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ONTOLOGY REPORT - ANNOTATIONS


Term:endosomal transport
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Accession:GO:0016197 term browser browse the term
Definition:The directed movement of substances mediated by an endosome, a membrane-bounded organelle that carries materials enclosed in the lumen or located in the endosomal membrane.
Synonyms:exact_synonym: endosome localisation
 related_synonym: endosome localization;   endosome transport
 alt_id: GO:0032439


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endosomal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:14747463) RGD PMID:14747463 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ISO (PMID:12388557) RGD PMID:12388557 NCBI chr 7:70,360,199...70,377,422
Ensembl chr 7:70,364,813...70,377,422
JBrowse link
G Alms1 ALMS1, centrosome and basal body associated protein ISO (PMID:22693585) RGD PMID:22693585 NCBI chr 4:117,371,544...117,472,310
Ensembl chr 4:117,371,659...117,472,198
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 ISO MGI:MGI:3612978|MGI:MGI:3653518 (MGI:MGI:3611988|PMID:16321985), (MGI:MGI:3652645|PMID:16769894) RGD PMID:16321985, PMID:16769894 MGI:MGI:3611988, MGI:MGI:3652645 NCBI chr 9:65,961,361...66,034,396
Ensembl chr 9:65,961,346...66,033,871
JBrowse link
G Ankfy1 ankyrin repeat and FYVE domain containing 1 ISO (PMID:24102721) RGD PMID:24102721 NCBI chr10:59,259,955...59,331,669
Ensembl chr10:59,259,955...59,331,669
JBrowse link
G Anxa8 annexin A8 ISO
IBA
(PMID:18923148)
PMID:21873635
RGD PMID:18923148, PMID:21873635 RGD:13792537 NCBI chr16:10,417,174...10,432,388
Ensembl chr16:10,417,185...10,432,393
JBrowse link
G Ap5b1 adaptor related protein complex 5 subunit beta 1 ISO
IBA
ISS
(PMID:22022230)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22022230, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:220,948,318...220,952,349
Ensembl chr 1:220,948,331...220,952,391
JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 ISO
IBA
ISS
(PMID:22022230)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22022230, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:25,933,483...25,955,745
Ensembl chr15:25,933,483...25,955,745
JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 ISO
IBA
(PMID:22022230)
PMID:21873635
RGD PMID:22022230, PMID:21873635 RGD:13792537 NCBI chr 3:123,754,035...123,757,349
Ensembl chr 3:123,754,057...123,757,359
JBrowse link
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 ISO (PMID:22022230) RGD PMID:22022230 NCBI chr12:14,161,998...14,175,997 JBrowse link
G Arhgap1 Rho GTPase activating protein 1 ISO (PMID:16380373) RGD PMID:16380373 NCBI chr 3:80,555,196...80,576,881
Ensembl chr 3:80,555,196...80,576,856
JBrowse link
G Arl8b ADP-ribosylation factor like GTPase 8B ISO (MGI:MGI:5609900|PMID:24841562) RGD PMID:24841562 MGI:MGI:5609900 NCBI chr 4:140,837,745...140,881,866
Ensembl chr 4:140,837,745...140,881,865
JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:3,342,630...3,346,238
Ensembl chr 7:3,342,630...3,346,238
JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:263,913,901...263,920,989
Ensembl chr 1:263,913,854...263,920,962
JBrowse link
G Caly calcyon neuron-specific vesicular protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:212,537,851...212,549,040
Ensembl chr 1:212,537,848...212,549,477
JBrowse link
G Clec16a C-type lectin domain containing 16A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Coro1c coronin 1C ISO (PMID:30220460) RGD PMID:30220460 NCBI chr12:48,481,741...48,554,054
Ensembl chr12:48,481,750...48,554,052
JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19651892)
Ensembl
UniProt
RGD
PMID:19651892 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:22,296,128...22,316,894
Ensembl chr 6:22,296,128...22,316,894
JBrowse link
G Ehd1 EH-domain containing 1 ISO
IBA
(MGI:MGI:2135811|PMID:11389441)
PMID:21873635
RGD PMID:11389441, PMID:21873635 MGI:MGI:2135811, RGD:13792537 NCBI chr 1:221,644,867...221,667,242
Ensembl chr 1:221,644,867...221,667,239
JBrowse link
G Ehd2 EH-domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:77,847,599...77,865,870
Ensembl chr 1:77,847,600...77,865,870
JBrowse link
G Ehd3 EH-domain containing 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:25,076,012...25,102,457
Ensembl chr 6:25,074,955...25,100,977
JBrowse link
G Ehd4 EH-domain containing 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,877,853...111,941,841
Ensembl chr 3:111,877,853...111,941,841
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:19,127,635...19,202,991
Ensembl chr16:19,127,724...19,203,003
JBrowse link
G Htt huntingtin ISO MGI:MGI:1857180 (MGI:MGI:3619161|PMID:11092755) RGD PMID:11092755 MGI:MGI:3619161 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Itsn1 intersectin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:31,943,119...32,069,249
Ensembl chr11:31,893,489...32,069,249
JBrowse link
G Itsn2 intersectin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:30,098,378...30,208,694
Ensembl chr 6:30,098,380...30,187,337
JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:4887551|PMID:19177150)
UniProt
RGD
PMID:19177150 GO_REF:0000024, MGI:MGI:4887551 NCBI chr 1:166,991,474...166,997,045
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G LOC100361543 RhoA activator C11orf59-like ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:37,261,428...37,262,470
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G Lrp2 LDL receptor related protein 2 IMP RGD PMID:9039057 RGD:1641882 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Mx2 MX dynamin like GTPase 2 ISO (PMID:20167191) RGD PMID:20167191 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950
JBrowse link
G Myo5b myosin Vb ISS
ISO
GO_REF:0000024
(PMID:21206382)
UniProt
RGD
PMID:21206382 GO_REF:0000024 NCBI chr18:70,426,865...70,729,985
Ensembl chr18:70,427,007...70,729,030
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:18299352, PMID:21873635 RGD:9850091, RGD:13792537 NCBI chr14:77,380,264...77,402,007
Ensembl chr14:77,380,262...77,401,996
JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:15,867,885...15,928,169
Ensembl chr10:15,867,887...15,928,169
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO
IEA
(PMID:16262731)
GO_REF:0000107
RGD
Ensembl
PMID:16262731 GO_REF:0000107 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
G Rab10 RAB10, member RAS oncogene family IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16641372)
Ensembl
UniProt
RGD
PMID:16641372 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:27,668,387...27,721,120
Ensembl chr 6:27,668,403...27,721,120
JBrowse link
G Rab13 RAB13, member RAS oncogene family ISO
ISS
(PMID:18779367)
GO_REF:0000024
RGD
UniProt
PMID:18779367 GO_REF:0000024 NCBI chr 2:189,581,209...189,586,358
Ensembl chr 2:189,581,644...189,586,338
JBrowse link
G Rab35 RAB35, member RAS oncogene family ISS
ISO
GO_REF:0000024
(PMID:16950109), (PMID:21951725)
UniProt
RGD
PMID:16950109, PMID:21951725 GO_REF:0000024 NCBI chr12:46,704,274...46,718,404
Ensembl chr12:46,704,275...46,718,355
JBrowse link
G Rassf9 Ras association domain family member 9 NAS
IEA
PMID:9837933
GO_REF:0000002
InterPro PMID:9837933 GO_REF:0000002, RGD:633607 NCBI chr 7:44,146,345...44,178,179
Ensembl chr 7:44,146,237...44,181,201
JBrowse link
G Reps1 RALBP1 associated Eps domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:13,262,049...13,298,347
