Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:cytosolic transport
go back to main search page
Accession:GO:0016482 term browser browse the term
Definition:The directed movement of substances or organelles within the cytosol.


show annotations for term's descendants           Sort by:
 
cytosolic transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 ISO (MGI:5293241|PMID:21874009) RGD PMID:21874009 MGI:5293241 NCBI chr14:104,338,486...104,375,840
Ensembl chr14:104,340,434...104,375,649
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 ISO (MGI:3688015|PMID:11684676) RGD PMID:11684676 MGI:3688015 NCBI chr 5:154,205,358...154,219,550
Ensembl chr 5:154,205,402...154,213,801
JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Kif1b kinesin family member 1B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif1c kinesin family member 1C IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:57,322,259...57,352,395
Ensembl chr10:57,322,331...57,351,353
JBrowse link
G Sybu syntabulin IMP RGD PMID:17611281 RGD:13217407 NCBI chr 7:83,600,614...83,670,121
Ensembl chr 7:83,600,617...83,670,356
JBrowse link
dense core granule cytoskeletal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A IMP PMID:30021165
PMID:29166604
UniProt PMID:30021165, PMID:29166604 RGD:14995321, RGD:15023486 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 ISO (PMID:30021165) RGD PMID:30021165 NCBI chr 7:48,548,932...49,045,852
Ensembl chr 7:48,867,664...49,042,455
JBrowse link
G Syt4 synaptotagmin 4 IMP
ISO
PMID:29166604
(MGI:6104122|PMID:29166604)
RGD PMID:29166604, PMID:29166604 MGI:6104122, RGD:15023486 NCBI chr18:24,172,580...24,181,989
Ensembl chr18:24,172,587...24,182,012
JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr10:93,811,350...94,132,418
Ensembl chr10:93,811,350...94,127,697
JBrowse link
early endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd3 EH-domain containing 3 IEA
ISO
GO_REF:0000107
(PMID:19139087)
Ensembl
RGD
PMID:19139087 GO_REF:0000107 NCBI chr 6:25,076,012...25,102,457
Ensembl chr 6:25,074,955...25,100,977
JBrowse link
G Lman1 lectin, mannose-binding, 1 NOT ISO (PMID:18287528) RGD PMID:18287528 NCBI chr18:61,683,377...61,707,344
Ensembl chr18:61,685,117...61,707,317
JBrowse link
G Rab6a RAB6A, member RAS oncogene family ISO
IEA
(PMID:17562788)
GO_REF:0000107
RGD
Ensembl
PMID:17562788 GO_REF:0000107 NCBI chr 1:165,624,973...165,664,201
Ensembl chr 1:165,625,058...165,664,192
JBrowse link
G Rbsn rabenosyn, RAB effector ISO (PMID:19139087) RGD PMID:19139087 NCBI chr 4:124,050,559...124,080,919
Ensembl chr 4:124,052,300...124,080,906
JBrowse link
G Snx1 sorting nexin 1 ISO
IBA
(PMID:15498486)
PMID:21873635
RGD PMID:15498486, PMID:21873635 RGD:13792537 NCBI chr 8:71,745,687...71,786,182
Ensembl chr 8:71,745,896...71,784,551
JBrowse link
G Snx2 sorting nexin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:48,132,386...48,173,974
Ensembl chr18:48,132,414...48,173,971
JBrowse link
G Snx8 sorting nexin 8 ISO (PMID:19782049) RGD PMID:19782049 NCBI chr12:16,340,917...16,389,500
Ensembl chr12:16,340,922...16,389,497
JBrowse link
G Stx5 syntaxin 5 ISO (PMID:17389686) RGD PMID:17389686 NCBI chr 1:224,939,497...224,955,658
Ensembl chr 1:224,939,497...224,955,657
JBrowse link
G Surf4 surfeit 4 NOT ISO (PMID:18287528) RGD PMID:18287528 NCBI chr 3:5,468,284...5,481,447
Ensembl chr 3:5,461,770...5,483,239
JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 NOT ISO (PMID:18287528) RGD PMID:18287528 NCBI chr17:9,560,735...9,565,249
Ensembl chr17:9,560,761...9,565,249
JBrowse link
G Trappc10 trafficking protein particle complex 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:11,168,298...11,228,634
Ensembl chr20:11,168,298...11,228,625
JBrowse link
early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aktip AKT interacting protein ISO
ISS
(PMID:18799622)
GO_REF:0000024
RGD
UniProt
PMID:18799622 GO_REF:0000024 NCBI chr19:17,290,048...17,300,054
Ensembl chr19:17,290,178...17,300,050
JBrowse link
G Ankrd27 ankyrin repeat domain 27 ISO
IBA
(PMID:16525121)
PMID:21873635
RGD PMID:16525121, PMID:21873635 RGD:13792537 NCBI chr 1:91,857,048...91,958,763
Ensembl chr 1:91,857,057...91,958,763
JBrowse link
G Becn1 beclin 1 ISO
ISS
(PMID:26783301)
GO_REF:0000024
RGD
UniProt
PMID:26783301 GO_REF:0000024 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Emp2 epithelial membrane protein 2 ISS
ISO
GO_REF:0000024
