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ONTOLOGY REPORT - ANNOTATIONS


Term:pentose metabolic process
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Accession:GO:0019321 term browser browse the term
Definition:The chemical reactions and pathways involving a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.
Synonyms:exact_synonym: pentose metabolism


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pentose metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fggy FGGY carbohydrate kinase domain containing JBrowse link 5 114,516,860 114,901,571 RGD:1624291
D-ribose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt5 nudix hydrolase 5 JBrowse link 17 76,387,027 76,410,309 RGD:1600115
RGD:1624291
G Rbks ribokinase JBrowse link 6 26,051,568 26,128,762 RGD:1600115
D-ribose metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpia ribose 5-phosphate isomerase A JBrowse link 4 98,568,028 98,593,664 RGD:13792537
D-xylose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhdh dihydrodiol dehydrogenase JBrowse link 1 101,465,937 101,476,867 RGD:1624291
RGD:13792537
D-xylose metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dcxr dicarbonyl and L-xylulose reductase JBrowse link 10 109,906,119 109,909,696 RGD:1600115
G Xylb xylulokinase JBrowse link 8 128,041,875 128,076,951 RGD:1600115
L-arabinose metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otog otogelin JBrowse link 1 102,258,124 102,327,201 RGD:1600115
G Otogl otogelin-like JBrowse link 7 51,768,469 51,935,442 RGD:1600115
pentose biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:1624291
G Pgd phosphogluconate dehydrogenase JBrowse link 5 165,966,128 165,982,327 RGD:1624291
pentose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpe ribulose-5-phosphate-3-epimerase JBrowse link 9 73,687,684 73,713,643 RGD:13792537
xylulose metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dcxr dicarbonyl and L-xylulose reductase JBrowse link 10 109,906,119 109,909,696 RGD:632676
RGD:13792537
RGD:1624291
G LOC688320 similar to Lung carbonyl reductase [NADPH] (NADPH-dependent carbonyl reductase) (LCR) (Adipocyte P27 protein) (AP27) JBrowse link 10 109,911,918 109,944,190 RGD:13792537
G LOC688321 similar to Lung carbonyl reductase [NADPH] (NADPH-dependent carbonyl reductase) (LCR) (Adipocyte P27 protein) (AP27) JBrowse link 10 109,949,168 109,953,268 RGD:13792537
G Xylb xylulokinase JBrowse link 8 128,041,875 128,076,951 RGD:1624291
RGD:1600115
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      small molecule metabolic process 1839
        monosaccharide metabolic process 290
          pentose metabolic process 14
            D-ribose metabolic process + 3
            D-xylose metabolic process + 3
            L-lyxose metabolic process 0
            arabinose metabolic process + 2
            pentose biosynthetic process + 2
            pentose catabolic process + 4
            xylulose metabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      primary metabolic process 10750
        carbohydrate metabolic process 630
          monosaccharide metabolic process 290
            pentose metabolic process 14
              D-ribose metabolic process + 3
              D-xylose metabolic process + 3
              L-lyxose metabolic process 0
              arabinose metabolic process + 2
              pentose biosynthetic process + 2
              pentose catabolic process + 4
              xylulose metabolic process + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.