Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:dorsal spinal cord development
go back to main search page
Accession:GO:0021516 term browser browse the term
Definition:The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input.


show annotations for term's descendants           Sort by:
 
dorsal spinal cord development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daam2 dishevelled associated activator of morphogenesis 2 ISO (MGI:MGI:6114828|PMID:22227309) RGD PMID:22227309 MGI:MGI:6114828 NCBI chr 9:13,444,883...13,493,154
Ensembl chr 9:13,446,896...13,490,669
JBrowse link
G Draxin dorsal inhibitory axon guidance protein ISO
IBA
(MGI:MGI:3832346|PMID:19150847)
PMID:21873635
RGD PMID:19150847, PMID:21873635 MGI:MGI:3832346, RGD:13792537 NCBI chr 5:164,913,085...164,943,012
Ensembl chr 5:164,913,906...164,927,869
JBrowse link
G Drgx dorsal root ganglia homeobox ISO
IEA
MGI:MGI:2182636 (MGI:MGI:3694508|PMID:16978876)
GO_REF:0000107
RGD
Ensembl
PMID:16978876 GO_REF:0000107, MGI:MGI:3694508 NCBI chr16:8,823,872...8,853,430
Ensembl chr16:8,823,872...8,853,430
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO
IEA
(MGI:MGI:5440338|PMID:22998873)
GO_REF:0000107
RGD
Ensembl
PMID:22998873 GO_REF:0000107, MGI:MGI:5440338 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Hoxb8 homeo box B8 IEA
ISO
GO_REF:0000107
MGI:MGI:1934178 (MGI:MGI:1349283|PMID:10559485), (MGI:MGI:3789512|PMID:18430798)
Ensembl
RGD
PMID:10559485, PMID:18430798 GO_REF:0000107, MGI:MGI:1349283, MGI:MGI:3789512 NCBI chr10:84,131,484...84,133,874
Ensembl chr10:84,131,495...84,133,246
JBrowse link
G Pbx3 PBX homeobox 3 ISO MGI:MGI:3773271|MGI:MGI:3773272 (MGI:MGI:3772548|PMID:18155191) RGD PMID:18155191 MGI:MGI:3772548 NCBI chr 3:13,241,031...13,436,084
Ensembl chr 3:13,182,024...13,525,983
JBrowse link
G Rfx4 regulatory factor X4 ISO (MGI:MGI:2669568|PMID:12925582) RGD PMID:12925582 MGI:MGI:2669568 NCBI chr 7:25,831,358...25,909,976
Ensembl chr 7:25,808,419...25,907,849
JBrowse link
G Uncx UNC homeobox IEA
ISO
GO_REF:0000107
MGI:MGI:1859373|MGI:MGI:1928812 (MGI:MGI:1855901|PMID:10804169), (MGI:MGI:1855902|PMID:10804168)
Ensembl
RGD
PMID:10804168, PMID:10804169 GO_REF:0000107, MGI:MGI:1855901, MGI:MGI:1855902 NCBI chr12:17,182,158...17,186,679
Ensembl chr12:17,182,163...17,186,679
JBrowse link
regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbx1 ladybird homeobox 1 ISO MGI:MGI:2182635 (MGI:MGI:2179903|PMID:12062038) RGD PMID:12062038 MGI:MGI:2179903 NCBI chr 1:264,973,315...264,975,132
Ensembl chr 1:264,973,315...264,975,132
JBrowse link
spinal cord association neuron differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO MGI:MGI:1857470 (MGI:MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:MGI:3639800 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Gdf7 growth differentiation factor 7 ISO MGI:MGI:2386906 (MGI:MGI:1353705|PMID:10693795) RGD PMID:10693795 MGI:MGI:1353705 NCBI chr 6:33,496,596...33,507,626
Ensembl chr 6:33,503,217...33,507,542
JBrowse link
G Gsx1 GS homeobox 1 ISO MGI:MGI:95843 (MGI:MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:MGI:3639800 NCBI chr12:9,605,873...9,607,168
Ensembl chr12:9,605,873...9,607,168
JBrowse link
G Gsx2 GS homeobox 2 ISO MGI:MGI:95842 (MGI:MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:MGI:3639800 NCBI chr14:35,650,985...35,652,709
Ensembl chr14:35,650,985...35,652,709
JBrowse link
G Lhx1 LIM homeobox 1 ISO
ISS
UniProtKB:P61375 (MGI:MGI:3695495|PMID:17166926)
GO_REF:0000024
RGD
UniProt
PMID:17166926 GO_REF:0000024, MGI:MGI:3695495 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Lhx3 LIM homeobox 3 ISO (MGI:MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:MGI:3840011 NCBI chr 3:3,653,861...3,662,509
Ensembl chr 3:3,654,755...3,661,810
JBrowse link
G Lhx5 LIM homeobox 5 ISO UniProtKB:P63006 (MGI:MGI:3695495|PMID:17166926) RGD PMID:17166926 MGI:MGI:3695495 NCBI chr12:41,663,000...41,671,437
Ensembl chr12:41,663,000...41,671,437
JBrowse link
G Lmo4 LIM domain only 4 ISO MGI:MGI:98480 (MGI:MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:MGI:3840011 NCBI chr 2:250,218,635...250,235,435
Ensembl chr 2:250,218,641...250,241,673
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 IEP PMID:15019943 HGNC PMID:15019943 RGD:8554528 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Pax3 paired box 3 ISO MGI:MGI:97491 (MGI:MGI:1321412|PMID:9858722) RGD PMID:9858722 MGI:MGI:1321412 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
G Pax7 paired box 7 ISO MGI:MGI:97487 (MGI:MGI:1321412|PMID:9858722) RGD PMID:9858722 MGI:MGI:1321412 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO MGI:MGI:109360 (MGI:MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:MGI:3840011 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
G Wnt1 Wnt family member 1 ISO MGI:MGI:98956 (MGI:MGI:2176385|PMID:11877374) RGD PMID:11877374 MGI:MGI:2176385 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:MGI:98953 (MGI:MGI:2176385|PMID:11877374) RGD PMID:11877374 MGI:MGI:2176385 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        dorsal spinal cord development 23
          regulation of cell proliferation in dorsal spinal cord + 0
          spinal cord association neuron differentiation + 15
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            nervous system development 2716
              central nervous system development 1257
                spinal cord development 144
                  dorsal spinal cord development 23
                    regulation of cell proliferation in dorsal spinal cord + 0
                    spinal cord association neuron differentiation + 15
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.