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ONTOLOGY REPORT - ANNOTATIONS


Term:cytochrome complex assembly
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Accession:GO:0017004 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.
Synonyms:broad_synonym: cytochrome biogenesis


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cytochrome complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 JBrowse link 10 50,439,778 50,563,920 RGD:1624291
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:1624291
cytochrome c-heme linkage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hccs holocytochrome c synthase JBrowse link X 26,294,028 26,303,461 RGD:13792537
mitochondrial cytochrome c oxidase assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcs1l BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone JBrowse link 9 81,868,158 81,872,201 RGD:1624291
G Coa3 cytochrome C oxidase assembly factor 3 JBrowse link 10 89,198,750 89,199,731 RGD:1624291
G Coa4 cytochrome c oxidase assembly factor 4 homolog JBrowse link 1 165,549,319 165,552,573 RGD:1600115
G Coa5 cytochrome C oxidase assembly factor 5 JBrowse link 9 44,011,471 44,024,876 RGD:13792537
G Coa8 cytochrome c oxidase assembly factor 8 JBrowse link 6
6
136,185,772
136,279,476
136,210,936
136,304,317
RGD:1624291
RGD:1600115
G Cox14 cytochrome c oxidase assembly factor COX14 JBrowse link 7 141,378,537 141,380,960 RGD:1624291
RGD:13792537
RGD:1600115
G Cox16 cytochrome c oxidase assembly factor COX16 JBrowse link 6 105,195,387 105,214,366 RGD:1624291
RGD:13792537
G Cox17 cytochrome c oxidase copper chaperone COX17 JBrowse link 11 64,962,663 64,968,437 RGD:1624291
RGD:13792537
G Cox18 cytochrome c oxidase assembly factor COX18 JBrowse link 14 19,434,728 19,446,379 RGD:1624291
RGD:13792537
G Cox19 cytochrome c oxidase assembly factor COX19 JBrowse link 12 17,395,624 17,405,103 RGD:13792537
G Cox20 cytochrome c oxidase assembly factor COX20 JBrowse link 13 96,219,853 96,224,023 RGD:1624291
RGD:13792537
G Fastkd3 FAST kinase domains 3 JBrowse link 1 37,734,400 37,742,932 RGD:1624291
RGD:1600115
G LOC100912008 uncharacterized LOC100912008 JBrowse link 3 4,869,790 4,872,633 RGD:1600115
G Oxa1l OXA1L, mitochondrial inner membrane protein JBrowse link 15 33,004,957 33,012,584 RGD:13792537
G Pet100 PET100 cytochrome c oxidase chaperone JBrowse link 12 2,170,630 2,173,259 RGD:13792537
G Sco1 synthesis of cytochrome C oxidase 1 JBrowse link 10 53,595,854 53,608,437 RGD:1624291
RGD:13792537
G Smim20 small integral membrane protein 20 JBrowse link 14 60,057,493 60,069,870 RGD:1624291
G Surf1 SURF1, cytochrome c oxidase assembly factor JBrowse link 3 5,461,717 5,464,560 RGD:1600115
RGD:1624291
G Taco1 translational activator of cytochrome c oxidase I JBrowse link 10 94,260,148 94,268,276 RGD:1600115
RGD:1624291
G Timm21 translocase of inner mitochondrial membrane 21 JBrowse link 18 81,803,165 81,807,627 RGD:1624291
RGD:1600115
mitochondrial respiratory chain complex III assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcs1l BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone JBrowse link 9 81,868,158 81,872,201 RGD:1624291
RGD:13792537
G LOC686324 similar to Protein UNQ655/PRO1286 homolog precursor RGD:1600115
RGD:13792537
G LOC691921 hypothetical protein LOC691921 JBrowse link 7 27,221,184 27,224,277 RGD:1624291
G Lyrm7 LYR motif containing 7 JBrowse link 10 40,183,061 40,201,992 RGD:1624291
G RGD1561671 similar to RIKEN cDNA 2900010M23 JBrowse link 17 11,915,347 11,916,026 RGD:1600115
G Slc25a33 solute carrier family 25 member 33 JBrowse link 5 166,701,463 166,726,794 RGD:1624291
G Ttc19 tetratricopeptide repeat domain 19 JBrowse link 10 48,599,321 48,627,374 RGD:1624291
RGD:13792537
RGD:1600115
G Uqcc1 ubiquinol-cytochrome c reductase complex assembly factor 1 JBrowse link 3 151,384,965 151,474,112 RGD:1624291
RGD:13792537
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 20 5,712,200 5,723,902 RGD:1624291
RGD:1600115
G Uqcc3 ubiquinol-cytochrome c reductase complex assembly factor 3 JBrowse link 1 225,076,301 225,077,079 RGD:1624291
RGD:1600115
RGD:13792537
G Uqcr10 ubiquinol-cytochrome c reductase, complex III subunit X JBrowse link 14 84,935,480 84,937,741 RGD:13792537
G Uqcrb ubiquinol-cytochrome c reductase binding protein JBrowse link 7 71,264,501 71,269,869 RGD:13792537
respiratory chain complex IV assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Coa6 cytochrome c oxidase assembly factor 6 JBrowse link 19 59,327,328 59,333,706 RGD:1624291
RGD:1600115
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 JBrowse link 10 50,439,778 50,563,920 RGD:1624291
G Cox15 cytochrome c oxidase assembly homolog COX15 JBrowse link 1 263,494,850 263,511,510 RGD:1624291
G Cox18 cytochrome c oxidase assembly factor COX18 JBrowse link 14 19,434,728 19,446,379 RGD:1624291
G Mt-co3 mitochondrially encoded cytochrome c oxidase III JBrowse link MT 8,599 9,382 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19676
    cellular process 18449
      cellular component organization or biogenesis 6664
        cellular component organization 6424
          cellular component assembly 2941
            protein-containing complex assembly 1587
              cellular protein-containing complex assembly 1117
                cytochrome complex assembly 37
                  cytochrome P450 4A1-heme linkage 0
                  cytochrome b6f complex assembly 0
                  cytochrome c-heme linkage + 1
                  peroxidase-heme linkage + 0
                  protein-heme P460 linkage + 0
                  protein-heme linkage via 1'-L-histidine 0
                  respiratory chain complex III assembly + 12
                  respiratory chain complex IV assembly + 24
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.