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ONTOLOGY REPORT - ANNOTATIONS


Term:antibacterial humoral response
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Accession:GO:0019731 term browser browse the term
Definition:An immune response against bacteria mediated through a body fluid. Examples of this process are the antibacterial humoral responses in Mus musculus and Drosophila melanogaster.
Synonyms:alt_id: GO:0006961;   GO:0019733


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antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030143.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:70,964,396...71,014,423 JBrowse link
G Adm adrenomedullin ISO (PMID:10225288) RGD PMID:10225288 NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259
JBrowse link
G Ang angiogenin ISO (PMID:12548285)
(MGI:MGI:2652649|PMID:12548285)
RGD PMID:12548285 MGI:MGI:2652649 NCBI chr15:28,022,926...28,028,636 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,103,688...28,121,494
Ensembl chr15:28,103,703...28,104,206
JBrowse link
G Anos1 anosmin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:70,999,780...71,000,627 JBrowse link
G App amyloid beta precursor protein IDA
ISO
PMID:20209079
(PMID:20209079)
RGD PMID:20209079, PMID:20209079 RGD:10400853 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G B2m beta-2 microglobulin ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Bpi bactericidal/permeability-increasing protein ISO (PMID:1937776) RGD PMID:1937776 NCBI chr 3:154,741,627...154,768,584
Ensembl chr 3:154,741,631...154,768,640
JBrowse link
G Bpifa1 BPI fold containing family A, member 1 ISO
IBA
ISS
(PMID:23499554)
PMID:21873635
GO_REF:0000024
(MGI:MGI:5484728|PMID:23499554)
RGD
UniProt
PMID:23499554, PMID:21873635 GO_REF:0000024, MGI:MGI:5484728, RGD:13792537 NCBI chr 3:149,624,867...149,630,610
Ensembl chr 3:149,624,712...149,630,613
JBrowse link
G Bpifa5 BPI fold containing family A, member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,643,481...149,649,398
Ensembl chr 3:149,643,481...149,649,398
JBrowse link
G Camp cathelicidin antimicrobial peptide ISO (PMID:12759353), (PMID:12860195), (PMID:14978112), (PMID:20209079), (PMID:7529412) RGD PMID:7529412, PMID:12759353, PMID:12860195, PMID:14978112, PMID:20209079 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Ctsg cathepsin G IEA
ISO
GO_REF:0000107
(PMID:1937776)
Ensembl
RGD
PMID:1937776 GO_REF:0000107 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678
JBrowse link
G Defa10 defensin alpha 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,498,236...75,499,012
Ensembl chr16:75,498,236...75,499,012
JBrowse link
G Defa11 defensin alpha 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,517,421...75,519,605
Ensembl chr16:75,517,505...75,518,336
JBrowse link
G Defa24 defensin alpha 24 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,345,086...75,346,122
Ensembl chr16:75,345,086...75,346,122
JBrowse link
G Defa5 defensin alpha 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,338,050...75,340,401
Ensembl chr16:75,338,052...75,340,360
JBrowse link
G Defa6 defensin alpha 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,400,781...75,401,655
Ensembl chr16:75,400,781...75,401,655
JBrowse link
G Defa8 defensin alpha 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,428,675...75,429,568
Ensembl chr16:75,428,675...75,429,568
JBrowse link
G Defa9 defensin alpha 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,465,710...75,466,604
Ensembl chr16:75,465,710...75,466,606
JBrowse link
G Defal1 defensin alpha-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,366,925...75,367,985
Ensembl chr16:75,366,929...75,367,906
JBrowse link
G Defb1 defensin beta 1 ISO (PMID:12860195) RGD PMID:12860195 NCBI chr16:75,294,385...75,309,127
Ensembl chr16:75,294,376...75,309,176
JBrowse link
G Fau FAU, ubiquitin like and ribosomal protein S30 fusion ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 1:221,420,312...221,421,827