(MGI:5607239|PMID:18400107)
UniProt
RGD
PMID:18400107 GO_REF:0000024, MGI:5607239 NCBI chr10:5,433,248...5,467,840
Ensembl chr10:5,433,248...5,467,839
JBrowse link
G Fam160a2 family with sequence similarity 160, member A2 ISO
ISS
(PMID:18799622)
GO_REF:0000024
RGD
UniProt
PMID:18799622 GO_REF:0000024 NCBI chr 1:170,216,505...170,238,898
Ensembl chr 1:170,212,817...170,238,890
JBrowse link
G Flna filamin A ISO (MGI:1326769|PMID:9412467) RGD PMID:9412467 MGI:1326769 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Hap1 huntingtin-associated protein 1 TAS RGD PMID:12021262 RGD:625566 NCBI chr10:88,257,975...88,266,210
Ensembl chr10:88,257,976...88,266,210
JBrowse link
G Hook1 hook microtubule-tethering protein 1 ISO (PMID:18799622) RGD PMID:18799622 NCBI chr 5:114,940,053...115,000,691
Ensembl chr 5:114,940,053...115,000,691
JBrowse link
G Hook2 hook microtubule-tethering protein 2 ISO (PMID:18799622) RGD PMID:18799622 NCBI chr19:26,106,713...26,119,353
Ensembl chr19:26,106,838...26,119,352
JBrowse link
G Hook3 hook microtubule-tethering protein 3 ISO (PMID:18799622) RGD PMID:18799622 NCBI chr16:70,710,347...70,818,789 JBrowse link
G Kif16b kinesin family member 16B ISO (PMID:15882625) RGD PMID:15882625 NCBI chr 3:136,596,621...136,936,809
Ensembl chr 3:136,657,480...136,936,674
JBrowse link
G Lmtk2 lemur tyrosine kinase 2 ISO (PMID:18429820) RGD PMID:18429820 NCBI chr12:12,409,876...12,546,111
Ensembl chr12:12,409,876...12,546,111
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 ISO
ISS
(PMID:14617358)
GO_REF:0000024
RGD
UniProt
PMID:14617358 GO_REF:0000024 NCBI chr18:22,964,121...23,047,896
Ensembl chr18:22,964,210...23,047,895
JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 IEA
ISO
GO_REF:0000107
(PMID:24821423)
Ensembl
RGD
PMID:24821423 GO_REF:0000107 NCBI chr 8:118,628,777...118,651,238
Ensembl chr 8:118,628,777...118,651,238
JBrowse link
G Rab5a RAB5A, member RAS oncogene family ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 9:5,910...6,065 JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO
ISS
(PMID:14617358)
(PMID:8522602)
GO_REF:0000024
RGD
UniProt
PMID:8522602, PMID:14617358 GO_REF:0000024 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Rilp Rab interacting lysosomal protein ISO
IBA
(PMID:17959629)
PMID:21873635
RGD PMID:17959629, PMID:21873635 RGD:13792537 NCBI chr10:63,658,451...63,662,428
Ensembl chr10:63,659,085...63,662,050
JBrowse link
G Snf8 SNF8 subunit of ESCRT-II ISO (PMID:17714434) RGD PMID:17714434 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
G Snx16 sorting nexin 16 IDA
IBA
ISO
IEA
PMID:21873635
(PMID:12813048)
GO_REF:0000107
RGD
Ensembl
PMID:12813048, PMID:12813048, PMID:21873635 GO_REF:0000107, RGD:737670, RGD:13792537 NCBI chr 2:93,518,796...93,541,056
Ensembl chr 2:93,518,806...93,540,328
JBrowse link
G Stx8 syntaxin 8 ISO (PMID:10564279) RGD PMID:10564279 NCBI chr10:54,512,922...54,753,302
Ensembl chr10:54,512,983...54,753,302
JBrowse link
G Wdr81 WD repeat domain 81 ISS
ISO
GO_REF:0000024
(PMID:26783301), (PMID:27126989)
UniProt
RGD
PMID:26783301, PMID:27126989 GO_REF:0000024 NCBI chr10:62,273,817...62,287,213
Ensembl chr10:62,273,800...62,287,189
JBrowse link
G Wdr91 WD repeat domain 91 ISS
ISO
GO_REF:0000024
(PMID:26783301), (PMID:27126989)
UniProt
RGD
PMID:26783301, PMID:27126989 GO_REF:0000024 NCBI chr 4:62,398,073...62,438,958
Ensembl chr 4:62,398,797...62,438,958
JBrowse link
early endosome to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coro1a coronin 1A ISO MGI:3778894 (MGI:5559799|PMID:24270184) RGD PMID:24270184 MGI:5559799 NCBI chr 1:198,123,883...198,128,890
Ensembl chr 1:198,123,884...198,128,857
JBrowse link
G Myo1d myosin ID ISO (PMID:11208135) RGD PMID:11208135 NCBI chr10:67,866,939...68,142,864
Ensembl chr10:67,866,940...68,142,864
JBrowse link
Golgi to endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap4m1 adaptor related protein complex 4 subunit mu 1 ISO
ISS
(PMID:20230749)
GO_REF:0000024
RGD
UniProt
PMID:20230749 GO_REF:0000024 NCBI chr12:19,314,222...19,320,339
Ensembl chr12:19,314,251...19,320,142
JBrowse link
G Coro7 coronin 7 ISO
ISS
(PMID:24768539)
GO_REF:0000024
RGD
UniProt
PMID:24768539 GO_REF:0000024 NCBI chr10:11,090,200...11,144,289
Ensembl chr10:11,090,314...11,143,881
JBrowse link
G Dop1a DOP1 leucine zipper like protein A IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:94,122,733...94,225,131
Ensembl chr 8:94,122,728...94,225,031
