Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:rhodopsin mediated signaling pathway
go back to main search page
Accession:GO:0016056 term browser browse the term
Definition:The series of molecular signals generated as a consequence of excitation of rhodopsin by a photon and the events that convert the absorbed photons into a cellular response.
Synonyms:exact_synonym: rhodopsin mediated phototransduction;   rhodopsin mediated signalling pathway;   rhodopsin signaling
 alt_id: GO:0009586


show annotations for term's descendants           Sort by:
 
rhodopsin mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 IMP RGD PMID:11931744 RGD:1599009 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 TAS RGD PMID:9147475 RGD:729748 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link
G Opn4 opsin 4 ISO (MGI:4438311|PMID:19793992) RGD PMID:19793992 MGI:4438311 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Pcp2 Purkinje cell protein 2 ISO MGI:3579782 (MGI:3817370|PMID:18768681) RGD PMID:18768681 MGI:3817370 NCBI chr12:2,172,378...2,174,674
Ensembl chr12:2,172,378...2,174,131
JBrowse link
G Rho rhodopsin IDA RGD PMID:8814134 RGD:6893595 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 ISO MGI:3586379 (MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:3584215 NCBI chr 6:102,356,498...102,372,618
Ensembl chr 6:102,356,492...102,372,611
JBrowse link
G Rs1 retinoschisin 1 ISO MGI:3056058 (MGI:3055638|PMID:15326152) RGD PMID:15326152 MGI:3055638 NCBI chr  X:35,749,957...35,777,243
Ensembl chr  X:35,749,957...35,777,243
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 ISO MGI:3054784|MGI:3054793 (MGI:3054118|PMID:15365173), (MGI:3054134|PMID:15365178) RGD PMID:15365173, PMID:15365178 MGI:3054118, MGI:3054134 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 IEA
ISO
ISS
GO_REF:0000107
(PMID:15946941)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15946941 GO_REF:0000024, GO_REF:0000107 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    signaling 7579
      signal transduction 7010
        phototransduction 27
          rhodopsin mediated signaling pathway 8
            adaptation of rhodopsin mediated signaling 2
            light-induced release of internally sequestered calcium ion 0
            phospholipase C-activating rhodopsin mediated signaling pathway 0
            regulation of rhodopsin mediated signaling pathway + 2
Path 2
Term Annotations click to browse term
  biological_process 20020
    response to stimulus 10580
      response to abiotic stimulus 1514
        response to radiation 535
          response to light stimulus 347
            detection of light stimulus 51
              detection of visible light 41
                phototransduction, visible light 10
                  rhodopsin mediated signaling pathway 8
                    adaptation of rhodopsin mediated signaling 2
                    light-induced release of internally sequestered calcium ion 0
                    phospholipase C-activating rhodopsin mediated signaling pathway 0
                    regulation of rhodopsin mediated signaling pathway + 2
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.