Ensembl chr 1:13,212,324...13,298,347
JBrowse link
G Reps2 RALBP1 associated Eps domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:33,786,611...34,062,941
Ensembl chr  X:33,884,499...34,057,399
JBrowse link
G RGD1307100 similar to RIKEN cDNA D630029K19 ISO (PMID:30906834) RGD PMID:30906834 NCBI chr 2:123,555,742...123,766,675
Ensembl chr 2:123,555,673...123,766,676
JBrowse link
G Snap25 synaptosome associated protein 25 IDA RGD PMID:16481393 RGD:1581071 NCBI chr 3:129,697,408...129,788,417
Ensembl chr 3:129,599,353...129,788,400
JBrowse link
G Snx1 sorting nexin 1 IEP RGD PMID:11110793 RGD:68866 NCBI chr 8:71,745,687...71,786,182
Ensembl chr 8:71,745,896...71,784,551
JBrowse link
G Snx18 sorting nexin 18 ISO (PMID:22718350) RGD PMID:22718350 NCBI chr 2:45,454,782...45,480,798
Ensembl chr 2:45,454,782...45,480,798
JBrowse link
G Snx27 sorting nexin 27 IMP
ISO
IEA
PMID:17828261
(PMID:21300787)
GO_REF:0000002
MGI:MGI:4949192 (MGI:MGI:4948187|PMID:21300787)
RGD
InterPro
PMID:21300787, PMID:17828261 GO_REF:0000002, MGI:MGI:4948187, RGD:8554502 NCBI chr 2:195,738,613...195,821,608
Ensembl chr 2:195,738,619...195,821,608
JBrowse link
G Snx33 sorting nexin 33 ISO (PMID:22718350) RGD PMID:22718350 NCBI chr 8:61,584,656...61,596,055
Ensembl chr 8:61,584,656...61,595,032
JBrowse link
G Snx9 sorting nexin 9 ISO (PMID:22718350) RGD PMID:22718350 NCBI chr 1:46,780,142...46,826,250
Ensembl chr 1:46,779,860...46,825,830
JBrowse link
G Srl sarcalumenin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:11,240,135...11,284,325
Ensembl chr10:11,240,138...11,284,332
JBrowse link
G Tmcc1 transmembrane and coiled-coil domain family 1 ISO
IBA
(PMID:30220460)
PMID:21873635
RGD PMID:30220460, PMID:21873635 RGD:13792537 NCBI chr 4:147,920,987...148,048,852
Ensembl chr 4:147,921,724...148,048,726
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:122,947,887...122,969,543
Ensembl chr 3:122,947,913...122,969,541
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A IC
ISO
(PMID:10637304), (PMID:11559748) RGD PMID:10637304, PMID:11559748, PMID:11931639 RGD:2290289 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO (PMID:11563910) RGD PMID:11563910 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
G Was WASP actin nucleation promoting factor ISO (MGI:MGI:2387810|PMID:12147689) RGD PMID:12147689 MGI:MGI:2387810 NCBI chr  X:15,155,246...15,164,099
Ensembl chr  X:15,155,230...15,164,105
JBrowse link
G Washc1 WASH complex subunit 1 ISO
ISS
(MGI:MGI:4415646|PMID:19922875)
GO_REF:0000024
RGD
UniProt
PMID:19922875 GO_REF:0000024, MGI:MGI:4415646 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
G Washc4 WASH complex subunit 4 ISO
IBA
(PMID:20923837)
PMID:21873635
(MGI:MGI:4415646|PMID:19922875)
RGD PMID:19922875, PMID:20923837, PMID:21873635 MGI:MGI:4415646, RGD:13792537 NCBI chr 7:26,309,279...26,361,221
Ensembl chr 7:26,311,094...26,361,221
JBrowse link
G Washc5 WASH complex subunit 5 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:99,625,379...99,677,237
Ensembl chr 7:99,625,619...99,677,268
JBrowse link
G Zfyve16 zinc finger FYVE-type containing 16 ISO
IBA
(PMID:11546807)
PMID:21873635
RGD PMID:11546807, PMID:21873635 RGD:13792537 NCBI chr 2:22,060,879...22,105,822
Ensembl chr 2:22,062,050...22,105,710
JBrowse link
G Zfyve9 zinc finger FYVE-type containing 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:128,233,096...128,392,675
Ensembl chr 5:128,234,909...128,333,805
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd8 BTB domain containing 8 ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:6104538|PMID:29262337)
GO_REF:0000002
UniProt
RGD
InterPro
PMID:29262337 GO_REF:0000002, GO_REF:0000024, MGI:MGI:6104538 NCBI chr14:3,282,422...3,351,740
Ensembl chr14:3,284,089...3,300,200
JBrowse link
G Itsn1 intersectin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:31,943,119...32,069,249
Ensembl chr11:31,893,489...32,069,249
JBrowse link
G Itsn2 intersectin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:30,098,378...30,208,694
Ensembl chr 6:30,098,380...30,187,337
JBrowse link
early endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd3 EH-domain containing 3 IEA
ISO
GO_REF:0000107
(PMID:19139087)
Ensembl
RGD
PMID:19139087 GO_REF:0000107 NCBI chr 6:25,076,012...25,102,457
Ensembl chr 6:25,074,955...25,100,977
JBrowse link
G Lman1 lectin, mannose-binding, 1 NOT ISO (PMID:18287528) RGD PMID:18287528 NCBI chr18:61,683,377...61,707,344
Ensembl chr18:61,685,117...61,707,317
JBrowse link
G Rab6a RAB6A, member RAS oncogene family ISO
IEA
(PMID:17562788)
GO_REF:0000107
RGD
Ensembl
PMID:17562788 GO_REF:0000107 NCBI chr 1:165,624,973...165,664,201
Ensembl chr 1:165,625,058...165,664,192
JBrowse link
G Rbsn rabenosyn, RAB effector ISO (PMID:19139087) RGD PMID:19139087 NCBI chr 4:124,050,559...124,080,919
Ensembl chr 4:124,052,300...124,080,906
JBrowse link
G Snx1 sorting nexin 1 ISO
IBA
(PMID:15498486)
PMID:21873635
RGD PMID:15498486, PMID:21873635 RGD:13792537 NCBI chr 8:71,745,687...71,786,182
Ensembl chr 8:71,745,896...71,784,551
JBrowse link
G Snx2 sorting nexin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:48,132,386...48,173,974
Ensembl chr18:48,132,414...48,173,971
JBrowse link
G Snx8 sorting nexin 8 ISO (PMID:19782049) RGD PMID:19782049 NCBI chr12:16,340,917...16,389,500
Ensembl chr12:16,340,922...16,389,497
JBrowse link
G Stx5 syntaxin 5 ISO (PMID:17389686) RGD PMID:17389686 NCBI chr 1:224,939,497...224,955,658
Ensembl chr 1:224,939,497...224,955,657
JBrowse link
G Surf4 surfeit 4 NOT ISO (PMID:18287528) RGD PMID:18287528 NCBI chr 3:5,468,284...5,481,447
Ensembl chr 3:5,461,770...5,483,239
JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 NOT ISO (PMID:18287528) RGD PMID:18287528 NCBI chr17:9,560,735...9,565,249
Ensembl chr17:9,560,761...9,565,249
JBrowse link
G Trappc10 trafficking protein particle complex 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:11,168,298...11,228,634
Ensembl chr20:11,168,298...11,228,625
JBrowse link
endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acap2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 IMP PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr11:73,078,966...73,193,496
Ensembl chr11:73,078,982...73,191,132
JBrowse link
G Arf6 ADP-ribosylation factor 6 ISO
IDA
(PMID:10036235)
PMID:26446845
RGD PMID:10036235, PMID:26446845 RGD:11554955 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Arl4c ADP ribosylation factor like GTPase 4C ISO (PMID:19409876) RGD PMID:19409876 NCBI chr 9:95,783,651...95,787,092
Ensembl chr 9:95,786,508...95,787,094
JBrowse link
G Ccdc22 coiled-coil domain containing 22 ISS
ISO
GO_REF:0000024
(PMID:28892079)
UniProt
RGD
PMID:28892079 GO_REF:0000024 NCBI chr  X:15,742,978...15,754,925
Ensembl chr  X:15,742,978...15,754,925
JBrowse link
G Ccdc93 coiled-coil domain containing 93 ISS
ISO
GO_REF:0000024
(PMID:28892079)
UniProt
RGD
PMID:28892079 GO_REF:0000024 NCBI chr13:37,400,455...37,473,973
Ensembl chr13:37,400,476...37,468,840
JBrowse link
G Cmtm6 CKLF-like MARVEL transmembrane domain containing 6 ISO (PMID:28813417) RGD PMID:28813417 NCBI chr 8:122,789,208...122,807,560
Ensembl chr 8:122,789,453...122,807,560
JBrowse link
G Dennd1a DENN domain containing 1A ISO
IBA
(MGI:MGI:5751677|PMID:20159556)
PMID:21873635
RGD PMID:20159556, PMID:21873635 MGI:MGI:5751677, RGD:13792537 NCBI chr 3:22,061,120...22,501,502
