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ONTOLOGY REPORT - ANNOTATIONS


Term:peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
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Accession:GO:0019800 term browser browse the term
Definition:The formation of a cross-link between peptide chains mediated by a chondroitin 4-sulfate glycosaminoglycan that originates from a typical O-glycosidic link to serine of one chain; the other chain is esterified, via the alpha-carbon of its C-terminal Asp, to C-6 of an internal N-acetylgalactosamine of the glycosaminoglycan chain.
Synonyms:exact_synonym: peptide cross-linking via chondroitin 4-sulphate glycosaminoglycan
 xref: RESID:AA0219


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peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bgn biglycan JBrowse link X 157,319,042 157,331,204 RGD:1624291
G Dcn decorin JBrowse link 7 38,742,250 38,782,282 RGD:1624291
G Egflam EGF-like, fibronectin type III and laminin G domains JBrowse link 2 56,503,002 56,681,334 RGD:1624291
RGD:1600115
G Mamdc2 MAM domain containing 2 JBrowse link 1 241,071,110 241,223,798 RGD:1624291
G Ndnf neuron-derived neurotrophic factor JBrowse link 4 96,528,830 96,565,780 RGD:1624291
G Prss34 protease, serine, 34 JBrowse link 10 14,656,812 14,658,569 RGD:1600115
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 JBrowse link 20 29,654,926 29,679,927 RGD:1624291
G Spock3 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3 JBrowse link 16 28,372,067 28,716,762 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      cellular metabolic process 10567
        sulfur compound metabolic process 293
          chondroitin sulfate metabolic process 24
            peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan 8
Path 2
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      organic substance metabolic process 10949
        macromolecule metabolic process 9418
          protein metabolic process 5973
            glycoprotein metabolic process 354
              proteoglycan metabolic process 73
                chondroitin sulfate proteoglycan metabolic process 31
                  chondroitin sulfate metabolic process 24
                    peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan 8
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.