Ensembl chr 1:221,420,271...221,421,842
JBrowse link
G H2bc12 H2B clustered histone 12 ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:44,527,421...44,527,801
Ensembl chr17:44,527,421...44,527,801
JBrowse link
G Hist1h2bd histone cluster 1 H2B family member D ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:44,833,924...44,834,305
Ensembl chr17:44,833,924...44,834,305
JBrowse link
G Hist1h2bl histone cluster 1 H2B family member l ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:44,748,445...44,748,910
Ensembl chr17:44,748,482...44,748,862
JBrowse link
G Hist1h2bq histone cluster 1 H2B family member Q ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:43,679,925...43,689,311
Ensembl chr17:43,679,925...43,689,311
JBrowse link
G Hist2h2be histone cluster 2 H2B family member E ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 2:198,360,837...198,363,399
Ensembl chr 2:198,360,998...198,361,378
JBrowse link
G Ighe immunoglobulin heavy constant epsilon IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 6:138,066,728...138,068,606 JBrowse link
G Ighg1 immunoglobulin heavy constant gamma 1 ISO (MGI:MGI:2664488|PMID:11911824), (MGI:MGI:3690573|PMID:9834074) RGD PMID:9834074, PMID:11911824 MGI:MGI:2664488, MGI:MGI:3690573 NCBI chr 6:139,140,572...139,784,388
Ensembl chr 6:139,140,679...139,142,218
JBrowse link
G Ighm immunoglobulin heavy constant mu IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 6:138,054,662...138,662,511 JBrowse link
G Jchain joining chain of multimeric IgA and IgM ISO (PMID:23250751) RGD PMID:23250751 NCBI chr14:21,176,841...21,183,731
Ensembl chr14:21,177,237...21,183,542
JBrowse link
G LOC100364500 RT1 class I, locus CE11-like ISO (PMID:25631937) RGD PMID:25631937 NCBI chr20:2,704,153...2,707,111
Ensembl chr20:2,704,148...2,707,120
JBrowse link
G LOC103690289 antileukoproteinase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,727,903...160,730,129
Ensembl chr 3:160,727,910...160,730,360
JBrowse link
G LOC103694852 ribonuclease K6-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr15:28,081,004...28,081,465 JBrowse link
G LOC103694893 antileukoproteinase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:160,736,675...160,739,137 JBrowse link
G Ltf lactotransferrin ISO
IBA
(PMID:1599934), (PMID:18714013)
PMID:21873635
RGD PMID:1599934, PMID:18714013, PMID:21873635 RGD:13792537 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Np4 defensin NP-4 precursor ISO
IBA
(PMID:2500436)
PMID:21873635
RGD PMID:2500436, PMID:21873635 RGD:13792537 NCBI chr16:75,478,548...75,481,146
Ensembl chr16:75,414,786...75,481,115
JBrowse link
G Npy neuropeptide Y ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:79,557,856...79,565,059
Ensembl chr 4:79,557,854...79,565,097
JBrowse link
G Pla2g1b phospholipase A2 group IB ISO (PMID:12860195) RGD PMID:12860195 NCBI chr12:46,879,346...46,890,234
Ensembl chr12:46,879,343...46,889,082
JBrowse link
G Pla2g6 phospholipase A2 group VI ISO (PMID:18714013) RGD PMID:18714013 NCBI chr 7:120,519,479...120,559,716
Ensembl chr 7:120,519,467...120,559,347
JBrowse link
G RatNP-3b defensin RatNP-3 precursor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,528,348...75,530,511
Ensembl chr16:75,497,832...75,530,517
JBrowse link
G RGD1310507 similar to RIKEN cDNA 1300017J02 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:111,742,987...111,762,747
Ensembl chr 8:111,727,984...111,777,677
JBrowse link
G RGD1563818 similar to secretory leukocyte protease inhibitor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Rnase3 ribonuclease A family member 3 ISO (PMID:12860195) RGD PMID:12860195 NCBI chr15:28,216,744...28,217,614
Ensembl chr15:28,216,744...28,217,614
JBrowse link
G Rnase6 ribonuclease A family member k6 ISO
IBA
(PMID:25075772)
PMID:21873635
(MGI:MGI:5902674|PMID:25075772)
RGD PMID:25075772, PMID:21873635 MGI:MGI:5902674, RGD:13792537 NCBI chr15:28,080,307...28,084,269