Ensembl chr 3:22,058,400...22,500,765
JBrowse link
G Dennd1b DENN domain containing 1B ISO
IBA
(MGI:MGI:5751612|PMID:26774822)
PMID:21873635
RGD PMID:26774822, PMID:21873635 MGI:MGI:5751612, RGD:13792537 NCBI chr13:56,015,813...56,242,041
Ensembl chr13:56,015,901...56,236,677
JBrowse link
G Dennd1c DENN domain containing 1C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:9,976,015...9,982,349
Ensembl chr 9:9,970,209...9,982,295
JBrowse link
G Ehd1 EH-domain containing 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
UniProtKB:G5ECC3|UniProtKB:G5EEU7 (PMID:15020713), (PMID:17233914)
UniProt
RGD
PMID:15020713, PMID:17233914, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:221,644,867...221,667,242
Ensembl chr 1:221,644,867...221,667,239
JBrowse link
G Ehd2 EH-domain containing 2 ISO
IBA
ISS
UniProtKB:G5ECC3|UniProtKB:G5EEU7 (PMID:17233914)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:17233914, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:77,847,599...77,865,870
Ensembl chr 1:77,847,600...77,865,870
JBrowse link
G Ehd3 EH-domain containing 3 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:17233914)
Ensembl
UniProt
RGD
PMID:17233914, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 6:25,076,012...25,102,457
Ensembl chr 6:25,074,955...25,100,977
JBrowse link
G Ehd4 EH-domain containing 4 ISO
IBA
UniProtKB:G5ECC3|UniProtKB:G5EEU7 (PMID:17233914)
PMID:21873635
RGD PMID:17233914, PMID:21873635 RGD:13792537 NCBI chr 3:111,877,853...111,941,841
Ensembl chr 3:111,877,853...111,941,841
JBrowse link
G Eipr1 EARP complex and GARP complex interacting protein 1 IMP PMID:3172165 UniProt PMID:3172165 RGD:25671404 NCBI chr 6:48,021,771...48,135,241
Ensembl chr 6:48,021,771...48,135,241
JBrowse link
G Epg5 ectopic P-granules autophagy protein 5 homolog ISO MGI:MGI:5505596 (MGI:MGI:5488852|PMID:23479740) RGD PMID:23479740 MGI:MGI:5488852 NCBI chr18:74,299,965...74,397,115
Ensembl chr18:74,299,931...74,395,547
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 IMP RGD PMID:21832070 RGD:9685531 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb IDA RGD PMID:17680646 RGD:9588617 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 IDA PMID:26446845 UniProt PMID:26446845 RGD:11554955 NCBI chr10:104,137,655...104,156,576
Ensembl chr10:104,137,655...104,156,576
JBrowse link
G Lmtk2 lemur tyrosine kinase 2 ISO (PMID:18029400) RGD PMID:18029400 NCBI chr12:12,409,876...12,546,111
Ensembl chr12:12,409,876...12,546,111
JBrowse link
G LOC100911994 coiled-coil domain-containing protein 132-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:31,332,759...31,352,476
Ensembl chr 4:31,333,970...31,351,942
JBrowse link
G Micall2 MICAL-like 2 IEA
ISO
ISS
GO_REF:0000002
(MGI:MGI:3656449|PMID:16525024), (MGI:MGI:5508599|PMID:18094055)
GO_REF:0000024
InterPro
RGD
UniProt
PMID:16525024, PMID:18094055 GO_REF:0000002, GO_REF:0000024, MGI:MGI:3656449, MGI:MGI:5508599 NCBI chr12:16,988,013...17,016,794
Ensembl chr12:16,988,136...17,016,791
JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 ISO
IEA
(PMID:24821423)
GO_REF:0000107
RGD
Ensembl
PMID:24821423 GO_REF:0000107 NCBI chr 8:118,628,777...118,651,238
Ensembl chr 8:118,628,777...118,651,238
JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 ISO
IBA
(PMID:17394487)
PMID:21873635
RGD PMID:17394487, PMID:21873635 RGD:13792537 NCBI chr10:15,348,356...15,433,384
Ensembl chr10:15,349,888...15,381,691
JBrowse link
G Rab11fip4 RAB11 family interacting protein 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:66,942,363...67,051,672
Ensembl chr10:66,942,398...67,048,308
JBrowse link
G Rab13 RAB13, member RAS oncogene family ISO
ISS
(PMID:15528189)
(PMID:18094055)
GO_REF:0000024
(MGI:MGI:5508273|PMID:15528189)
RGD
UniProt
PMID:15528189, PMID:18094055 GO_REF:0000024, MGI:MGI:5508273 NCBI chr 2:189,581,209...189,586,358
Ensembl chr 2:189,581,644...189,586,338
JBrowse link
G Rab14 RAB14, member RAS oncogene family IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22595670)
Ensembl
UniProt
RGD
PMID:22595670 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:14,373,270...14,395,357
Ensembl chr 3:14,373,275...14,395,362
JBrowse link
G Rab17 RAB17, member RAS oncogene family ISO
IBA
(MGI:MGI:5486576|PMID:9490718)
PMID:21873635
RGD PMID:9490718, PMID:21873635 MGI:MGI:5486576, RGD:13792537 NCBI chr 9:98,118,907...98,131,883
Ensembl chr 9:98,118,908...98,131,883
JBrowse link
G Rab35 RAB35, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:46,704,274...46,718,404
Ensembl chr12:46,704,275...46,718,355
JBrowse link
G Rab8a RAB8A, member RAS oncogene family ISO (PMID:18094055) RGD PMID:18094055 NCBI chr16:19,355,047...19,376,776
Ensembl chr16:19,355,048...19,376,776
JBrowse link
G RGD1307100 similar to RIKEN cDNA D630029K19 ISO (PMID:30906834) RGD PMID:30906834 NCBI chr 2:123,555,742...123,766,675
Ensembl chr 2:123,555,673...123,766,676
JBrowse link
G Slc18a2 solute carrier family 18 member A2 IEP RGD PMID:20534840 RGD:5130935 NCBI chr 1:280,397,831...280,457,968
Ensembl chr 1:280,423,079...280,457,148
JBrowse link
G Snf8 SNF8 subunit of ESCRT-II ISO (PMID:17714434) RGD PMID:17714434 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
G Snx12 sorting nexin 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:70,989,822...71,127,330
Ensembl chr  X:70,989,822...71,127,278
JBrowse link
G Snx17 sorting nexin 17 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28892079)
UniProt
Ensembl
RGD
PMID:28892079 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:26,541,137...26,546,650
Ensembl chr 6:26,541,138...26,546,545
JBrowse link
G Snx3 sorting nexin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390
JBrowse link
G Snx4 sorting nexin 4 ISO (PMID:17994011) RGD PMID:17994011 NCBI chr11:70,693,381...70,753,620
Ensembl chr11:70,693,366...70,753,632
JBrowse link
G Stx6 syntaxin 6 ISO (PMID:25799061) RGD PMID:25799061 NCBI chr13:72,804,218...72,850,757
Ensembl chr13:72,804,218...72,852,967
JBrowse link
G Vps26c VPS26 endosomal protein sorting factor C ISO (PMID:28892079) RGD PMID:28892079 NCBI chr11:34,764,053...34,792,446
Ensembl chr11:34,764,721...34,791,993
JBrowse link
G Vps29 VPS29 retromer complex component ISO
ISS
(PMID:28892079)
GO_REF:0000024
RGD
UniProt
PMID:28892079 GO_REF:0000024 NCBI chr12:39,690,069...39,699,114
Ensembl chr12:39,690,069...39,699,113
JBrowse link
G Vps35l VPS35 endosomal protein sorting factor like ISO
IBA
ISS
(PMID:28892079)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:28892079, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:188,448,517...188,552,268
Ensembl chr 1:188,448,478...188,552,272
JBrowse link
G Vps50 VPS50 subunit of EARP/GARPII complex ISO
IBA
ISS
(PMID:25799061)
PMID:21873635
GO_REF:0000024
(MGI:MGI:5693572|PMID:25799061)
RGD
UniProt
PMID:25799061, PMID:21873635 GO_REF:0000024, MGI:MGI:5693572, RGD:13792537 NCBI chr 4:28,441,255...28,551,784
Ensembl chr 4:28,441,301...28,551,784
JBrowse link
G Vps51 VPS51 subunit of GARP complex ISO
IBA
(PMID:25799061)
PMID:21873635
RGD PMID:25799061, PMID:21873635 RGD:13792537 Ensembl chr 1:221,430,648...221,440,467 JBrowse link
G Vps52 VPS52 subunit of GARP complex ISO
IBA
ISS
(PMID:25799061)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25799061, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:5,431,997...5,441,736
Ensembl chr20:5,432,004...5,441,706
JBrowse link
