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ONTOLOGY REPORT - ANNOTATIONS


Term:phenol-containing compound metabolic process
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Accession:GO:0018958 term browser browse the term
Definition:The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.
Comment:Note that phenol metabolism is not included as a child of 'xenobiotic metabolism' because although it is synthesized industrially, phenol is also found naturally in animal wastes and other organic materials. It is often formed by the activity of microorganisms, which can chemically modify a variety of xenobiotic and naturally occurring phenolic compounds.
Synonyms:exact_synonym: carbolic acid metabolic process;   carbolic acid metabolism;   hydroxybenzene metabolic process;   hydroxybenzene metabolism;   phenol-containing compound metabolism
 xref: UM-BBD_pathwayID:phe


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phenol-containing compound metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 JBrowse link 8 62,798,317 62,809,848 RGD:4831838
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 JBrowse link 1 266,422,127 266,429,947 RGD:4831838
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 JBrowse link 17 1,579,319 1,610,745 RGD:4890959
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 RGD:4890959
G Star steroidogenic acute regulatory protein JBrowse link 16 71,036,204 71,040,847 RGD:4831838
G Sult1b1 sulfotransferase family 1B member 1 JBrowse link 14 22,142,412 22,155,246 RGD:1624291
4-nitrophenol metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:1624291
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:2301074
catechol-containing compound metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:1624291
catecholamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crhr2 corticotropin releasing hormone receptor 2 JBrowse link 4 85,286,371 85,329,374 RGD:5131263
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:727571
G Hdc histidine decarboxylase JBrowse link 3 119,057,524 119,075,599 RGD:1600115
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:4139888
catecholamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:13792537
RGD:1600115
RGD:1624291
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing JBrowse link 1 166,985,468 166,989,681 RGD:1624291
RGD:13792537
RGD:1600115
G Maoa monoamine oxidase A JBrowse link X 6,554,698 6,620,722 RGD:629546
catecholamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1625401
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:13792537
G Mtpn myotrophin JBrowse link 4 63,012,009 63,039,422 RGD:625450
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:2301075
G Sult1d1 sulfotransferase family 1D, member 1 JBrowse link 14 22,107,418 22,126,011 RGD:1600115
dopamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:6903884
G Agtr2 angiotensin II receptor, type 2 JBrowse link X 119,389,480 119,393,845 RGD:6903884
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit JBrowse link 1 123,897,341 124,039,263 RGD:704388
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:5143981
G Dao D-amino-acid oxidase JBrowse link 12 48,353,691 48,373,647 RGD:1600115
RGD:1624291
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:4139893
RGD:1600115
G Gch1 GTP cyclohydrolase 1 JBrowse link 15 23,935,011 23,968,971 RGD:1624291
G Gpr37 G protein-coupled receptor 37 JBrowse link 4 51,822,163 51,844,228 RGD:1624291
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:1600115
RGD:1624291
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:1624291
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:1624291
RGD:1600115
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:1624291
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:1580046
RGD:13792537
RGD:1624291
RGD:5129111
RGD:5130972
dopamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:1624291
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1600115
RGD:13792537
RGD:1624291
G Maoa monoamine oxidase A JBrowse link X 6,554,698 6,620,722 RGD:1624291
RGD:1600115
G Moxd1 monooxygenase, DBH-like 1 JBrowse link 1 22,124,498 22,206,565 RGD:13792537
G Moxd2 monooxygenase, DBH-like 2 JBrowse link 4 69,117,477 69,125,972 RGD:13792537
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:1624291
dopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:1624291
RGD:13792537
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:1599723
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:727686
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:1624291
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:1624291
RGD:1600115
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing JBrowse link 1 166,985,468 166,989,681 RGD:13792537
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 JBrowse link 2 46,372,488 46,476,162 RGD:1624291
