Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:symbiont-containing vacuole
go back to main search page
Accession:GO:0020003 term browser browse the term
Definition:Membrane-bounded vacuole within a host cell in which a symbiont organism resides. The vacuole membrane is derived from both the host and symbiont.
Comment:Note that this term does not have a relationship to 'vacuole ; GO:0005773' because it does not fit the definition of a vacuole; the parasitophorous vacuole was so named because it resembles a vacuole in the microscope.
Synonyms:exact_synonym: SCV;   parasitophorous vacuole
 narrow_synonym: Salmonella-containing vacuole;   bacterium-containing vacuole;   pathogen-occupied vacuole


show annotations for term's descendants       view all columns           Sort by:
 
symbiont-containing vacuole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 JBrowse link 4 85,551,503 85,563,683 RGD:1624291
G Rab29 RAB29, member RAS oncogene family JBrowse link 13 48,644,575 48,650,229 RGD:1624291
symbiont-containing vacuole membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 JBrowse link 4 85,551,503 85,563,683 RGD:1624291
G Gbp1 guanylate binding protein 1 JBrowse link 2 248,343,334 248,423,402 RGD:1624291
G Gbp2 guanylate binding protein 2 JBrowse link 2 248,276,795 248,293,784 RGD:1624291
RGD:13792537
RGD:1600115
G Gbp4 guanylate binding protein 4 JBrowse link 2 248,249,232 248,263,104 RGD:13792537
RGD:1624291
G Gbp6 guanylate binding protein family member 6 JBrowse link 14 5,927,568 5,954,923 RGD:13792537
G LOC103690086 uncharacterized LOC103690086 JBrowse link 14 5,642,357 5,646,406 RGD:1624291
G LOC685067 similar to guanylate binding protein family, member 6 JBrowse link 2 248,215,324 248,241,278 RGD:13792537
G Pf4 platelet factor 4 JBrowse link 14 18,848,549 18,849,258 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20119
    cellular anatomical entity 19775
      extracellular region 2475
        extracellular organelle 122
          extracellular membrane-bounded organelle 11
            symbiont-containing vacuole 9
              symbiont-containing vacuolar space 0
              symbiont-containing vacuole membrane + 8
Path 2
Term Annotations click to browse term
  cellular_component 20119
    cellular anatomical entity 19775
      host cellular component 159
        host cell 159
          host cell part 158
            host intracellular region 156
              host intracellular part 156
                host cell cytoplasm 13
                  host cell cytoplasm part 13
                    symbiont-containing vacuole 9
                      symbiont-containing vacuolar space 0
                      symbiont-containing vacuole membrane + 8
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.