054
28,365,538
28,076,664
28,375,676
RGD:1624291
G Sesn2 sestrin 2 JBrowse link 5 150,684,891 150,703,846 RGD:1624291
G Sirt7 sirtuin 7 JBrowse link 10 109,796,046 109,802,821 RGD:1600115
RGD:1624291
G Slc35b4 solute carrier family 35 member B4 JBrowse link 4 61,550,995 61,573,003 RGD:1624291
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1600115
RGD:1624291
regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1625611
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:2304267
G Ppp1cb protein phosphatase 1 catalytic subunit beta JBrowse link 6 23,548,507 23,581,136 RGD:2304267
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A JBrowse link 4 41,171,486 41,212,116 RGD:13792537
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B JBrowse link 16 60,415,192 60,427,498 RGD:2304267
RGD:13792537
RGD:2306167
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C JBrowse link 1 255,371,830 255,376,833 RGD:2306167
RGD:13792537
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D JBrowse link 3 173,950,613 173,953,684 RGD:2306167
RGD:13792537
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E JBrowse link 15 33,535,986 33,537,146 RGD:2306166
RGD:13792537
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F JBrowse link X 15,774,091 15,784,711 RGD:1624291
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G JBrowse link 17 29,566,032 29,570,294 RGD:13792537
regulation of hyaluronan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smpd3 sphingomyelin phosphodiesterase 3 JBrowse link 19 38,237,963 38,321,572 RGD:1624291
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1624291
RGD:1600115
sorbitol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b1 aldo-keto reductase family 1 member B JBrowse link 4 61,706,866 61,720,959 RGD:1626096
RGD:8548687
sucrose biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:13792537
G Fbp2 fructose-bisphosphatase 2 JBrowse link 17 372,554 389,918 RGD:13792537

Term paths to the root
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Term Annotations click to browse term
  biological_process 19858
    metabolic process 12096
      primary metabolic process 10749
        carbohydrate metabolic process 630
          carbohydrate biosynthetic process 209
            aldaric acid biosynthetic process + 0
            cellular carbohydrate biosynthetic process + 85
            monosaccharide biosynthetic process + 92
            oligosaccharide biosynthetic process + 14
            photosynthesis, dark reaction + 0
            polysaccharide biosynthetic process + 79
            regulation of carbohydrate biosynthetic process + 111
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.