G Npr1 natriuretic peptide receptor 1 JBrowse link 2 189,840,403 189,857,032 RGD:1580153
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Sncaip synuclein, alpha interacting protein JBrowse link 18 47,739,284 47,877,679 RGD:1624291
RGD:1600115
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:1624291
RGD:1600115
G Spr sepiapterin reductase JBrowse link 4 116,912,343 116,916,073 RGD:1624291
epinephrine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnmt phenylethanolamine-N-methyltransferase JBrowse link 10 86,340,893 86,342,501 RGD:628457
RGD:1600115
RGD:4139902
RGD:4139901
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:1624291
epinephrine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
homogentisate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fah fumarylacetoacetate hydrolase JBrowse link 1 146,713,663 146,736,339 RGD:13792537
melanin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:1624291
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 JBrowse link X 72,128,996 72,133,692 RGD:1624291
RGD:1600115
G Dct dopachrome tautomerase JBrowse link 15 103,208,174 103,245,033 RGD:1624291
G Ddt D-dopachrome tautomerase JBrowse link 20 13,827,153 13,829,624 RGD:1600115
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
RGD:1600115
G Oca2 OCA2 melanosomal transmembrane protein JBrowse link 1 114,661,970 114,987,433 RGD:1624291
G Pmel premelanosome protein JBrowse link 7 3,133,347 3,143,827 RGD:1624291
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 JBrowse link 8 103,503,982 103,554,905 RGD:1624291
RGD:1600115
G Tyr tyrosinase JBrowse link 1 151,012,598 151,106,802 RGD:1624291
RGD:13792537
melanin biosynthetic process from tyrosine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dct dopachrome tautomerase JBrowse link 15 103,208,174 103,245,033 RGD:1624291
melanin metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:1624291
negative regulation of catecholamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
negative regulation of dopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:2289786
G Htr2c 5-hydroxytryptamine receptor 2C JBrowse link X 118,084,520 118,318,040 RGD:1625003
G Itgam integrin subunit alpha M JBrowse link 1 199,495,312 199,545,738 RGD:1624291
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:5129111
negative regulation of melanin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mfsd12 major facilitator superfamily domain containing 12 JBrowse link 7 11,214,832 11,223,713 RGD:1624291
G Rapgef2 Rap guanine nucleotide exchange factor 2 JBrowse link 2 177,836,191 178,057,378 RGD:1624291
RGD:1600115
G Slc24a5 solute carrier family 24 member 5 JBrowse link 3 117,335,212 117,354,480 RGD:1624291
G Wnt5a Wnt family member 5A JBrowse link 16 4,469,451 4,490,271 RGD:1624291
RGD:1600115
norepinephrine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:727567
RGD:13792537
RGD:1624291
RGD:1600115
RGD:1625403
G Epas1 endothelial PAS domain protein 1 JBrowse link 6 10,306,508 10,385,239 RGD:5128877
G Gata3 GATA binding protein 3 JBrowse link 17 72,419,752 72,452,043 RGD:1624291
RGD:1600115
G Insm1 INSM transcriptional repressor 1 JBrowse link 3 140,427,961 140,430,467 RGD:1624291
G Kl Klotho JBrowse link 12 942,974 987,206 RGD:10403068
G Moxd1 monooxygenase, DBH-like 1 JBrowse link 1 22,124,498 22,206,565 RGD:13792537
G Moxd2 monooxygenase, DBH-like 2 JBrowse link 4 69,117,477 69,125,972 RGD:13792537
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:1624291
norepinephrine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b1 aldo-keto reductase family 1 member B JBrowse link 4 61,706,866 61,720,959 RGD:8548769
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Epas1 endothelial PAS domain protein 1 JBrowse link 6 10,306,508 10,385,239 RGD:1624291
RGD:1600115
G Ly6e lymphocyte antigen 6 family member E JBrowse link 7 116,355,426 116,359,862 RGD:1624291
G Pnmt phenylethanolamine-N-methyltransferase JBrowse link 10 86,340,893 86,342,501 RGD:5130757
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Rnf180 ring finger protein 180 JBrowse link 2 35,718,100 35,892,578 RGD:1624291
RGD:1600115
G Rtl4 retrotransposon Gag like 4 JBrowse link X 115,908,999 116,402,406 RGD:1624291
G Spr sepiapterin reductase JBrowse link 4 116,912,343 116,916,073 RGD:1624291
octopamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:13792537
G Moxd1 monooxygenase, DBH-like 1 JBrowse link 1 22,124,498 22,206,565 RGD:13792537
G Moxd2 monooxygenase, DBH-like 2 JBrowse link 4 69,117,477 69,125,972 RGD:13792537
octopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1625401
positive regulation of dopamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epas1 endothelial PAS domain protein 1 JBrowse link 6 10,306,508 10,385,239 RGD:5128877
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:1624291
