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ONTOLOGY REPORT - ANNOTATIONS


Term:histone deubiquitination
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Accession:GO:0016578 term browser browse the term
Definition:The modification of histones by removal of ubiquitin groups.
Synonyms:exact_synonym: histone deubiquitinylation;   histone deubiquitylation


show annotations for term's descendants       view all columns           Sort by:
 
histone deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn7 ataxin 7 JBrowse link 15 12,421,432 12,569,649 RGD:1624291
G Atxn7l3 ataxin 7-like 3 JBrowse link 10 90,234,749 90,241,757 RGD:1624291
RGD:13792537
G Eny2 ENY2, transcription and export complex 2 subunit JBrowse link 7 83,348,656 83,358,430 RGD:1624291
RGD:13792537
G Kat2a lysine acetyltransferase 2A JBrowse link 10 88,611,586 88,619,558 RGD:1624291
G Supt3h SPT3 homolog, SAGA and STAGA complex component JBrowse link 9 18,249,565 18,604,814 RGD:1624291
RGD:1600115
G Taf10 TATA-box binding protein associated factor 10 JBrowse link 1 170,585,160 170,586,428 RGD:1624291
G Trrap transformation/transcription domain-associated protein JBrowse link 12 11,537,950 11,627,563 RGD:1624291
G Usp16 ubiquitin specific peptidase 16 JBrowse link 11 27,101,213 27,130,345 RGD:1624291
RGD:1600115
G Usp21 ubiquitin specific peptidase 21 JBrowse link 13 89,655,016 89,661,150 RGD:1624291
RGD:1600115
G Usp22 ubiquitin specific peptidase 22 JBrowse link 10 47,429,201 47,453,298 RGD:1624291
G Usp3 ubiquitin specific peptidase 3 JBrowse link 8 72,207,970 72,284,871 RGD:1624291
RGD:13792537
G Usp36 ubiquitin specific peptidase 36 JBrowse link 10 107,292,828 107,324,355 RGD:1624291
G Usp51 ubiquitin specific peptidase 51 JBrowse link X 19,268,352 19,273,753 RGD:1624291
histone H2A K63-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 JBrowse link 9 9,863,380 9,865,920 RGD:1600115
RGD:13792537
RGD:1624291
G Uimc1 ubiquitin interaction motif containing 1 JBrowse link 17 10,061,915 10,130,921 RGD:1624291
RGD:1600115
RGD:13792537
G Usp16 ubiquitin specific peptidase 16 JBrowse link 11 27,101,213 27,130,345 RGD:1624291
RGD:1600115
histone H2B conserved C-terminal lysine deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epop elongin BC and polycomb repressive complex 2 associated protein JBrowse link 10 85,573,369 85,574,889 RGD:1624291
G Usp15 ubiquitin specific peptidase 15 JBrowse link 7 66,595,707 66,687,707 RGD:1600115
RGD:1624291
G Usp49 ubiquitin specific peptidase 49 JBrowse link 9 15,314,875 15,375,365 RGD:1624291
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1624291
RGD:1600115
monoubiquitinated histone H2A deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asxl1 ASXL transcriptional regulator 1 JBrowse link 3 148,832,231 148,902,356 RGD:1624291
RGD:1600115
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:1600115
RGD:1624291
G Mysm1 myb-like, SWIRM and MPN domains 1 JBrowse link 5 113,902,115 113,939,083 RGD:1624291
G Usp16 ubiquitin specific peptidase 16 JBrowse link 11 27,101,213 27,130,345 RGD:1624291
RGD:1600115
positive regulation of histone deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein JBrowse link 12 48,628,198 48,656,096 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11954
      organic substance metabolic process 11359
        macromolecule metabolic process 9815
          macromolecule modification 4099
            covalent chromatin modification 506
              histone modification 491
                histone deubiquitination 23
                  histone H2A K63-linked deubiquitination 3
                  histone H2B conserved C-terminal lysine deubiquitination 4
                  monoubiquitinated histone deubiquitination + 4
                  negative regulation of histone deubiquitination 0
                  positive regulation of histone deubiquitination 1
                  regulation of histone deubiquitination + 1
Path 2
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11954
      organic substance metabolic process 11359
        organonitrogen compound metabolic process 6979
          protein metabolic process 6075
            protein modification process 3895
              cellular protein modification process 3895
                protein modification by small protein conjugation or removal 932
                  protein modification by small protein removal 150
                    protein deubiquitination 121
                      histone deubiquitination 23
                        histone H2A K63-linked deubiquitination 3
                        histone H2B conserved C-terminal lysine deubiquitination 4
                        monoubiquitinated histone deubiquitination + 4
                        negative regulation of histone deubiquitination 0
                        positive regulation of histone deubiquitination 1
                        regulation of histone deubiquitination + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.