G Vps53 VPS53 subunit of GARP complex ISO (PMID:25799061) RGD PMID:25799061 NCBI chr10:64,218,596...64,341,064
Ensembl chr10:64,222,276...64,341,109
JBrowse link
endosome to lysosome transport via multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028902.1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr17:90,370,882...90,522,091 JBrowse link
G Lyst lysosomal trafficking regulator ISO (PMID:9606205) RGD PMID:9606205 NCBI chr17:90,323,055...90,522,091 JBrowse link
G Mvb12a multivesicular body subunit 12A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:19,973,611...19,978,479
Ensembl chr16:19,973,636...19,978,478
JBrowse link
G Ubxn6 UBX domain protein 6 ISO (PMID:21822278) RGD PMID:21822278 NCBI chr 9:10,995,516...11,000,643
Ensembl chr 9:10,995,198...11,000,642
JBrowse link
G Vcp valosin-containing protein ISO
ISS
(PMID:21822278)
GO_REF:0000024
RGD
UniProt
PMID:21822278 GO_REF:0000024 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO (PMID:15024011) RGD PMID:15024011 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
endosome to plasma membrane protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snx27 sorting nexin 27 IMP RGD PMID:25136126 RGD:13508597 NCBI chr 2:195,738,613...195,821,608
Ensembl chr 2:195,738,619...195,821,608
JBrowse link
G Trarg1 trafficking regulator of GLUT4 (SLC2A4) 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:5788816|PMID:26629404), (MGI:MGI:6162416|PMID:26240143)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26240143, PMID:26629404 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5788816, MGI:MGI:6162416 NCBI chr10:63,471,330...63,491,713
Ensembl chr10:63,471,331...63,491,713
JBrowse link
G Washc1 WASH complex subunit 1 ISO
IEA
(MGI:MGI:5806548|PMID:26965651)
GO_REF:0000107
RGD
Ensembl
PMID:26965651 GO_REF:0000107, MGI:MGI:5806548 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
endosome transport via multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:56,001,724...56,010,004
Ensembl chr19:56,001,724...56,010,004
JBrowse link
G Chmp2a charged multivesicular body protein 2A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp2b charged multivesicular body protein 2B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chmp3 charged multivesicular body protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Dennd10 DENN domain containing 10 ISO (PMID:30771381) RGD PMID:30771381 NCBI chr 1:282,188,080...282,211,588
Ensembl chr 1:282,188,110...282,210,580
JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta ISO
ISS
(PMID:25588945)
GO_REF:0000024
RGD
UniProt
PMID:25588945 GO_REF:0000024 NCBI chr 7:72,924,911...72,968,099
Ensembl chr 7:72,924,799...72,968,101
JBrowse link
G RGD1566265 similar to RIKEN cDNA 2610002M06 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,870,964...78,911,601
Ensembl chr  X:78,870,964...78,911,601
JBrowse link
G Rilp Rab interacting lysosomal protein ISO (PMID:17010938) RGD PMID:17010938 NCBI chr10:63,658,451...63,662,428
Ensembl chr10:63,659,085...63,662,050
JBrowse link
G Sort1 sortilin 1 ISO (PMID:11331584) RGD PMID:11331584 NCBI chr 2:211,078,092...211,156,312
Ensembl chr 2:211,078,334...211,156,312
JBrowse link
G Vps36 vacuolar protein sorting 36 homolog IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:74,719,642...74,743,921
Ensembl chr16:74,719,553...74,743,927
JBrowse link
G Vps37a VPS37A subunit of ESCRT-I IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:54,860,811...54,899,410
Ensembl chr16:54,860,868...54,899,347
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368
JBrowse link
G Vps37c VPS37C subunit of ESCRT-I IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:226,742,267...226,774,109
Ensembl chr 1:226,742,343...226,767,868
JBrowse link
G Vps37d VPS37D subunit of ESCRT-I IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:24,651,342...24,656,793
Ensembl chr12:24,651,314...24,656,793
JBrowse link
late endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcc2 GRIP and coiled-coil domain containing 2 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:16885419)
Ensembl
UniProt
RGD
PMID:16885419, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr20:27,832,960...27,879,764
Ensembl chr20:27,832,932...27,879,759
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,044,544...167,091,453
Ensembl chr 1:167,051,209...167,091,453
JBrowse link
G Rab7b Rab7b, member RAS oncogene family ISO (PMID:20375062) RGD PMID:20375062 NCBI chr13:48,456,143...48,483,714
Ensembl chr13:48,455,923...48,482,138
JBrowse link
G Sgsm2 small G protein signaling modulator 2 ISO (PMID:21808068) RGD PMID:21808068 NCBI chr10:61,703,837...61,745,110
Ensembl chr10:61,703,839...61,745,097
JBrowse link
G Snx12 sorting nexin 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:70,989,822...71,127,330
Ensembl chr  X:70,989,822...71,127,278
JBrowse link
G Snx3 sorting nexin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390
JBrowse link
late endosome to vacuole transport via multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp4bl1 chromatin modifying protein 4B-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:67,059,939...67,060,988
Ensembl chr 4:67,059,939...67,060,974
JBrowse link
G Chmp4c charged multivesicular body protein 4C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497
JBrowse link
G Chmp5 charged multivesicular body protein 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,267,312...57,284,455
Ensembl chr 5:57,267,312...57,284,448
JBrowse link
G Chmp6 charged multivesicular body protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:109,073,678...109,079,348
Ensembl chr10:109,073,678...109,079,348
JBrowse link
G Chmp7 charged multivesicular body protein 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,385,373...51,400,606
Ensembl chr15:51,385,386...51,400,606
JBrowse link
G Leprot leptin receptor overlapping transcript IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:120,498,910...120,511,011
Ensembl chr 5:120,498,883...120,511,017
JBrowse link
G Leprotl1 leptin receptor overlapping transcript-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:61,758,941...61,769,655
Ensembl chr16:61,758,917...61,771,569
JBrowse link
G Tmem50a transmembrane protein 50A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,233,965...153,252,006
Ensembl chr 5:153,233,962...153,252,021
JBrowse link
G Tmem50b transmembrane protein 50B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:31,719,441...31,752,276
Ensembl chr11:31,719,443...31,752,243
JBrowse link
G Vta1 vesicle trafficking 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:8,830,405...8,878,191
Ensembl chr 1:8,830,411...8,878,244
JBrowse link
multivesicular body-lysosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
negative regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap1 Rho GTPase activating protein 1 ISO (PMID:16380373) RGD PMID:16380373 NCBI chr 3:80,555,196...80,576,881
Ensembl chr 3:80,555,196...80,576,856
JBrowse link
negative regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfip1 ADP-ribosylation factor interacting protein 1 IEA
ISO
GO_REF:0000107
(PMID:25789876)
Ensembl
RGD
PMID:25789876 GO_REF:0000107 NCBI chr 2:183,503,250...183,582,798
Ensembl chr 2:183,504,330...183,582,553
JBrowse link
neurotransmitter receptor transport, endosome to plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo5b myosin Vb IDA
IMP
