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ONTOLOGY REPORT - ANNOTATIONS


Term:5-methylcytosine metabolic process
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Accession:GO:0019857 term browser browse the term
Definition:The chemical reactions and pathways involving 5-methylcytosine, a methylated base of DNA.
Synonyms:exact_synonym: 5-methylcytosine metabolism


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5-methylcytosine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET2 tet methylcytosine dioxygenase 2 ISO (MGI:MGI:5298314|PMID:21803851) MGI PMID:21803851 MGI:MGI:5298314 NCBI chr 4:97,612,439...97,745,544
Ensembl chr 4:108,269,082...108,358,400
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5-methylcytosine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET2 tet methylcytosine dioxygenase 2 ISO (PMID:24315485) UniProtKB PMID:24315485 NCBI chr 4:97,612,439...97,745,544
Ensembl chr 4:108,269,082...108,358,400
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12524
    metabolic process 7962
      cellular metabolic process 7310
        cellular aromatic compound metabolic process 3867
          5-methylcytosine metabolic process 1
            5-methylcytosine biosynthetic process 0
            5-methylcytosine catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 12524
    cellular process 11624
      cellular metabolic process 7310
        cellular nitrogen compound metabolic process 4215
          pyrimidine-containing compound metabolic process 42
            5-methylcytosine metabolic process 1
              5-methylcytosine biosynthetic process 0
              5-methylcytosine catabolic process 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.