JBrowse link
G Dop1b DOP1 leucine zipper like protein B IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:33,929,142...34,027,447
Ensembl chr11:33,925,498...34,027,435
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 ISO (PMID:24768539) RGD PMID:24768539 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ISO (PMID:23386609) RGD PMID:23386609 NCBI chr 1:265,904,616...266,033,107
Ensembl chr 1:265,904,566...266,033,156
JBrowse link
G Kif16b kinesin family member 16B ISO (MGI:4889011|PMID:21238925) RGD PMID:21238925 MGI:4889011 NCBI chr 3:136,596,621...136,936,809
Ensembl chr 3:136,657,480...136,936,674
JBrowse link
G Klhl20 kelch-like family member 20 ISO
IBA
ISS
(PMID:24768539)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24768539, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr13:78,912,361...78,957,226
Ensembl chr13:78,912,361...78,957,212
JBrowse link
G Rab14 RAB14, member RAS oncogene family TAS
ISO
IBA
ISS
IEA
PMID:15004230
(MGI:4889011|PMID:21238925)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:21238925, PMID:15004230, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:4889011, RGD:8554557, RGD:13792537 NCBI chr 3:14,373,270...14,395,357
Ensembl chr 3:14,373,275...14,395,362
JBrowse link
G Slc30a6 solute carrier family 30 member 6 ISO (MGI:2183269|PMID:11997387) RGD PMID:11997387 MGI:2183269 NCBI chr 6:22,197,003...22,226,364
Ensembl chr 6:22,197,040...22,226,421
JBrowse link
G Sort1 sortilin 1 ISO
IBA
(PMID:11331584)
PMID:21873635
RGD PMID:11331584, PMID:21873635 RGD:13792537 NCBI chr 2:211,078,092...211,156,312
Ensembl chr 2:211,078,334...211,156,312
JBrowse link
G Sys1 Sys1 golgi trafficking protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,908,779...160,913,281
Ensembl chr 3:160,908,769...160,912,507
JBrowse link
G Tgoln2 trans-golgi network protein 2 TAS RGD PMID:9693371 RGD:724780 NCBI chr 4:100,475,415...100,483,229
Ensembl chr 4:100,475,416...100,483,168
JBrowse link
Golgi to lysosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfy1 ankyrin repeat and FYVE domain containing 1 ISO (PMID:22284051) RGD PMID:22284051 NCBI chr10:59,259,955...59,331,669
Ensembl chr10:59,259,955...59,331,669
JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 ISO (PMID:23632890) RGD PMID:23632890 NCBI chr19:41,805,252...41,860,076 JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 ISO
IBA
ISS
(PMID:11139587)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:11139587, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:19,314,222...19,320,339
Ensembl chr12:19,314,251...19,320,142
JBrowse link
G Ccdc91 coiled-coil domain containing 91 ISO
IBA
ISS
(PMID:17596511)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:17596511, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:181,873,465...182,043,593
Ensembl chr 4:181,874,861...182,043,593
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:18817525) RGD PMID:18817525 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Ehd3 EH-domain containing 3 IEA
ISO
GO_REF:0000107
(PMID:19139087)
Ensembl
RGD
PMID:19139087 GO_REF:0000107 NCBI chr 6:25,076,012...25,102,457
Ensembl chr 6:25,074,955...25,100,977
JBrowse link
G Gak cyclin G associated kinase IEA
ISO
GO_REF:0000107
(PMID:16155256)
Ensembl
RGD
PMID:16155256 GO_REF:0000107 NCBI chr14:2,100,104...2,174,332
Ensembl chr14:2,100,106...2,174,318
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 ISO (PMID:23632890) RGD PMID:23632890 NCBI chr16:81,689,576...81,714,341
Ensembl chr16:81,689,335...81,714,419
JBrowse link
G Rbsn rabenosyn, RAB effector ISO (PMID:19139087) RGD PMID:19139087 NCBI chr 4:124,050,559...124,080,919
Ensembl chr 4:124,052,300...124,080,906
JBrowse link
late endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcc2 GRIP and coiled-coil domain containing 2 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:16885419)
Ensembl
UniProt
RGD
PMID:16885419, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr20:27,832,960...27,879,764
Ensembl chr20:27,832,932...27,879,759
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,044,544...167,091,453
Ensembl chr 1:167,051,209...167,091,453
JBrowse link
G Rab7b Rab7b, member RAS oncogene family ISO (PMID:20375062) RGD PMID:20375062 NCBI chr13:48,456,143...48,483,714
Ensembl chr13:48,455,923...48,482,138
JBrowse link
G Sgsm2 small G protein signaling modulator 2 ISO (PMID:21808068) RGD PMID:21808068 NCBI chr10:61,703,837...61,745,110