PMID:18984164 SynGO PMID:18984164, PMID:18984164 RGD:11533643, RGD:11533643 NCBI chr18:70,426,865...70,729,985
Ensembl chr18:70,427,007...70,729,030
JBrowse link
G Vps35 VPS35 retromer complex component ISO (MGI:MGI:5796045|PMID:27460146)
(PMID:27460146)
RGD PMID:27460146 MGI:MGI:5796045 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:MGI:5498598|PMID:23739967)
Ensembl
RGD
PMID:23739967, PMID:21873635 GO_REF:0000107, MGI:MGI:5498598, RGD:13792537 NCBI chr10:51,501,547...51,669,546
Ensembl chr10:51,502,894...51,669,297
JBrowse link
G Grip1 glutamate receptor interacting protein 1 IEA
ISO
IBA
GO_REF:0000107
(MGI:MGI:4840152|PMID:20956289)
PMID:21873635
Ensembl
RGD
PMID:20956289, PMID:21873635 GO_REF:0000107, MGI:MGI:4840152, RGD:13792537 NCBI chr 7:64,672,723...64,854,939
Ensembl chr 7:64,672,722...64,864,404
JBrowse link
G Grip2 glutamate receptor interacting protein 2 IBA
ISO
PMID:21873635
(MGI:MGI:4840152|PMID:20956289)
RGD PMID:20956289, PMID:21873635 MGI:MGI:4840152, RGD:13792537 NCBI chr 4:123,585,184...123,636,040
Ensembl chr 4:123,586,231...123,636,040
JBrowse link
G Gripap1 GRIP1 associated protein 1 IMP
IBA
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723, PMID:21873635 RGD:12050105, RGD:13792537 NCBI chr  X:15,523,929...15,553,702
Ensembl chr  X:15,523,929...15,553,720
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 ISO (MGI:MGI:5819354|PMID:16037816) RGD PMID:16037816 MGI:MGI:5819354 NCBI chr14:77,380,264...77,402,007
Ensembl chr14:77,380,262...77,401,996
JBrowse link
G Rab11a RAB11a, member RAS oncogene family IMP
IBA
PMID:18045925
PMID:21873635
SynGO
GO_Central
PMID:18045925, PMID:21873635 RGD:2306457, RGD:13792537 NCBI chr 8:70,192,975...70,215,719
Ensembl chr 8:70,192,975...70,215,719
JBrowse link
G Scrib scribble planar cell polarity protein IMP
IBA
PMID:25310985
PMID:21873635
SynGO
GO_Central
PMID:25310985, PMID:21873635 RGD:12050130, RGD:13792537 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Vps35 VPS35 retromer complex component ISO (MGI:MGI:6114586|PMID:28384478) RGD PMID:28384478 MGI:MGI:6114586 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
positive regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn2 actinin alpha 2 ISO (PMID:19815520)
(MGI:MGI:4366185|PMID:19815520)
RGD PMID:19815520 MGI:MGI:4366185 NCBI chr17:66,304,530...66,397,647
Ensembl chr17:66,304,501...66,397,653
JBrowse link
G Ehd1 EH-domain containing 1 ISO
ISS
(MGI:MGI:5487527|PMID:21177873)
GO_REF:0000024
RGD
UniProt
PMID:21177873 GO_REF:0000024, MGI:MGI:5487527 NCBI chr 1:221,644,867...221,667,242
Ensembl chr 1:221,644,867...221,667,239
JBrowse link
G Ehd2 EH-domain containing 2 ISO
ISS
(MGI:MGI:5487527|PMID:21177873)
GO_REF:0000024
RGD
UniProt
PMID:21177873 GO_REF:0000024, MGI:MGI:5487527 NCBI chr 1:77,847,599...77,865,870
Ensembl chr 1:77,847,600...77,865,870
JBrowse link
G Eipr1 EARP complex and GARP complex interacting protein 1 ISS
ISO
GO_REF:0000024
(PMID:27440922)
UniProt
RGD
PMID:27440922 GO_REF:0000024 NCBI chr 6:48,021,771...48,135,241
Ensembl chr 6:48,021,771...48,135,241
JBrowse link
G Pla2g4e phospholipase A2, group IVE ISO (PMID:24413173)
(MGI:MGI:6414707|PMID:24413173)
RGD PMID:24413173 MGI:MGI:6414707 NCBI chr 3:111,952,396...112,018,470
Ensembl chr 3:111,952,348...111,994,337
JBrowse link
G Sorl1 sortilin related receptor 1 ISO (PMID:22621900) RGD PMID:22621900 NCBI chr 8:46,228,077...46,287,171 JBrowse link
positive regulation of endosome to plasma membrane protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 ISO (PMID:25589740) RGD PMID:25589740 NCBI chr 6:99,356,509...99,361,909
Ensembl chr 6:99,356,509...99,361,909
JBrowse link
G Commd1 copper metabolism domain containing 1 ISO MGI:MGI:2176228|MGI:MGI:5315712 (MGI:MGI:5806548|PMID:26965651) RGD PMID:26965651 MGI:MGI:5806548 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 IMP PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chr16:54,932,546...55,002,322
Ensembl chr16:54,934,056...55,002,322
JBrowse link
positive regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eipr1 EARP complex and GARP complex interacting protein 1 ISS
ISO
GO_REF:0000024
(PMID:27440922)
UniProt
RGD
PMID:27440922 GO_REF:0000024 NCBI chr 6:48,021,771...48,135,241
Ensembl chr 6:48,021,771...48,135,241
JBrowse link
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snf8 SNF8 subunit of ESCRT-II IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
G Stam signal transducing adaptor molecule IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:81,209,795...81,256,111
Ensembl chr17:81,209,867...81,255,808
JBrowse link
G Vps25 vacuolar protein sorting 25 homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:89,174,684...89,180,165
Ensembl chr10:89,174,684...89,180,160
JBrowse link
G Vps28 VPS28 subunit of ESCRT-I IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 7:117,684,339...117,688,187
Ensembl chr 7:117,684,339...117,688,187
JBrowse link
G Vps36 vacuolar protein sorting 36 homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:74,719,642...74,743,921
Ensembl chr16:74,719,553...74,743,927
JBrowse link
recycling endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcc2 GRIP and coiled-coil domain containing 2 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:17488291)
Ensembl
UniProt
RGD
PMID:17488291, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr20:27,832,960...27,879,764
Ensembl chr20:27,832,932...27,879,759
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,044,544...167,091,453
Ensembl chr 1:167,051,209...167,091,453
JBrowse link
G Tbc1d14 TBC1 domain family, member 14 IEA
ISO
GO_REF:0000107
(PMID:17562788)
Ensembl
RGD
PMID:17562788 GO_REF:0000107 NCBI chr14:79,172,272...79,438,765
Ensembl chr14:79,205,466...79,438,764
JBrowse link
regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bves blood vessel epicardial substance ISO (MGI:MGI:5613454|PMID:24048452) RGD PMID:24048452 MGI:MGI:5613454 NCBI chr20:50,439,885...50,474,678
Ensembl chr20:50,439,883...50,474,678
JBrowse link
G Inpp5f inositol polyphosphate-5-phosphatase F ISO
IBA
(MGI:MGI:5751634|PMID:25869669)
PMID:21873635
(PMID:25869669)
RGD PMID:25869669, PMID:21873635 MGI:MGI:5751634, RGD:13792537 NCBI chr 1:200,037,749...200,116,524
Ensembl chr 1:200,037,749...200,116,524
JBrowse link
G Ndrg4 NDRG family member 4 ISO
IEA
(MGI:MGI:5613454|PMID:24048452)
GO_REF:0000107
RGD
Ensembl
PMID:24048452 GO_REF:0000107, MGI:MGI:5613454 NCBI chr19:9,766,439...9,802,396
Ensembl chr19:9,766,439...9,801,942
JBrowse link
G Pla2g3 phospholipase A2, group III ISO
IEA
(PMID:20393563)
GO_REF:0000107
RGD
Ensembl
PMID:20393563 GO_REF:0000107 NCBI chr14:83,724,828...83,730,614
Ensembl chr14:83,724,933...83,730,614
JBrowse link
G Rab11b RAB11B, member RAS oncogene family ISO
ISS
(MGI:MGI:5486575|PMID:10942597)
GO_REF:0000024
RGD
UniProt
PMID:10942597 GO_REF:0000024, MGI:MGI:5486575 NCBI chr 7:18,598,991...18,612,132
Ensembl chr 7:18,598,880...18,612,147
JBrowse link
regulation of multivesicular body size involved in endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snf8 SNF8 subunit of ESCRT-II ISO (PMID:17714434) RGD PMID:17714434 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 IEA
ISO
GO_REF:0000107
(MGI:MGI:5498598|PMID:23739967)
Ensembl
RGD
PMID:23739967 GO_REF:0000107, MGI:MGI:5498598 NCBI chr10:51,501,547...51,669,546
Ensembl chr10:51,502,894...51,669,297
JBrowse link
G Gripap1 GRIP1 associated protein 1 IDA
