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ONTOLOGY REPORT - ANNOTATIONS


Term:choline metabolic process
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Accession:GO:0019695 term browser browse the term
Definition:The chemical reactions and pathways involving choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.
Synonyms:exact_synonym: choline metabolism


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choline metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ache acetylcholinesterase JBrowse link 12 22,472,358 22,477,052 RGD:1580871
RGD:2301187
RGD:2301207
G Bche butyrylcholinesterase JBrowse link 2 171,104,476 171,196,186 RGD:2301187
RGD:2301195
G Chka choline kinase alpha JBrowse link 1 219,076,618 219,126,221 RGD:1626304
G Dmgdh dimethylglycine dehydrogenase JBrowse link 2 23,289,376 23,370,360 RGD:632576
G Enpp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 JBrowse link 16 48,315,500 48,437,258 RGD:1624291
RGD:13792537
RGD:1600115
choline catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmgdh dimethylglycine dehydrogenase JBrowse link 2 23,289,376 23,370,360 RGD:632576
RGD:1624291
RGD:1600115
G Sardh sarcosine dehydrogenase JBrowse link 3 5,737,203 5,802,153 RGD:634034
glycine betaine biosynthetic process from choline term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh7a1 aldehyde dehydrogenase 7 family, member A1 JBrowse link 18 51,619,007 51,651,267 RGD:1600115
G Chdh choline dehydrogenase JBrowse link 16 6,078,083 6,109,386 RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17967
    metabolic process 10722
      organic substance metabolic process 10177
        choline metabolic process 8
          choline biosynthetic process + 0
          choline catabolic process 2
          glycine betaine biosynthetic process from choline 2
Path 2
Term Annotations click to browse term
  biological_process 17967
    biological regulation 12663
      regulation of biological quality 4141
        regulation of neurotransmitter levels 408
          neurotransmitter metabolic process 158
            choline metabolic process 8
              choline biosynthetic process + 0
              choline catabolic process 2
              glycine betaine biosynthetic process from choline 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.