positive regulation of dopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abat 4-aminobutyrate aminotransferase JBrowse link 10 7,093,406 7,200,439 RGD:10047061
G Gpr37 G protein-coupled receptor 37 JBrowse link 4 51,822,163 51,844,228 RGD:1624291
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
G Maob monoamine oxidase B JBrowse link X 6,430,694 6,533,520 RGD:2316765
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:10448966
positive regulation of melanin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 JBrowse link 16 2,560,103 2,602,035 RGD:1624291
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:1624291
RGD:13792537
G Cdh3 cadherin 3 JBrowse link 19 38,668,957 38,719,801 RGD:1624291
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 19 24,786,604 24,798,231 RGD:1600115
RGD:1624291
G Pmel premelanosome protein JBrowse link 7 3,133,347 3,143,827 RGD:1624291
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
positive regulation of thyroid hormone generation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata3 GATA binding protein 3 JBrowse link 17 72,419,752 72,452,043 RGD:1600115
RGD:1624291
G Hpn hepsin JBrowse link 1 89,534,112 89,549,575 RGD:1624291
RGD:1600115
G Pax8 paired box 8 JBrowse link 3 1,527,316 1,586,019 RGD:1624291
RGD:1600115
G Slco1c1 solute carrier organic anion transporter family, member 1c1 JBrowse link 4 175,729,709 175,776,749 RGD:1624291
RGD:1600115
positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link 16 36,371,489 36,373,551 RGD:1624291
RGD:1600115
regulation of catecholamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:619592
regulation of dopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 2 189,088,570 189,096,785 RGD:1624291
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:1624291
RGD:1600115
G Drd4 dopamine receptor D4 JBrowse link 1 214,278,296 214,282,818 RGD:1624291
RGD:1600115
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:1624291
RGD:1600115
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:1624291
RGD:1600115
G Pde1b phosphodiesterase 1B JBrowse link 7 145,117,951 145,147,711 RGD:1624291
G Pnkd PNKD metallo-beta-lactamase domain containing JBrowse link 9 81,566,074 81,634,531 RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:1624291
G Tacr3 tachykinin receptor 3 JBrowse link 2 240,021,152 240,118,971 RGD:2305963
regulation of melanin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
regulation of thyroid hormone generation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Duoxa1 dual oxidase maturation factor 1 JBrowse link 3 114,241,057 114,251,720 RGD:1624291
G Duoxa2 dual oxidase maturation factor 2 JBrowse link 3 114,236,718 114,240,086 RGD:1624291
serotonin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:5129182
RGD:13792537
G Tph2 tryptophan hydroxylase 2 JBrowse link 7 58,042,279 58,149,220 RGD:1600115
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:11353778
G Tph1 tryptophan hydroxylase 1 JBrowse link 1 102,669,868 102,699,442 RGD:625621
serotonin metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 JBrowse link 4 145,704,779 145,948,997 RGD:1624291
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Btbd9 BTB domain containing 9 JBrowse link 20 8,899,286 9,253,936 RGD:1624291
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:1624291
RGD:1600115
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:1624291
RGD:1600115
G Maoa monoamine oxidase A JBrowse link X 6,554,698 6,620,722 RGD:1600709
RGD:1600713
G Pde1b phosphodiesterase 1B JBrowse link 7 145,117,951 145,147,711 RGD:1624291
G Rnf180 ring finger protein 180 JBrowse link 2 35,718,100 35,892,578 RGD:1624291
RGD:1600115
G Spr sepiapterin reductase JBrowse link 4 116,912,343 116,916,073 RGD:1624291
G Srd5a1 steroid 5 alpha-reductase 1 JBrowse link 1 36,320,504 36,354,694 RGD:4891926
thyroid hormone catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dio2 iodothyronine deiodinase 2 JBrowse link 6 114,475,156 114,489,443 RGD:1624291
G Dio3 iodothyronine deiodinase 3 JBrowse link 6 134,627,278 134,629,139 RGD:1624291
thyroid hormone generation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cga glycoprotein hormones, alpha polypeptide JBrowse link 5 50,362,491 50,393,368 RGD:1624291
RGD:13792537
G Cpq carboxypeptidase Q JBrowse link 7 71,709,174 72,167,413 RGD:8554022
RGD:13792537
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:1600115
RGD:1624291
G Ctsk cathepsin K JBrowse link 2 196,655,469 196,666,447 RGD:1600115
RGD:1624291
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:1624291
G Dio2 iodothyronine deiodinase 2 JBrowse link 6 114,475,156 114,489,443 RGD:1626436
G Duox1 dual oxidase 1 JBrowse link 3 114,251,794 114,286,827 RGD:1600115
G Duox2 dual oxidase 2 JBrowse link 3 114,218,187 114,237,808 RGD:632568
RGD:1600115
G Foxe1 forkhead box E1 JBrowse link 5 61,954,549 61,957,357 RGD:1624291
