Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:histone deubiquitination
go back to main search page
Accession:GO:0016578 term browser browse the term
Definition:The modification of histones by removal of ubiquitin groups.
Synonyms:exact_synonym: histone deubiquitinylation;   histone deubiquitylation


show annotations for term's descendants       view all columns           Sort by:
 
histone deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATXN7 ataxin 7 JBrowse link 3 65,249,146 65,284,762 RGD:9068941
G ATXN7L3 ataxin 7 like 3 JBrowse link 17 13,362,215 13,369,667 RGD:9068941
G ENY2 ENY2 transcription and export complex 2 subunit JBrowse link 8 108,129,872 108,141,478 RGD:9068941
G KAT2A lysine acetyltransferase 2A JBrowse link 17 15,416,075 15,424,197 RGD:9068941
G SUPT3H SPT3 homolog, SAGA and STAGA complex component JBrowse link 6 45,687,038 46,239,155 RGD:9068941
G TAF10 TATA-box binding protein associated factor 10 JBrowse link 11 6,421,205 6,427,243 RGD:9068941
G TRRAP transformation/transcription domain associated protein JBrowse link 7 104,351,320 104,486,720 RGD:9068941
G USP16 ubiquitin specific peptidase 16 JBrowse link 21 28,843,680 28,876,267 RGD:9068941
G USP21 ubiquitin specific peptidase 21 JBrowse link 1 140,484,742 140,491,014 RGD:9068941
G USP22 ubiquitin specific peptidase 22 JBrowse link 17 35,468,177 35,511,672 RGD:9068941
G USP3 ubiquitin specific peptidase 3 JBrowse link 15 60,769,071 60,834,312 RGD:9068941
G USP36 ubiquitin specific peptidase 36 JBrowse link 17 78,416,541 78,461,683 RGD:9068941
G USP51 ubiquitin specific peptidase 51 RGD:9068941
histone H2A K63-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 JBrowse link X 154,389,179 154,431,616 RGD:9068941
G UIMC1 ubiquitin interaction motif containing 1 JBrowse link 5 179,272,208 179,390,215 RGD:9068941
G USP16 ubiquitin specific peptidase 16 JBrowse link 21 28,843,680 28,876,267 RGD:9068941
histone H2B conserved C-terminal lysine deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EPOP elongin BC and polycomb repressive complex 2 associated protein JBrowse link 17 18,875,095 18,878,349 RGD:9068941
G USP15 ubiquitin specific peptidase 15 JBrowse link 12 26,808,337 26,954,099 RGD:9068941
G USP49 ubiquitin specific peptidase 49 JBrowse link 6 42,678,680 42,781,748 RGD:9068941
G USP7 ubiquitin specific peptidase 7 JBrowse link 16 9,065,366 9,106,406 RGD:9068941
monoubiquitinated histone H2A deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ASXL1 ASXL transcriptional regulator 1 JBrowse link 20 29,773,836 29,852,433 RGD:9068941
G BAP1 BRCA1 associated protein 1 JBrowse link 3 53,573,785 53,581,943 RGD:9068941
G MYSM1 Myb like, SWIRM and MPN domains 1 JBrowse link 1 59,621,583 59,666,843 RGD:9068941
G USP16 ubiquitin specific peptidase 16 JBrowse link 21 28,843,680 28,876,267 RGD:9068941
positive regulation of histone deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SART3 spliceosome associated factor 3, U4/U6 recycling protein JBrowse link 12 109,490,261 109,529,091 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12491
    metabolic process 7938
      organic substance metabolic process 7624
        macromolecule metabolic process 6594
          macromolecule modification 3085
            covalent chromatin modification 416
              histone modification 402
                histone deubiquitination 23
                  histone H2A K63-linked deubiquitination 3
                  histone H2B conserved C-terminal lysine deubiquitination 4
                  monoubiquitinated histone deubiquitination + 4
                  negative regulation of histone deubiquitination 0
                  positive regulation of histone deubiquitination 1
                  regulation of histone deubiquitination + 1
Path 2
Term Annotations click to browse term
  biological_process 12491
    metabolic process 7938
      organic substance metabolic process 7624
        organonitrogen compound metabolic process 4617
          protein metabolic process 3983
            protein modification process 2949
              cellular protein modification process 2949
                protein modification by small protein conjugation or removal 655
                  protein modification by small protein removal 111
                    protein deubiquitination 97
                      histone deubiquitination 23
                        histone H2A K63-linked deubiquitination 3
                        histone H2B conserved C-terminal lysine deubiquitination 4
                        monoubiquitinated histone deubiquitination + 4
                        negative regulation of histone deubiquitination 0
                        positive regulation of histone deubiquitination 1
                        regulation of histone deubiquitination + 1
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.