Ensembl chr10:61,703,839...61,745,097
JBrowse link
G Snx12 sorting nexin 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:70,989,822...71,127,330
Ensembl chr  X:70,989,822...71,127,278
JBrowse link
G Snx3 sorting nexin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390
JBrowse link
negative regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snx12 sorting nexin 12 ISO (PMID:22719997) RGD PMID:22719997 NCBI chr  X:70,989,822...71,127,330
Ensembl chr  X:70,989,822...71,127,278
JBrowse link
G Snx3 sorting nexin 3 ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390
JBrowse link
negative regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfip1 ADP-ribosylation factor interacting protein 1 IEA
ISO
GO_REF:0000107
(PMID:25789876)
Ensembl
RGD
PMID:25789876 GO_REF:0000107 NCBI chr 2:183,503,250...183,582,798
Ensembl chr 2:183,504,330...183,582,553
JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Trim46 tripartite motif-containing 46 IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:188,548,608...188,561,617
Ensembl chr 2:188,548,644...188,561,360
JBrowse link
positive regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab2 DAB adaptor protein 2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Ezr ezrin ISO UniProtKB:P26038|UniProtKB:P35241 (PMID:21148287) RGD PMID:21148287 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Msn moesin IEA
ISO
GO_REF:0000107
UniProtKB:P15311|UniProtKB:P35241 (PMID:21148287)
Ensembl
RGD
PMID:21148287 GO_REF:0000107 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Mtmr2 myotubularin related protein 2 IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:12,283,471...12,334,014
Ensembl chr 8:12,284,528...12,333,316
JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 IEA
ISO
GO_REF:0000107
(PMID:21724833)
Ensembl
RGD
PMID:21724833 GO_REF:0000107 NCBI chr 8:118,628,777...118,651,238
Ensembl chr 8:118,628,777...118,651,238
JBrowse link
G Rab21 RAB21, member RAS oncogene family ISO (PMID:15561770) RGD PMID:15561770 NCBI chr 7:58,261,985...58,286,770
Ensembl chr 7:58,261,992...58,286,770
JBrowse link
G Rdx radixin ISO UniProtKB:P15311|UniProtKB:P26038 (PMID:21148287) RGD PMID:21148287 NCBI chr 8:56,570,728...56,612,851
Ensembl chr 8:56,585,396...56,610,612
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes ISO (PMID:21148287) RGD PMID:21148287 NCBI chr 8:48,677,492...48,692,295
Ensembl chr 8:48,677,492...48,692,295
JBrowse link
positive regulation of early endosome to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sorl1 sortilin related receptor 1 ISO (PMID:22621900) RGD PMID:22621900 NCBI chr 8:46,228,077...46,287,171 JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
positive regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eipr1 EARP complex and GARP complex interacting protein 1 ISS
ISO
GO_REF:0000024
(PMID:27440922)
UniProt
RGD
PMID:27440922 GO_REF:0000024 NCBI chr 6:48,021,771...48,135,241
Ensembl chr 6:48,021,771...48,135,241
JBrowse link
recycling endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcc2 GRIP and coiled-coil domain containing 2 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:17488291)
Ensembl
UniProt
RGD
PMID:17488291, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr20:27,832,960...27,879,764
Ensembl chr20:27,832,932...27,879,759
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,044,544...167,091,453
Ensembl chr 1:167,051,209...167,091,453
JBrowse link
G Tbc1d14 TBC1 domain family, member 14 IEA
ISO
GO_REF:0000107
(PMID:17562788)
Ensembl
RGD
PMID:17562788 GO_REF:0000107 NCBI chr14:79,172,272...79,438,765
Ensembl chr14:79,205,466...79,438,764
JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk8 mitogen-activated protein kinase 8 IDA PMID:29166604 UniProt PMID:29166604 RGD:15023486 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Dennd10 DENN domain containing 10 ISO (PMID:30771381) RGD PMID:30771381 NCBI chr 1:282,188,080...282,211,588
Ensembl chr 1:282,188,110...282,210,580
JBrowse link
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 ISO (PMID:18256511) RGD PMID:18256511 NCBI chr 8:112,697,907...112,830,445
Ensembl chr 8:112,698,348...112,807,598
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 TAS PMID:19565474 UniProt PMID:19565474 RGD:8553538 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 TAS PMID:19565474 UniProt PMID:19565474 RGD:8553538 NCBI chr 7:11,458,971...11,478,520