G Med1 mediator complex subunit 1 JBrowse link 10 86,101,560 86,145,271 RGD:1624291
G Slc16a10 solute carrier family 16 member 10 JBrowse link 20 45,138,433 45,260,155 RGD:1624291
RGD:1600115
G Slc16a2 solute carrier family 16 member 2 JBrowse link X 74,578,600 74,706,068 RGD:1624291
RGD:1600115
G Slc5a5 solute carrier family 5 member 5 JBrowse link 16 20,297,414 20,307,401 RGD:68854
RGD:1600115
G Tg thyroglobulin JBrowse link 7 107,467,260 107,652,897 RGD:728752
RGD:1624291
RGD:13792537
RGD:1600115
RGD:1600150
G Tpo thyroid peroxidase JBrowse link 6 49,020,918 49,089,855 RGD:1599649
RGD:1624291
RGD:1600115
thyroid hormone metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC118957.1 RGD:13792537
G Crym crystallin, mu JBrowse link 1 189,944,895 189,960,069 RGD:1624291
RGD:13792537
RGD:1600115
G Dio1 iodothyronine deiodinase 1 JBrowse link 5 126,894,837 126,911,532 RGD:13792537
G Dio2 iodothyronine deiodinase 2 JBrowse link 6 114,475,156 114,489,443 RGD:628323
RGD:13792537
RGD:1624291
RGD:1626436
G Dio3 iodothyronine deiodinase 3 JBrowse link 6 134,627,278 134,629,139 RGD:68236
RGD:13792537
G Duox2 dual oxidase 2 JBrowse link 3 114,218,187 114,237,808 RGD:1624291
RGD:1600115
G Gcnt4 glucosaminyl (N-acetyl) transferase 4 RGD:1624291
RGD:1600115
G Iyd iodotyrosine deiodinase JBrowse link 1 40,086,513 40,100,966 RGD:1624291
RGD:13792537
RGD:1600115
G Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 JBrowse link 11 35,011,007 35,262,362 RGD:1624291
G Reln reelin JBrowse link 4 9,347,533 9,774,257 RGD:1624291
G Slco4a1 solute carrier organic anion transporter family, member 4a1 JBrowse link 3 175,838,994 175,857,985 RGD:727314
G Sult1b1 sulfotransferase family 1B member 1 JBrowse link 14 22,142,412 22,155,246 RGD:1624291
G Tg thyroglobulin JBrowse link 7 107,467,260 107,652,897 RGD:1624291
G Ttr transthyretin JBrowse link 18 15,532,963 15,542,180 RGD:737655

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19575
    metabolic process 11899
      cellular metabolic process 10737
        cellular aromatic compound metabolic process 5503
          phenol-containing compound metabolic process 122
            (+)-lariciresinol metabolic process + 0
            (+)-larreatricin metabolic process 0
            (+)-pinoresinol metabolic process + 0
            (+)-secoisolariciresinol metabolic process + 0
            (-)-lariciresinol metabolic process + 0
            (-)-pinoresinol metabolic process + 0
            (-)-secoisolariciresinol metabolic process + 0
            (R)-4-hydroxymandelate metabolic process + 0
            1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one metabolic process + 0
            2-hydroxybenzoyl-CoA metabolic process + 0
            3-hydroxybenzyl alcohol metabolic process 0
            3-hydroxyphenylacetate metabolic process + 0
            4-hydroxyphenylacetate metabolic process + 0
            4-nitrophenol metabolic process + 2
            F-9775A metabolic process + 0
            F-9775B metabolic process + 0
            actinorhodin metabolic process + 0
            aerobic phenol-containing compound metabolic process + 0
            anaerobic phenol-containing compound metabolic process + 0
            asperthecin metabolic process + 0
            averantin metabolic process + 0
            bromoxynil metabolic process 0
            catechol-containing compound metabolic process + 59
            cresol metabolic process + 0
            curcumin metabolic process + 0
            diorcinol metabolic process + 0
            emericellin metabolic process + 0
            emodin metabolic process + 0
            endocrocin metabolic process + 0
            eugenol metabolic process + 0
            ferulate metabolic process + 0
            fonsecin metabolic process + 0
            funalenone metabolic process + 0
            gallate metabolic process + 0
            homogentisate metabolic process + 1
            melanin metabolic process + 21
            monodictyphenone metabolic process + 0
            neosartoricin metabolic process + 0
            novobiocin metabolic process + 0
            o-orsellinic acid metabolic process + 0
            octopamine metabolic process + 3
            orcinol metabolic process + 0
            pentachlorophenol metabolic process + 0
            phenol metabolic process + 0
            phenol-containing compound biosynthetic process + 48
            phenol-containing compound catabolic process + 10
            pyochelin metabolic process + 0
            resorcinol metabolic process 0
            salicylic acid metabolic process + 0
            serotonin metabolic process + 14
            shamixanthone metabolic process + 0
            sinapate ester metabolic process + 0
            sinapate metabolic process + 0
            thyroid hormone metabolic process + 32
            vanillin metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.