Ensembl chr15:28,081,004...28,081,465
JBrowse link
G Rpl39 ribosomal protein L39 ISO (PMID:12860195) RGD PMID:12860195 NCBI chr  X:123,705,241...123,707,257
Ensembl chr  X:123,705,235...123,708,211
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 ISO (PMID:25631937) RGD PMID:25631937 NCBI chr20:3,176,124...3,180,825
Ensembl chr20:3,176,107...3,179,818
JBrowse link
G Semg1 semenogelin 1 ISO (PMID:18714013) RGD PMID:18714013 NCBI chr 3:160,627,609...160,630,457
Ensembl chr 3:160,627,610...160,630,457
JBrowse link
G Slpi secretory leukocyte peptidase inhibitor ISO
IBA
(PMID:18714013)
PMID:21873635
(MGI:MGI:3777210|PMID:18322212)
RGD PMID:18322212, PMID:18714013, PMID:21873635 MGI:MGI:3777210, RGD:13792537 NCBI chr 3:160,799,979...160,802,228
Ensembl chr 3:160,799,981...160,802,433
JBrowse link
G Slpil2 antileukoproteinase-like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,736,677...160,738,923
Ensembl chr 3:160,736,675...160,739,137
JBrowse link
G Slpil3 antileukoproteinase-like 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,774,861...160,777,101
Ensembl chr 3:160,774,855...160,777,092
JBrowse link
G Tac1 tachykinin, precursor 1 ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tf transferrin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:111,694,570...111,721,275
Ensembl chr 8:111,673,547...111,721,333
JBrowse link
G Vip vasoactive intestinal peptide ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582
JBrowse link
G Wap whey acidic protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:86,897,948...86,900,417
Ensembl chr14:86,897,948...86,900,042
JBrowse link
G Wfdc10a WAP four-disulfide core domain 10A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,121,690...161,123,043
Ensembl chr 3:161,121,697...161,123,069
JBrowse link
G Wfdc11 WAP four-disulfide core domain 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,129,334...161,131,601
Ensembl chr 3:161,128,589...161,131,812
JBrowse link
G Wfdc12 WAP four-disulfide core domain 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,581,449...160,581,798
Ensembl chr 3:160,581,449...160,581,798
JBrowse link
G Wfdc13 WAP four-disulfide core domain 13 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,149,935...161,151,916
Ensembl chr 3:161,149,935...161,151,505
JBrowse link
G Wfdc15a WAP four-disulfide core domain 15A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,591,512...160,591,891
Ensembl chr 3:160,591,512...160,591,891
JBrowse link
G Wfdc15b WAP four-disulfide core domain 15B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,607,059...160,617,212
Ensembl chr 3:160,607,056...160,608,308
JBrowse link
G Wfdc16 WAP four-disulfide core domain 16 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,098,405...161,101,983
Ensembl chr 3:161,098,548...161,101,628
JBrowse link
G Wfdc18 WAP four-disulfide core domain 18 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:71,008,709...71,010,863
Ensembl chr10:71,008,709...71,010,863
JBrowse link
G Wfdc2 WAP four-disulfide core domain 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,018,497...161,045,469
Ensembl chr 3:161,018,511...161,024,209
JBrowse link
G Wfdc21 WAP four-disulfide core domain 21 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:71,047,326...71,053,195
Ensembl chr10:71,047,310...71,053,191
JBrowse link
G Wfdc3 WAP four-disulfide core domain 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,193,904...161,212,063
Ensembl chr 3:161,193,769...161,212,188
JBrowse link
G Wfdc5 WAP four-disulfide core domain 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,567,805...160,573,978
Ensembl chr 3:160,567,805...160,573,978
JBrowse link
G Wfdc9 WAP four-disulfide core domain 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,112,024...161,115,324
Ensembl chr 3:161,113,063...161,115,313
JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 ISO (MGI:MGI:4838964|PMID:20056603) RGD PMID:20056603 MGI:MGI:4838964 NCBI chr 8:5,893,253...5,900,965
Ensembl chr 8:5,893,249...5,901,049
JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 ISO (MGI:MGI:3698376|PMID:11248802) RGD PMID:11248802 MGI:MGI:3698376 NCBI chr 8:5,893,253...5,900,965
Ensembl chr 8:5,893,249...5,901,049
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed ISO (PMID:20421939) RGD PMID:20421939 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232
JBrowse link
induction of bacterial agglutination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmbt1 deleted in malignant brain tumors 1 ISO (PMID:11007786), (PMID:19189310) RGD PMID:11007786, PMID:19189310 NCBI chr 1:201,620,642...201,689,905
NCBI chr 1:203,149,414...203,228,705
JBrowse link
G Fga fibrinogen alpha chain ISO
IEA
(PMID:24367264)
GO_REF:0000107
RGD
Ensembl
PMID:24367264 GO_REF:0000107 NCBI chr 2:181,997,562...182,013,726
Ensembl chr 2:182,006,242...182,013,763
JBrowse link
G Fgb fibrinogen beta chain ISO (PMID:24367264) RGD PMID:24367264 NCBI chr 2:182,028,044...182,035,026
Ensembl chr 2:182,027,115...182,038,178
JBrowse link
G Rnase2 ribonuclease A family member 2 NOT ISO (PMID:23992292) RGD PMID:23992292 NCBI chr15:28,154,482...28,155,291
Ensembl chr15:28,154,482...28,155,291
JBrowse link
G Rnase3 ribonuclease A family member 3 ISO (PMID:23992292) RGD PMID:23992292 NCBI chr15:28,216,744...28,217,614
Ensembl chr15:28,216,744...28,217,614
JBrowse link
G Sftpd surfactant protein D IEA
ISO
GO_REF:0000107
(PMID:28228557)
Ensembl
RGD
PMID:28228557 GO_REF:0000107 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
G Spon2 spondin 2 ISO (MGI:MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:MGI:2686801 NCBI chr14:82,815,158...82,824,529
Ensembl chr14:82,818,663...82,824,599
JBrowse link
negative regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spink5 serine peptidase inhibitor, Kazal type 5 ISO (MGI:MGI:3770082|PMID:17012259) RGD PMID:17012259 MGI:MGI:3770082 NCBI chr18:35,118,300...35,190,458
Ensembl chr18:35,121,967...35,191,069
Ensembl chr 1:35,121,967...35,191,069
JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO (MGI:MGI:3775881|PMID:18167348) RGD PMID:18167348 MGI:MGI:3775881 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
positive regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klk5 kallikrein related-peptidase 5 ISO
IBA
(PMID:17012259)
PMID:21873635
RGD PMID:17012259, PMID:21873635 RGD:13792537 NCBI chr 1:99,781,291...99,793,745
Ensembl chr 1:99,781,237...99,786,330
JBrowse link
G Klk7 kallikrein-related peptidase 7 ISO
IEA
(PMID:17012259)
GO_REF:0000107
RGD
Ensembl
PMID:17012259 GO_REF:0000107 NCBI chr 1:99,749,991...99,754,723
Ensembl chr 1:99,749,936...99,754,435
JBrowse link
G Pgc progastricsin ISO (PMID:12759353) RGD PMID:12759353 NCBI chr 9:15,266,699...15,274,917
Ensembl chr 9:15,266,699...15,274,917
JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO MGI:MGI:3529594 (MGI:MGI:3528786|PMID:15692051) RGD PMID:15692051 MGI:MGI:3528786 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    interspecies interaction between organisms 1919
      response to other organism 1708
        antimicrobial humoral response 154
          antibacterial humoral response 81
            antibacterial peptide production + 7
            induction of bacterial agglutination 7
            male-specific antibacterial humoral response 0
Path 2
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to external stimulus 3204
        response to external biotic stimulus 1712
          response to other organism 1708
            response to bacterium 1043
              defense response to bacterium 429
                antibacterial humoral response 81
                  antibacterial peptide production + 7
                  induction of bacterial agglutination 7
                  male-specific antibacterial humoral response 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.