Ensembl chr 7:11,458,967...11,478,489
JBrowse link
G Mapk1 mitogen activated protein kinase 1 TAS PMID:19565474 UniProt PMID:19565474 RGD:8553538 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 TAS PMID:19565474 UniProt PMID:19565474 RGD:8553538 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 IMP RGD PMID:18768694 RGD:13504749 NCBI chr 2:250,709,812...250,744,216
Ensembl chr 2:250,709,439...250,744,196
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:21724833) RGD PMID:21724833 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
regulation of early endosome to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 ISO (PMID:18256511) RGD PMID:18256511 NCBI chr 8:112,697,907...112,830,445
Ensembl chr 8:112,698,348...112,807,598
JBrowse link
regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 ISO
IBA
UniProtKB:Q7KVL7 (PMID:23395371)
PMID:21873635
RGD PMID:23395371, PMID:21873635 RGD:13792537 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Rab29 RAB29, member RAS oncogene family IMP PMID:23395371 ParkinsonsUK-UCL PMID:23395371 RGD:8553873 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220
JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Kif1b kinesin family member 1B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif1c kinesin family member 1C IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:57,322,259...57,352,395
Ensembl chr10:57,322,331...57,351,353
JBrowse link
G Kif5a kinesin family member 5A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G Kif5b kinesin family member 5B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfy1 ankyrin repeat and FYVE domain containing 1 ISO (PMID:22284051) RGD PMID:22284051 NCBI chr10:59,259,955...59,331,669
Ensembl chr10:59,259,955...59,331,669
JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 ISO (MGI:5608551|PMID:24928897) RGD PMID:24928897 MGI:5608551 NCBI chr12:22,665,128...22,676,079
Ensembl chr12:22,665,112...22,676,075
JBrowse link
G Arfrp1 ADP-ribosylation factor related protein 1 ISO (PMID:16129887) RGD PMID:16129887 NCBI chr 3:176,857,667...176,865,105
Ensembl chr 3:176,859,151...176,865,103
JBrowse link
G Arl1 ADP-ribosylation factor like GTPase 1 ISO
ISS
(PMID:19224922)
GO_REF:0000024
RGD
UniProt
PMID:19224922 GO_REF:0000024 NCBI chr 7:29,282,411...29,293,455
Ensembl chr 7:29,282,305...29,293,399
JBrowse link
G Baiap3 BAI1-associated protein 3 ISO (PMID:28626000) RGD PMID:28626000 NCBI chr10:14,601,133...14,613,881
Ensembl chr10:14,599,197...14,613,878
JBrowse link
G Bet1l Bet1 golgi vesicular membrane trafficking protein-like ISO
IBA
IEA
(PMID:15215310)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15215310, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:213,602,836...213,606,507
Ensembl chr 1:213,602,850...213,605,643
JBrowse link
G Cln5 CLN5, intracellular trafficking protein ISO (PMID:22431521) RGD PMID:22431521 NCBI chr15:93,634,815...93,644,146 JBrowse link
G Cltc clathrin heavy chain ISO (PMID:20065094) RGD PMID:20065094 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Dctn1 dynactin subunit 1 ISO
IEA
(PMID:19619496)
GO_REF:0000107
RGD
Ensembl
PMID:19619496 GO_REF:0000107 NCBI chr 4:114,876,770...114,896,567
Ensembl chr 4:114,876,770...114,896,573
JBrowse link
G Dennd2a DENN domain containing 2A ISO
IBA
(PMID:20937701)
PMID:21873635
RGD PMID:20937701, PMID:21873635 RGD:13792537 NCBI chr 4:67,242,257...67,342,993
Ensembl chr 4:67,242,271...67,301,102
JBrowse link
G Dennd5a DENN domain containing 5A ISO (PMID:19619496) RGD PMID:19619496 NCBI chr 1:174,524,047...174,588,553
Ensembl chr 1:174,524,047...174,588,529
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 ISS
ISO
GO_REF:0000024
(MGI:2182501|PMID:11929610)
ParkinsonsUK-UCL
RGD
PMID:11929610 GO_REF:0000024, MGI:2182501 NCBI chr 4:152,087,393...152,380,023
Ensembl chr 4:152,087,379...152,380,184
JBrowse link
G Evi5 ecotropic viral integration site 5 ISO (PMID:17562788) RGD PMID:17562788 NCBI chr14:2,892,738...3,038,237
Ensembl chr14:2,892,753...3,038,237
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ISO (PMID:12808027) RGD PMID:12808027 NCBI chr 1:265,904,616...266,033,107
Ensembl chr 1:265,904,566...266,033,156
JBrowse link
G Gcc2 GRIP and coiled-coil domain containing 2 ISO (PMID:17488291) RGD PMID:17488291 NCBI chr20:27,832,960...27,879,764
Ensembl chr20:27,832,932...27,879,759
JBrowse link
G Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 ISO (PMID:15886016) RGD PMID:15886016 NCBI chr 7:120,102,596...120,119,738
Ensembl chr 7:120,106,901...120,119,737
JBrowse link
G Gosr1 golgi SNAP receptor complex member 1 ISO (PMID:15215310) RGD PMID:15215310 NCBI chr10:63,405,526...63,442,257
Ensembl chr10:63,405,586...63,442,250
JBrowse link
G Gosr2 golgi SNAP receptor complex member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,735,772...91,756,123
Ensembl chr10:91,736,780...91,756,081
JBrowse link
G Heatr5a HEAT repeat containing 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:72,648,654...72,750,202
Ensembl chr 6:72,648,662...72,750,170
JBrowse link
G Heatr5b HEAT repeat containing 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:1,330,314...1,410,339
Ensembl chr 6:1,330,314...1,410,339
JBrowse link
G LOC100911994 coiled-coil domain-containing protein 132-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:31,332,759...31,352,476
Ensembl chr 4:31,333,970...31,351,942
JBrowse link
G Magel2 MAGE family member L2 ISO (PMID:23452853) RGD PMID:23452853 NCBI chr 1:123,015,404...123,019,945
Ensembl chr 1:123,015,746...123,019,522
JBrowse link
G Pheta1 PH domain containing endocytic trafficking adaptor 1 ISO
IBA
(PMID:21233288)
PMID:21873635
RGD PMID:21233288, PMID:21873635 RGD:13792537 NCBI chr12:40,225,316...40,230,573
Ensembl chr12:40,226,593...40,227,297
JBrowse link
G Pheta2 PH domain containing endocytic trafficking adaptor 2 ISO
IBA
(PMID:21233288)
PMID:21873635
RGD PMID:21233288, PMID:21873635 RGD:13792537 NCBI chr 7:123,572,153...123,578,590
Ensembl chr 7:123,573,930...123,578,551
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing ISO (PMID:14551253), (PMID:16954148) RGD PMID:14551253, PMID:16954148 NCBI chr 9:71,911,744...72,005,816
Ensembl chr 9:71,915,421...72,005,838
JBrowse link
G Plekhj1 pleckstrin homology domain containing J1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,784,314...11,786,476
Ensembl chr 7:11,784,341...11,786,475
JBrowse link
G Prepl prolyl endopeptidase-like ISS
ISO
IEA
GO_REF:0000024
(MGI:6316362|PMID:23321636)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23321636 GO_REF:0000024, GO_REF:0000107, MGI:6316362 NCBI chr 6:8,316,861...8,346,293
Ensembl chr 6:8,318,979...8,346,197
JBrowse link
G Rab29 RAB29, member RAS oncogene family ISO
ISS
(PMID:24788816)
GO_REF:0000024
RGD
UniProt
PMID:24788816 GO_REF:0000024 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220
JBrowse link
G Rab6a RAB6A, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:165,624,973...165,664,201
Ensembl chr 1:165,625,058...165,664,192
JBrowse link
G Rab6b RAB6B, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:111,600,375...111,668,817
Ensembl chr 8:111,600,532...111,668,808
JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO (PMID:19531583) RGD PMID:19531583 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Rab9a RAB9A, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:29,525,256...29,547,295
Ensembl chr  X:29,525,256...29,547,294
JBrowse link
G Rab9b RAB9B, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:107,531,404...107,542,510
Ensembl chr  X:107,531,404...107,542,510
JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 ISO
IBA
(PMID:23091056)
PMID:21873635
RGD PMID:23091056, PMID:21873635 RGD:13792537 NCBI chr 5:59,080,290...59,088,777
Ensembl chr 5:59,080,765...59,088,523
JBrowse link
G Rhobtb3 Rho-related BTB domain containing 3 ISO (PMID:19490898) RGD PMID:19490898 NCBI chr 2:2,627,655...2,683,305
Ensembl chr 2:2,627,393...2,683,116
JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 ISO
IBA
(PMID:23091056)
PMID:21873635
RGD PMID:23091056, PMID:21873635 RGD:13792537 NCBI chr 1:247,688,778...247,784,219
Ensembl chr 1:247,688,789...247,781,875
JBrowse link
G Rnf126 ring finger protein 126 ISO (PMID:24275455) RGD PMID:24275455 NCBI chr 7:12,820,796...12,828,325
Ensembl chr 7:12,820,840...12,828,334
JBrowse link
G Slc66a2 solute carrier family 66 member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:76,768,466...76,805,773
Ensembl chr18:76,770,012...76,805,766
JBrowse link
G Snx1 sorting nexin 1 ISO
ISS
(PMID:18088323)
GO_REF:0000024
RGD
UniProt
PMID:18088323 GO_REF:0000024 NCBI chr 8:71,745,687...71,786,182
Ensembl chr 8:71,745,896...71,784,551
JBrowse link
G Snx2 sorting nexin 2 ISO (PMID:20138391) RGD PMID:20138391 NCBI chr18:48,132,386...48,173,974
Ensembl chr18:48,132,414...48,173,971
JBrowse link