IBA
IMP
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723, PMID:21873635, PMID:20098723 RGD:12050105, RGD:13792537, RGD:12050105 NCBI chr  X:15,523,929...15,553,702
Ensembl chr  X:15,523,929...15,553,720
JBrowse link
G Tamalin trafficking regulator and scaffold protein tamalin ISO (MGI:MGI:6114599|PMID:28285821) RGD PMID:28285821 MGI:MGI:6114599 NCBI chr 7:142,869,785...142,877,551
Ensembl chr 7:142,869,752...142,878,347
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 IDA
IBA
IMP
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723, PMID:21873635, PMID:20098723 RGD:12050105, RGD:13792537, RGD:12050105 NCBI chr  X:15,523,929...15,553,702
Ensembl chr  X:15,523,929...15,553,720
JBrowse link
regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 ISO
IBA
UniProtKB:Q7KVL7 (PMID:23395371)
PMID:21873635
RGD PMID:23395371, PMID:21873635 RGD:13792537 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Rab29 RAB29, member RAS oncogene family IMP PMID:23395371 ParkinsonsUK-UCL PMID:23395371 RGD:8553873 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220
JBrowse link
retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfy1 ankyrin repeat and FYVE domain containing 1 ISO (PMID:22284051) RGD PMID:22284051 NCBI chr10:59,259,955...59,331,669
Ensembl chr10:59,259,955...59,331,669
JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 ISO (MGI:MGI:5608551|PMID:24928897) RGD PMID:24928897 MGI:MGI:5608551 NCBI chr12:22,665,128...22,676,079
Ensembl chr12:22,665,112...22,676,075
JBrowse link
G Arfrp1 ADP-ribosylation factor related protein 1 ISO (PMID:16129887) RGD PMID:16129887 NCBI chr 3:176,857,667...176,865,105
Ensembl chr 3:176,859,151...176,865,103
JBrowse link
G Arl1 ADP-ribosylation factor like GTPase 1 ISO
ISS
(PMID:19224922)
GO_REF:0000024
RGD
UniProt
PMID:19224922 GO_REF:0000024 NCBI chr 7:29,282,411...29,293,455
Ensembl chr 7:29,282,305...29,293,399
JBrowse link
G Baiap3 BAI1-associated protein 3 ISO (PMID:28626000) RGD PMID:28626000 NCBI chr10:14,601,133...14,613,881
Ensembl chr10:14,599,197...14,613,878
JBrowse link
G Bet1l Bet1 golgi vesicular membrane trafficking protein-like ISO
IBA
IEA
(PMID:15215310)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15215310, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:213,602,836...213,606,507
Ensembl chr 1:213,602,850...213,605,643
JBrowse link
G Cln5 CLN5, intracellular trafficking protein ISO (PMID:22431521) RGD PMID:22431521 NCBI chr15:93,634,815...93,644,146 JBrowse link
G Cltc clathrin heavy chain ISO (PMID:20065094) RGD PMID:20065094 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Dctn1 dynactin subunit 1 ISO
IEA
(PMID:19619496)
GO_REF:0000107
RGD
Ensembl
PMID:19619496 GO_REF:0000107 NCBI chr 4:114,876,770...114,896,567
Ensembl chr 4:114,876,770...114,896,573
JBrowse link
G Dennd2a DENN domain containing 2A ISO
IBA
(PMID:20937701)
PMID:21873635
RGD PMID:20937701, PMID:21873635 RGD:13792537 NCBI chr 4:67,242,257...67,342,993
Ensembl chr 4:67,242,271...67,301,102
JBrowse link
G Dennd5a DENN domain containing 5A ISO (PMID:19619496) RGD PMID:19619496 NCBI chr 1:174,524,047...174,588,553
Ensembl chr 1:174,524,047...174,588,529
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 ISO
ISS
(MGI:MGI:2182501|PMID:11929610)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:11929610 GO_REF:0000024, MGI:MGI:2182501 NCBI chr 4:152,087,393...152,380,023
Ensembl chr 4:152,087,379...152,380,184
JBrowse link
G Evi5 ecotropic viral integration site 5 ISO (PMID:17562788) RGD PMID:17562788 NCBI chr14:2,892,738...3,038,237
Ensembl chr14:2,892,753...3,038,237
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ISO (PMID:12808027) RGD PMID:12808027 NCBI chr 1:265,904,616...266,033,107
Ensembl chr 1:265,904,566...266,033,156
JBrowse link
G Gcc2 GRIP and coiled-coil domain containing 2 ISO (PMID:17488291) RGD PMID:17488291 NCBI chr20:27,832,960...27,879,764
Ensembl chr20:27,832,932...27,879,759
JBrowse link
G Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 ISO (PMID:15886016) RGD PMID:15886016 NCBI chr 7:120,102,596...120,119,738
Ensembl chr 7:120,106,901...120,119,737
JBrowse link
G Gosr1 golgi SNAP receptor complex member 1 ISO (PMID:15215310) RGD PMID:15215310 NCBI chr10:63,405,526...63,442,257
Ensembl chr10:63,405,586...63,442,250
JBrowse link
G Gosr2 golgi SNAP receptor complex member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,735,772...91,756,123
Ensembl chr10:91,736,780...91,756,081
JBrowse link
G Heatr5a HEAT repeat containing 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:72,648,654...72,750,202
Ensembl chr 6:72,648,662...72,750,170
JBrowse link
G Heatr5b HEAT repeat containing 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:1,330,314...1,410,339
Ensembl chr 6:1,330,314...1,410,339
JBrowse link
G LOC100911994 coiled-coil domain-containing protein 132-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:31,332,759...31,352,476
Ensembl chr 4:31,333,970...31,351,942
JBrowse link
G Magel2 MAGE family member L2 ISO (PMID:23452853) RGD PMID:23452853 NCBI chr 1:123,015,404...123,019,945
Ensembl chr 1:123,015,746...123,019,522
JBrowse link
G Pheta1 PH domain containing endocytic trafficking adaptor 1 ISO
IBA
(PMID:21233288)
PMID:21873635
RGD PMID:21233288, PMID:21873635 RGD:13792537 NCBI chr12:40,225,316...40,230,573
Ensembl chr12:40,226,593...40,227,297
JBrowse link
G Pheta2 PH domain containing endocytic trafficking adaptor 2 ISO
IBA
(PMID:21233288)
PMID:21873635
RGD PMID:21233288, PMID:21873635 RGD:13792537 NCBI chr 7:123,572,153...123,578,590
Ensembl chr 7:123,573,930...123,578,551
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing ISO (PMID:14551253), (PMID:16954148) RGD PMID:14551253, PMID:16954148 NCBI chr 9:71,911,744...72,005,816
Ensembl chr 9:71,915,421...72,005,838
JBrowse link
G Plekhj1 pleckstrin homology domain containing J1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,784,314...11,786,476
Ensembl chr 7:11,784,341...11,786,475
JBrowse link
G Prepl prolyl endopeptidase-like ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:6316362|PMID:23321636)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23321636 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6316362 NCBI chr 6:8,316,861...8,346,293
Ensembl chr 6:8,318,979...8,346,197
JBrowse link
G Rab29 RAB29, member RAS oncogene family ISO
ISS
(PMID:24788816)
GO_REF:0000024
RGD
UniProt
PMID:24788816 GO_REF:0000024 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220
JBrowse link
G Rab6a RAB6A, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:165,624,973...165,664,201
Ensembl chr 1:165,625,058...165,664,192
JBrowse link
G Rab6b RAB6B, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:111,600,375...111,668,817
Ensembl chr 8:111,600,532...111,668,808
JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO (PMID:19531583) RGD PMID:19531583 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Rab9a RAB9A, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:29,525,256...29,547,295
Ensembl chr  X:29,525,256...29,547,294
JBrowse link
G Rab9b RAB9B, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:107,531,404...107,542,510
Ensembl chr  X:107,531,404...107,542,510
JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 ISO
IBA
(PMID:23091056)
PMID:21873635
RGD PMID:23091056, PMID:21873635 RGD:13792537 NCBI chr 5:59,080,290...59,088,777
Ensembl chr 5:59,080,765...59,088,523
