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ONTOLOGY REPORT - ANNOTATIONS


Term:siderophore biosynthetic process
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Accession:GO:0019290 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.
Comment:See also the biological process term 'nonribosomal peptide biosynthetic process ; GO:0019184'.
Synonyms:exact_synonym: siderophore anabolism;   siderophore biosynthesis;   siderophore formation;   siderophore synthesis
 narrow_synonym: siderochrome biosynthesis;   siderochrome biosynthetic process;   siderophore biosynthetic process, peptide formation;   siderophore biosynthetic process, peptide modification
 alt_id: GO:0031178;   GO:0031180


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siderophore biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdh2 3-hydroxybutyrate dehydrogenase 2 JBrowse link 2 240,461,505 240,482,149 RGD:1624291
RGD:1600115
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19576
    metabolic process 11899
      secondary metabolic process 76
        secondary metabolite biosynthetic process 25
          siderophore biosynthetic process 1
            achromobactin biosynthetic process 0
            chrysobactin biosynthetic process 0
            negative regulation of siderophore biosynthetic process + 0
            positive regulation of siderophore biosynthetic process + 0
            pyochelin biosynthetic process 0
            pyoverdine biosynthetic process 0
            regulation of siderophore biosynthetic process + 0
            siderophore biosynthetic process from catechol + 0
            siderophore biosynthetic process from hydroxamic acid + 0
Path 2
Term Annotations click to browse term
  biological_process 19576
    metabolic process 11899
      nitrogen compound metabolic process 10025
        cellular nitrogen compound metabolic process 6385
          cellular amide metabolic process 1403
            peptide metabolic process 1156
              peptide biosynthetic process 1004
                nonribosomal peptide biosynthetic process 14
                  siderophore biosynthetic process 1
                    achromobactin biosynthetic process 0
                    chrysobactin biosynthetic process 0
                    negative regulation of siderophore biosynthetic process + 0
                    positive regulation of siderophore biosynthetic process + 0
                    pyochelin biosynthetic process 0
                    pyoverdine biosynthetic process 0
                    regulation of siderophore biosynthetic process + 0
                    siderophore biosynthetic process from catechol + 0
                    siderophore biosynthetic process from hydroxamic acid + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.