G Snx32 sorting nexin 32 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,873,782...220,890,804
Ensembl chr 1:220,874,717...220,878,059
JBrowse link
G Snx5 sorting nexin 5 ISO
IBA
(PMID:17148574)
PMID:21873635
RGD PMID:17148574, PMID:21873635 RGD:13792537 NCBI chr 3:138,378,032...138,397,944
Ensembl chr 3:138,378,202...138,397,870
JBrowse link
G Snx6 sorting nexin 6 ISO
IBA
(PMID:19935774)
PMID:21873635
RGD PMID:19935774, PMID:21873635 RGD:13792537 NCBI chr 6:75,626,927...75,670,172
Ensembl chr 6:75,626,927...75,670,135
JBrowse link
G Spag9 sperm associated antigen 9 ISO (PMID:19056739) RGD PMID:19056739 NCBI chr10:81,693,736...81,827,562
Ensembl chr10:81,693,770...81,827,562
JBrowse link
G Stx16 syntaxin 16 ISO (PMID:15215310), (PMID:17389686), (PMID:18195106) RGD PMID:15215310, PMID:17389686, PMID:18195106 NCBI chr 3:172,154,739...172,183,699
Ensembl chr 3:172,154,754...172,183,732
JBrowse link
G Stx5 syntaxin 5 ISO (PMID:15215310) RGD PMID:15215310 NCBI chr 1:224,939,497...224,955,658
Ensembl chr 1:224,939,497...224,955,657
JBrowse link
G Stx6 syntaxin 6 ISO
IBA
(PMID:19224922)
PMID:21873635
RGD PMID:19224922, PMID:21873635 RGD:13792537 NCBI chr13:72,804,218...72,850,757
Ensembl chr13:72,804,218...72,852,967
JBrowse link
G Tbc1d10a TBC1 domain family, member 10a ISO (PMID:17562788) RGD PMID:17562788 NCBI chr14:84,417,320...84,445,034
Ensembl chr14:84,417,320...84,445,034
JBrowse link
G Tbc1d10b TBC1 domain family, member 10b ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:198,641,018...198,652,674
Ensembl chr 1:198,641,018...198,652,674
JBrowse link
G Tbc1d10c TBC1 domain family, member 10C ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:219,431,094...219,439,102
Ensembl chr 1:219,431,997...219,438,779
JBrowse link
G Tbc1d17 TBC1 domain family, member 17 ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:100,836,993...100,845,216
Ensembl chr 1:100,836,990...100,845,392
JBrowse link
G Tbc1d23 TBC1 domain family, member 23 ISO (PMID:29084197) RGD PMID:29084197 NCBI chr11:45,401,396...45,459,841
Ensembl chr11:45,401,403...45,459,821
JBrowse link
G Tbc1d5 TBC1 domain family, member 5 ISO (PMID:22354992) RGD PMID:22354992 NCBI chr 9:1,144,641...1,747,732
Ensembl chr 9:1,145,700...1,746,397
JBrowse link
G Tmem87a transmembrane protein 87A ISO
IBA
UniProtKB:Q9P1Q0 (PMID:26157166)
PMID:21873635
RGD PMID:26157166, PMID:21873635 RGD:13792537 NCBI chr 3:112,128,138...112,174,097
Ensembl chr 3:112,132,351...112,174,269
JBrowse link
G Tmem87b transmembrane protein 87B ISO
IBA
UniProtKB:Q9P1Q0 (PMID:26157166)
PMID:21873635
RGD PMID:26157166, PMID:21873635 RGD:13792537 NCBI chr 3:121,357,787...121,393,443
Ensembl chr 3:121,358,003...121,393,443
JBrowse link
G Trim27 tripartite motif-containing 27 ISO (PMID:23452853) RGD PMID:23452853 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212
JBrowse link
G Ube2o ubiquitin-conjugating enzyme E2O ISO (PMID:23452853) RGD PMID:23452853 NCBI chr10:105,505,721...105,553,167
Ensembl chr10:105,506,955...105,552,986
JBrowse link
G Vamp3 vesicle-associated membrane protein 3 ISO
ISS
(PMID:18195106)
GO_REF:0000024
RGD
UniProt
PMID:18195106 GO_REF:0000024 NCBI chr 5:168,126,157...168,136,628
Ensembl chr 5:168,126,157...168,136,666
JBrowse link
G Vps26a VPS26 retromer complex component A ISO
IBA
ISS
(PMID:15078903)
(MGI:3040541|PMID:15078902)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15078902, PMID:15078903, PMID:21873635 GO_REF:0000024, MGI:3040541, RGD:13792537 NCBI chr20:32,085,465...32,115,310
Ensembl chr20:32,086,746...32,115,357
JBrowse link
G Vps26b VPS26 retromer complex component B IBA
ISO
PMID:21873635
(MGI:5607223|PMID:21920005)
RGD PMID:21920005, PMID:21873635 MGI:5607223, RGD:13792537 NCBI chr 8:28,054,407...28,075,514
Ensembl chr 8:28,054,407...28,075,514
JBrowse link
G Vps29 VPS29 retromer complex component IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr12:39,690,069...39,699,114
Ensembl chr12:39,690,069...39,699,113
JBrowse link
G Vps35 VPS35 retromer complex component IMP
IBA
ISO
PMID:23395371
PMID:21873635
(PMID:15078903), (PMID:26618722), (PMID:27385586)
RGD PMID:15078903, PMID:26618722, PMID:27385586, PMID:23395371, PMID:21873635 RGD:8553873, RGD:13792537 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
G Vps50 VPS50 subunit of EARP/GARPII complex NOT ISO
ISS
(PMID:25799061)
GO_REF:0000024
RGD
UniProt
PMID:25799061 GO_REF:0000024 NCBI chr 4:28,441,255...28,551,784