JBrowse link
G Rhobtb3 Rho-related BTB domain containing 3 ISO (PMID:19490898) RGD PMID:19490898 NCBI chr 2:2,627,655...2,683,305
Ensembl chr 2:2,627,393...2,683,116
JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 ISO
IBA
(PMID:23091056)
PMID:21873635
RGD PMID:23091056, PMID:21873635 RGD:13792537 NCBI chr 1:247,688,778...247,784,219
Ensembl chr 1:247,688,789...247,781,875
JBrowse link
G Rnf126 ring finger protein 126 ISO (PMID:24275455) RGD PMID:24275455 NCBI chr 7:12,820,796...12,828,325
Ensembl chr 7:12,820,840...12,828,334
JBrowse link
G Slc66a2 solute carrier family 66 member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:76,768,466...76,805,773
Ensembl chr18:76,770,012...76,805,766
JBrowse link
G Snx1 sorting nexin 1 ISO
ISS
(PMID:18088323)
GO_REF:0000024
RGD
UniProt
PMID:18088323 GO_REF:0000024 NCBI chr 8:71,745,687...71,786,182
Ensembl chr 8:71,745,896...71,784,551
JBrowse link
G Snx2 sorting nexin 2 ISO (PMID:20138391) RGD PMID:20138391 NCBI chr18:48,132,386...48,173,974
Ensembl chr18:48,132,414...48,173,971
JBrowse link
G Snx32 sorting nexin 32 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,873,782...220,890,804
Ensembl chr 1:220,874,717...220,878,059
JBrowse link
G Snx5 sorting nexin 5 ISO
IBA
(PMID:17148574)
PMID:21873635
RGD PMID:17148574, PMID:21873635 RGD:13792537 NCBI chr 3:138,378,032...138,397,944
Ensembl chr 3:138,378,202...138,397,870
JBrowse link
G Snx6 sorting nexin 6 ISO
IBA
(PMID:19935774)
PMID:21873635
RGD PMID:19935774, PMID:21873635 RGD:13792537 NCBI chr 6:75,626,927...75,670,172
Ensembl chr 6:75,626,927...75,670,135
JBrowse link
G Spag9 sperm associated antigen 9 ISO (PMID:19056739) RGD PMID:19056739 NCBI chr10:81,693,736...81,827,562
Ensembl chr10:81,693,770...81,827,562
JBrowse link
G Stx16 syntaxin 16 ISO (PMID:15215310), (PMID:17389686), (PMID:18195106) RGD PMID:15215310, PMID:17389686, PMID:18195106 NCBI chr 3:172,154,739...172,183,699
Ensembl chr 3:172,154,754...172,183,732
JBrowse link
G Stx5 syntaxin 5 ISO (PMID:15215310) RGD PMID:15215310 NCBI chr 1:224,939,497...224,955,658
Ensembl chr 1:224,939,497...224,955,657
JBrowse link
G Stx6 syntaxin 6 ISO
IBA
(PMID:19224922)
PMID:21873635
RGD PMID:19224922, PMID:21873635 RGD:13792537 NCBI chr13:72,804,218...72,850,757
Ensembl chr13:72,804,218...72,852,967
JBrowse link
G Tbc1d10a TBC1 domain family, member 10a ISO (PMID:17562788) RGD PMID:17562788 NCBI chr14:84,417,320...84,445,034
Ensembl chr14:84,417,320...84,445,034
JBrowse link
G Tbc1d10b TBC1 domain family, member 10b ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:198,641,018...198,652,674
Ensembl chr 1:198,641,018...198,652,674
JBrowse link
G Tbc1d10c TBC1 domain family, member 10C ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:219,431,094...219,439,102
Ensembl chr 1:219,431,997...219,438,779
JBrowse link
G Tbc1d17 TBC1 domain family, member 17 ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:100,836,993...100,845,216
Ensembl chr 1:100,836,990...100,845,392
JBrowse link
G Tbc1d23 TBC1 domain family, member 23 ISO (PMID:29084197) RGD PMID:29084197 NCBI chr11:45,401,396...45,459,841
Ensembl chr11:45,401,403...45,459,821
JBrowse link
G Tbc1d5 TBC1 domain family, member 5 ISO (PMID:22354992) RGD PMID:22354992 NCBI chr 9:1,144,641...1,747,732
Ensembl chr 9:1,145,700...1,746,397
JBrowse link
G Tmem87a transmembrane protein 87A ISO
IBA
UniProtKB:Q9P1Q0 (PMID:26157166)
PMID:21873635
RGD PMID:26157166, PMID:21873635 RGD:13792537 NCBI chr 3:112,128,138...112,174,097
Ensembl chr 3:112,132,351...112,174,269
JBrowse link
G Tmem87b transmembrane protein 87B ISO
IBA
UniProtKB:Q9P1Q0 (PMID:26157166)
PMID:21873635
RGD PMID:26157166, PMID:21873635 RGD:13792537 NCBI chr 3:121,357,787...121,393,443
Ensembl chr 3:121,358,003...121,393,443
JBrowse link
G Trim27 tripartite motif-containing 27 ISO (PMID:23452853) RGD PMID:23452853 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212
JBrowse link
G Ube2o ubiquitin-conjugating enzyme E2O ISO (PMID:23452853) RGD PMID:23452853 NCBI chr10:105,505,721...105,553,167
Ensembl chr10:105,506,955...105,552,986
JBrowse link
G Vamp3 vesicle-associated membrane protein 3 ISO
ISS
(PMID:18195106)
GO_REF:0000024
RGD
UniProt
PMID:18195106 GO_REF:0000024 NCBI chr 5:168,126,157...168,136,628
Ensembl chr 5:168,126,157...168,136,666
JBrowse link
G Vps26a VPS26 retromer complex component A ISO
IBA
ISS
(MGI:MGI:3040541|PMID:15078902)
PMID:21873635
GO_REF:0000024
(PMID:15078903)
RGD
UniProt
PMID:15078902, PMID:15078903, PMID:21873635 GO_REF:0000024, MGI:MGI:3040541, RGD:13792537 NCBI chr20:32,085,465...32,115,310
Ensembl chr20:32,086,746...32,115,357
JBrowse link
G Vps26b VPS26 retromer complex component B ISO
IBA
(MGI:MGI:5607223|PMID:21920005)
PMID:21873635
RGD PMID:21920005, PMID:21873635 MGI:MGI:5607223, RGD:13792537 NCBI chr 8:28,054,407...28,075,514
Ensembl chr 8:28,054,407...28,075,514
JBrowse link
G Vps29 VPS29 retromer complex component IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr12:39,690,069...39,699,114
Ensembl chr12:39,690,069...39,699,113
JBrowse link
G Vps35 VPS35 retromer complex component IMP
IBA
ISO
PMID:23395371
PMID:21873635
(PMID:15078903), (PMID:26618722), (PMID:27385586)
RGD PMID:15078903, PMID:26618722, PMID:27385586, PMID:23395371, PMID:21873635 RGD:8553873, RGD:13792537 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
G Vps50 VPS50 subunit of EARP/GARPII complex NOT ISO
ISS
(PMID:25799061)
GO_REF:0000024
RGD
UniProt
PMID:25799061 GO_REF:0000024 NCBI chr 4:28,441,255...28,551,784
Ensembl chr 4:28,441,301...28,551,784
JBrowse link
G Vps51 VPS51 subunit of GARP complex ISO
IBA
(PMID:20685960), (PMID:25799061)
PMID:21873635
RGD PMID:20685960, PMID:25799061, PMID:21873635 RGD:13792537 Ensembl chr 1:221,430,648...221,440,467 JBrowse link
G Vps52 VPS52 subunit of GARP complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,431,997...5,441,736
Ensembl chr20:5,432,004...5,441,706
JBrowse link
G Vps53 VPS53 subunit of GARP complex ISO
IBA
(PMID:25799061)
PMID:21873635
RGD PMID:25799061, PMID:21873635 RGD:13792537 NCBI chr10:64,218,596...64,341,064
Ensembl chr10:64,222,276...64,341,109
JBrowse link
G Vps54 VPS54 subunit of GARP complex ISO
IBA
IEA
(PMID:25799061)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:25799061, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:106,153,407...106,207,715
Ensembl chr14:106,153,575...106,207,658
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:15215310), (PMID:18195106), (PMID:19224922)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15215310, PMID:18195106, PMID:19224922, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 1:276,310,072...276,508,635
Ensembl chr 1:276,309,927...276,490,602
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:102,340,261...102,353,612
Ensembl chr 6:102,339,857...102,353,403
JBrowse link
G Washc1 WASH complex subunit 1 ISS
ISO
GO_REF:0000024
(PMID:19922874), (PMID:23452853)
UniProt
RGD
PMID:19922874, PMID:23452853 GO_REF:0000024 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
G Washc2c WASH complex subunit 2C ISO
ISS
(PMID:19922874)
GO_REF:0000024
RGD
UniProt
PMID:19922874 GO_REF:0000024 NCBI chr 4:148,139,512...148,197,363
Ensembl chr 4:148,139,528...148,197,365
JBrowse link
G Ykt6 YKT6 v-SNARE homolog ISO (PMID:15215310) RGD PMID:15215310 NCBI chr14:86,196,018...86,207,057
Ensembl chr14:86,195,892...86,205,712
JBrowse link
