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ONTOLOGY REPORT - ANNOTATIONS


Term:aggresome
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Accession:GO:0016235 term browser browse the term
Definition:An inclusion body formed by dynein-dependent retrograde transport of an aggregated protein on microtubules.
Synonyms:xref: Wikipedia:Aggresome


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aggresome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl-interactor 1 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr17:89,951,662...90,033,334
Ensembl chr17:89,951,752...90,033,328
JBrowse link
G Cabin1 calcineurin binding protein 1 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr20:13,836,032...13,963,003
Ensembl chr20:13,836,030...13,963,003
JBrowse link
G Clu clusterin IDA RGD PMID:12799419 RGD:1582417 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
G Dbf4b DBF4 zinc finger B ISO RGD GO_REF:0000052 NCBI chr10:90,710,468...90,723,313 JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 4:140,886,644...140,918,654
Ensembl chr 4:140,886,545...140,915,779
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 7:11,401,501...11,406,771
Ensembl chr 7:11,401,501...11,406,771
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 ISO (PMID:16159959) RGD PMID:16159959 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 5:151,172,189...151,199,746
Ensembl chr 5:151,172,206...151,199,745
JBrowse link
G Hdac6 histone deacetylase 6 ISO (PMID:14675537) RGD PMID:14675537 NCBI chr  X:15,295,372...15,316,673
Ensembl chr  X:15,295,473...15,316,671
JBrowse link
G Hoxc9 homeobox C9 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 7:144,592,462...144,598,807
Ensembl chr 7:144,595,960...144,598,632
JBrowse link
G Hoxd3 homeo box D3 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 3:61,650,569...61,670,285
Ensembl chr 3:61,658,245...61,670,282
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO (PMID:15885686) RGD PMID:15885686 NCBI chr20:4,875,834...4,881,751
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B ISO (PMID:15885686) RGD PMID:15885686 NCBI chr20:4,877,638...4,880,112
Ensembl chr20:2,699,712...2,701,815
JBrowse link
G Hspb7 heat shock protein family B (small) member 7 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 5:159,968,077...159,971,563
Ensembl chr 5:159,967,839...159,971,562
JBrowse link
G Klf8 Kruppel-like factor 8 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr  X:18,836,902...19,032,012
Ensembl chr  X:18,835,827...18,890,090
JBrowse link
G Klhl14 kelch-like family member 14 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr18:12,526,627...12,640,381
Ensembl chr18:12,528,111...12,640,716
JBrowse link
G Pick1 protein interacting with PRKCA 1 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 7:120,465,472...120,484,824
Ensembl chr 7:120,465,130...120,484,840
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Prdm16 PR/SET domain 16 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 5:171,662,277...171,711,561
Ensembl chr 5:171,662,277...171,710,316
JBrowse link
G Prkcq protein kinase C, theta ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr17:70,971,915...71,105,286
Ensembl chr17:70,971,915...71,105,286
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO
ISS
(PMID:14645198)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:14645198 GO_REF:0000024 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Psap prosaposin IEA
ISO
GO_REF:0000107
(MGI:4819645|PMID:20498017)
Ensembl
RGD
PMID:20498017 GO_REF:0000107, MGI:4819645 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875
JBrowse link
G Psen1 presenilin 1 ISO
ISS
(PMID:21143716)
GO_REF:0000024
RGD
UniProt
PMID:21143716 GO_REF:0000024 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Rangap1 RAN GTPase activating protein 1 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 7:122,939,266...122,967,178
Ensembl chr 7:122,940,376...122,967,178
JBrowse link
G Rnf32 ring finger protein 32 ISO (PMID:11890671) RGD PMID:11890671 NCBI chr 4:2,053,283...2,113,917
Ensembl chr 4:2,053,712...2,111,610
JBrowse link
G Sfmbt2 Scm-like with four mbt domains 2 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr17:71,719,012...71,904,303
Ensembl chr17:71,723,620...71,897,972
JBrowse link
G Sqstm1 sequestosome 1 IBA
ISO
PMID:21873635
(MGI:5446594|PMID:22792322)
RGD PMID:22792322, PMID:21873635 MGI:5446594, RGD:13792537 NCBI chr10:35,704,728...35,716,316
Ensembl chr10:35,704,730...35,716,294
JBrowse link
G Stradb STE20 related adaptor beta ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 9:65,763,437...65,782,513
Ensembl chr 9:65,763,437...65,782,513
JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr17:42,229,667...42,241,025
Ensembl chr17:42,229,642...42,241,066
JBrowse link
G Trim37 tripartite motif-containing 37 ISO
IBA
(PMID:15885686)
PMID:21873635
RGD PMID:15885686, PMID:21873635 RGD:13792537 NCBI chr10:74,436,165...74,568,636
Ensembl chr10:74,436,208...74,568,493
JBrowse link
G Trim50 tripartite motif-containing 50 IEA
ISO
GO_REF:0000107
(MGI:5446594|PMID:22792322)
Ensembl
RGD
PMID:22792322 GO_REF:0000107, MGI:5446594 NCBI chr12:24,348,426...24,365,467
Ensembl chr12:24,348,321...24,365,324
JBrowse link
G Trim66 tripartite motif-containing 66 ISO RGD GO_REF:0000052 NCBI chr 1:174,062,176...174,132,732
Ensembl chr 1:174,066,911...174,119,815
JBrowse link
G Ubd ubiquitin D IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19033385)
Ensembl
UniProt
RGD
PMID:19033385 GO_REF:0000024, GO_REF:0000107 NCBI chr20:1,876,175...1,878,126
Ensembl chr20:1,876,173...1,897,814
JBrowse link
G Ubqln1 ubiquilin 1 IEA
ISO
ISS
GO_REF:0000107
(PMID:16159959), (PMID:21143716)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16159959, PMID:21143716 GO_REF:0000024, GO_REF:0000107 NCBI chr17:6,840,441...6,878,842
Ensembl chr17:6,840,463...6,878,844
JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated ISO (MGI:4421086|PMID:19819238) RGD PMID:19819238 MGI:4421086 NCBI chr17:77,252,099...77,262,301
Ensembl chr17:77,252,100...77,261,731
JBrowse link
G Urb2 URB2 ribosome biogenesis homolog ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr19:56,802,843...56,827,017
Ensembl chr19:56,803,382...56,826,960
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 3:141,224,858...141,298,272
Ensembl chr 3:141,225,290...141,298,265
JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 7:53,651,529...53,715,007
Ensembl chr 7:53,653,116...53,714,879
JBrowse link
G Zfp161 zinc finger protein 161 ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052, GO_REF:0000107 NCBI chr 9:117,739,067...117,744,273
Ensembl chr 9:117,737,611...117,744,300
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      intracellular anatomical structure 14638
        inclusion body 84
          aggresome 40
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.