Ensembl chr 4:28,441,301...28,551,784
JBrowse link
G Vps51 VPS51 subunit of GARP complex ISO
IBA
(PMID:20685960), (PMID:25799061)
PMID:21873635
RGD PMID:20685960, PMID:25799061, PMID:21873635 RGD:13792537 Ensembl chr 1:221,430,648...221,440,467 JBrowse link
G Vps52 VPS52 subunit of GARP complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,431,997...5,441,736
Ensembl chr20:5,432,004...5,441,706
JBrowse link
G Vps53 VPS53 subunit of GARP complex ISO
IBA
(PMID:25799061)
PMID:21873635
RGD PMID:25799061, PMID:21873635 RGD:13792537 NCBI chr10:64,218,596...64,341,064
Ensembl chr10:64,222,276...64,341,109
JBrowse link
G Vps54 VPS54 subunit of GARP complex ISO
IBA
IEA
(PMID:25799061)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:25799061, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:106,153,407...106,207,715
Ensembl chr14:106,153,575...106,207,658
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:15215310), (PMID:18195106), (PMID:19224922)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15215310, PMID:18195106, PMID:19224922, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 1:276,310,072...276,508,635
Ensembl chr 1:276,309,927...276,490,602
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:102,340,261...102,353,612
Ensembl chr 6:102,339,857...102,353,403
JBrowse link
G Washc1 WASH complex subunit 1 ISS
ISO
GO_REF:0000024
(PMID:19922874), (PMID:23452853)
UniProt
RGD
PMID:19922874, PMID:23452853 GO_REF:0000024 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
G Washc2c WASH complex subunit 2C ISO
ISS
(PMID:19922874)
GO_REF:0000024
RGD
UniProt
PMID:19922874 GO_REF:0000024 NCBI chr 4:148,139,512...148,197,363
Ensembl chr 4:148,139,528...148,197,365
JBrowse link
G Ykt6 YKT6 v-SNARE homolog ISO (PMID:15215310) RGD PMID:15215310 NCBI chr14:86,196,018...86,207,057
Ensembl chr14:86,195,892...86,205,712
JBrowse link
vesicle targeting, trans-Golgi to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1ar adaptor-related protein complex 1 associated regulatory protein ISO
IBA
(PMID:19706427)
PMID:21873635
RGD PMID:19706427, PMID:21873635 RGD:13792537 NCBI chr 2:232,146,418...232,178,813
Ensembl chr 2:232,147,690...232,178,671
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 ISO (PMID:15020712) RGD PMID:15020712 NCBI chr10:97,859,730...97,896,949
Ensembl chr10:97,859,727...97,896,525
JBrowse link
vesicle-mediated cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt7 synaptotagmin 7 ISS
ISO
GO_REF:0000024
(MGI:5645834|PMID:25860611)
UniProt
RGD
PMID:25860611 GO_REF:0000024, MGI:5645834 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      cellular localization 2966
        intracellular transport 1514
          cytosolic transport 162
            Golgi to endosome transport + 15
            Golgi to lysosome transport 9
            cytoplasmic streaming 0
            cytoplasmic transport, nurse cell to oocyte + 0
            dense core granule transport + 13
            early endosome to late endosome transport + 40
            early endosome to recycling endosome transport + 4
            negative regulation of cytoplasmic transport + 3
            plastid to vacuole vesicle-mediated transport 0
            positive regulation of cytoplasmic transport + 13
            regulation of cytoplasmic transport + 28
            retrograde transport, endosome to Golgi + 88
            vesicle-mediated cholesterol transport + 1
Path 2
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular localization 2966
        establishment of localization in cell 2177
          intracellular transport 1514
            cytosolic transport 162
              Golgi to endosome transport + 15
              Golgi to lysosome transport 9
              cytoplasmic streaming 0
              cytoplasmic transport, nurse cell to oocyte + 0
              dense core granule transport + 13
              early endosome to late endosome transport + 40
              early endosome to recycling endosome transport + 4
              negative regulation of cytoplasmic transport + 3
              plastid to vacuole vesicle-mediated transport 0
              positive regulation of cytoplasmic transport + 13
              regulation of cytoplasmic transport + 28
              retrograde transport, endosome to Golgi + 88
              vesicle-mediated cholesterol transport + 1
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.