retrograde transport, endosome to plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd27 ankyrin repeat domain 27 ISO
IBA
(PMID:24856514)
PMID:21873635
RGD PMID:24856514, PMID:21873635 RGD:13792537 NCBI chr 1:91,857,048...91,958,763
Ensembl chr 1:91,857,057...91,958,763
JBrowse link
G Ankrd50 ankyrin repeat domain 50 ISO (PMID:25278552) RGD PMID:25278552 NCBI chr 2:125,289,071...125,323,527
Ensembl chr 2:125,288,693...125,323,454
JBrowse link
G Ccdc22 coiled-coil domain containing 22 ISS
ISO
GO_REF:0000024
(PMID:28892079)
UniProt
RGD
PMID:28892079 GO_REF:0000024 NCBI chr  X:15,742,978...15,754,925
Ensembl chr  X:15,742,978...15,754,925
JBrowse link
G Ccdc93 coiled-coil domain containing 93 ISS
ISO
GO_REF:0000024
(PMID:28892079)
UniProt
RGD
PMID:28892079 GO_REF:0000024 NCBI chr13:37,400,455...37,473,973
Ensembl chr13:37,400,476...37,468,840
JBrowse link
G Entr1 endosome associated trafficking regulator 1 ISO
IBA
(PMID:25278552)
PMID:21873635
RGD PMID:25278552, PMID:21873635 RGD:13792537 NCBI chr 3:3,827,498...3,834,219
Ensembl chr 3:3,827,498...3,834,210
JBrowse link
G Micall1 MICAL-like 1 ISO
ISS
(PMID:19864458)
GO_REF:0000024
RGD
UniProt
PMID:19864458 GO_REF:0000024 NCBI chr 7:120,343,900...120,375,151
Ensembl chr 7:120,345,180...120,375,156
JBrowse link
G Rab11b RAB11B, member RAS oncogene family ISO
ISS
(PMID:19244346)
GO_REF:0000024
RGD
UniProt
PMID:19244346 GO_REF:0000024 NCBI chr 7:18,598,991...18,612,132
Ensembl chr 7:18,598,880...18,612,147
JBrowse link
G Snx17 sorting nexin 17 ISS
IBA
IEA
ISO
GO_REF:0000024
PMID:21873635
GO_REF:0000107
(PMID:28892079)
UniProt
Ensembl
RGD
PMID:28892079, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 6:26,541,137...26,546,650
Ensembl chr 6:26,541,138...26,546,545
JBrowse link
G Snx27 sorting nexin 27 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:20733053), (PMID:21602791), (PMID:23563491)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20733053, PMID:21602791, PMID:23563491, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 2:195,738,613...195,821,608
Ensembl chr 2:195,738,619...195,821,608
JBrowse link
G Snx31 sorting nexin 31 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:75,308,847...75,364,264
Ensembl chr 7:75,309,255...75,364,166
JBrowse link
G Vps26a VPS26 retromer complex component A ISO
ISS
(PMID:21602791)
GO_REF:0000024
RGD
UniProt
PMID:21602791 GO_REF:0000024 NCBI chr20:32,085,465...32,115,310
Ensembl chr20:32,086,746...32,115,357
JBrowse link
G Vps26c VPS26 endosomal protein sorting factor C ISO (PMID:28892079) RGD PMID:28892079 NCBI chr11:34,764,053...34,792,446
Ensembl chr11:34,764,721...34,791,993
JBrowse link
G Vps29 VPS29 retromer complex component ISS
ISO
GO_REF:0000024
(PMID:24856514), (PMID:28892079)
UniProt
RGD
PMID:24856514, PMID:28892079 GO_REF:0000024 NCBI chr12:39,690,069...39,699,114
Ensembl chr12:39,690,069...39,699,113
JBrowse link
G Vps35 VPS35 retromer complex component ISO (PMID:20164305), (PMID:21602791) RGD PMID:20164305, PMID:21602791 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
G Vps35l VPS35 endosomal protein sorting factor like ISO
IBA
ISS
(PMID:28892079)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:28892079, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:188,448,517...188,552,268
Ensembl chr 1:188,448,478...188,552,272
JBrowse link
G Vps39 VPS39 subunit of HOPS complex ISO (PMID:25266290) RGD PMID:25266290 NCBI chr 3:112,087,213...112,125,307
Ensembl chr 3:112,087,677...112,125,318
JBrowse link
G Washc1 WASH complex subunit 1 ISO (PMID:22114305)
(MGI:MGI:5613462|PMID:23275443)
RGD PMID:22114305, PMID:23275443 MGI:MGI:5613462 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
G Washc2c WASH complex subunit 2C ISO (PMID:25278552) RGD PMID:25278552 NCBI chr 4:148,139,512...148,197,363
Ensembl chr 4:148,139,528...148,197,365
JBrowse link
slow endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Micall1 MICAL-like 1 ISO
ISS
(PMID:19864458)
GO_REF:0000024
RGD
UniProt
PMID:19864458 GO_REF:0000024 NCBI chr 7:120,343,900...120,375,151
Ensembl chr 7:120,345,180...120,375,156
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:MGI:5617942|PMID:20203623) RGD PMID:20203623 MGI:MGI:5617942 NCBI chr  X:32,329,883...32,376,301
Ensembl chr  X:32,329,598...32,355,307
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 ISO (MGI:MGI:6189637|PMID:11588176) RGD PMID:11588176 MGI:MGI:6189637 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 IDA
IBA
ISO
PMID:22539861
PMID:21873635
(MGI:MGI:6189637|PMID:11588176)
RGD PMID:11588176, PMID:22539861, PMID:21873635 MGI:MGI:6189637, RGD:12050120, RGD:13792537 NCBI chr 7:11,838,639...11,873,992
Ensembl chr 7:11,838,639...11,873,984
JBrowse link
G Btbd8 BTB domain containing 8 ISO (MGI:MGI:6104538|PMID:29262337) RGD PMID:29262337 MGI:MGI:6104538 NCBI chr14:3,282,422...3,351,740
Ensembl chr14:3,284,089...3,300,200
JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Btbd8 BTB domain containing 8 ISS
ISO
GO_REF:0000024
(MGI:MGI:6104538|PMID:29262337)
UniProt
RGD
PMID:29262337 GO_REF:0000024, MGI:MGI:6104538 NCBI chr14:3,282,422...3,351,740
Ensembl chr14:3,284,089...3,300,200
JBrowse link
G Dnm1l dynamin 1-like IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:88,830,968...88,882,271
Ensembl chr11:88,830,957...88,880,198
JBrowse link
synaptic vesicle to endosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stx12 syntaxin 12 IDA
IMP
PMID:17004320 SynGO PMID:17004320, PMID:17004320 RGD:12050136, RGD:12050136 NCBI chr 5:151,044,050...151,072,893
Ensembl chr 5:151,044,329...151,072,904
JBrowse link
G Stx6 syntaxin 6 IDA
IMP
PMID:17004320 SynGO PMID:17004320, PMID:17004320 RGD:12050136, RGD:12050136 NCBI chr13:72,804,218...72,850,757
Ensembl chr13:72,804,218...72,852,967
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A IDA
IMP
PMID:17004320 SynGO PMID:17004320, PMID:17004320 RGD:12050136, RGD:12050136 NCBI chr 1:276,310,072...276,508,635
Ensembl chr 1:276,309,927...276,490,602
JBrowse link
trans-Golgi network to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab13 RAB13, member RAS oncogene family ISS
ISO
GO_REF:0000024
(PMID:18779367)
UniProt
RGD
PMID:18779367 GO_REF:0000024 NCBI chr 2:189,581,209...189,586,358
Ensembl chr 2:189,581,644...189,586,338
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      vesicle-mediated transport 1652
        endosomal transport 234
          endocytic recycling + 54
          endosome transport via multivesicular body sorting pathway + 35
          retrograde transport, endosome to Golgi + 88
          retrograde transport, endosome to plasma membrane + 31
          synaptic vesicle endosomal processing + 12
          trans-Golgi network to recycling endosome transport 1
Path 2
Term Annotations click to browse term
  biological_process 20014
    localization 6486
      establishment of localization 4918
        establishment of localization in cell 2156
          intracellular transport 1511
            endosomal transport 234
              endocytic recycling + 54
              endosome transport via multivesicular body sorting pathway + 35
              retrograde transport, endosome to Golgi + 88
              retrograde transport, endosome to plasma membrane + 31
              synaptic vesicle endosomal processing + 12
              trans-Golgi network to recycling endosome transport 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.