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ONTOLOGY REPORT - ANNOTATIONS


Term:cell migration in hindbrain
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Accession:GO:0021535 term browser browse the term
Definition:The orderly movement of a cell that will reside in the hindbrain.


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cell migration in hindbrain term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou4f1 POU class 4 homeobox 1 ISO
IEA
MGI:MGI:3512302 (MGI:MGI:84546|PMID:8955272)
GO_REF:0000107
RGD
Ensembl
PMID:8955272 GO_REF:0000107, MGI:MGI:84546 NCBI chr15:88,618,255...88,622,712
Ensembl chr15:88,620,470...88,622,413
JBrowse link
G Sema4c semaphorin 4C ISO (MGI:MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:MGI:4881530 NCBI chr 9:43,129,413...43,140,442
Ensembl chr 9:43,129,415...43,139,870
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 ISO MGI:MGI:3793763|MGI:MGI:3793765 (MGI:MGI:3793563|PMID:18327254) RGD PMID:18327254 MGI:MGI:3793563 NCBI chr13:113,373,569...113,570,774
Ensembl chr13:113,373,578...113,571,648
JBrowse link
G Ttbk2 tau tubulin kinase 2 ISO (MGI:MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:MGI:5700621 NCBI chr 3:112,677,932...112,789,615
Ensembl chr 3:112,684,152...112,789,289
JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor like GTPase 13B ISO (MGI:MGI:5528615|PMID:23817546) RGD PMID:23817546 MGI:MGI:5528615 NCBI chr 7:1,122,567...1,188,209
Ensembl chr 7:1,122,567...1,188,209
JBrowse link
G Flna filamin A IMP RGD PMID:22076441 RGD:11564351 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Itgb1 integrin subunit beta 1 ISO
IEA
MGI:MGI:2156945|MGI:MGI:2684610 (MGI:MGI:4946895|PMID:21185282)
GO_REF:0000107
RGD
Ensembl
PMID:21185282 GO_REF:0000107, MGI:MGI:4946895 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO
IEA
MGI:MGI:1298218 (MGI:MGI:2686791|PMID:14715945)
GO_REF:0000107
RGD
Ensembl
PMID:14715945 GO_REF:0000107, MGI:MGI:2686791 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:96770 (MGI:MGI:2686791|PMID:14715945) RGD PMID:14715945 MGI:MGI:2686791 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b ISO MGI:MGI:4418265 (MGI:MGI:4849589|PMID:21068058) RGD PMID:21068058 MGI:MGI:4849589 NCBI chr14:42,711,169...42,718,707
Ensembl chr14:42,714,315...42,717,010
JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 IEA
ISO
GO_REF:0000107
(MGI:MGI:6368077|PMID:2438288)
Ensembl
RGD
PMID:2438288 GO_REF:0000107, MGI:MGI:6368077 NCBI chr10:56,205,622...56,211,879
Ensembl chr10:56,205,625...56,211,891
JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 ISO
IBA
MGI:MGI:4831137 (MGI:MGI:4830814|PMID:20153830)
PMID:21873635
RGD PMID:20153830, PMID:21873635 MGI:MGI:4830814, RGD:13792537 NCBI chr 1:214,407,072...214,410,069
Ensembl chr 1:214,408,100...214,408,549
JBrowse link
G LOC100911402 cell cycle exit and neuronal differentiation protein 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,970,163...213,973,224
Ensembl chr 1:213,970,174...213,973,163
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:MGI:1351063|PMID:10624947) RGD PMID:10624947 MGI:MGI:1351063 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna2 catenin alpha 2 ISO (MGI:MGI:2181860|PMID:12089526), (MGI:MGI:3621696|PMID:12123610) RGD PMID:12089526, PMID:12123610 MGI:MGI:2181860, MGI:MGI:3621696 NCBI chr 4:107,880,611...109,042,724
Ensembl chr 4:107,881,826...108,008,484
JBrowse link
G Cul5 cullin 5 ISO (MGI:MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:MGI:5545793 NCBI chr 8:58,199,992...58,255,149
Ensembl chr 8:58,202,821...58,253,688
JBrowse link
G Dab1 DAB adaptor protein 1 ISO MGI:MGI:1337096|MGI:MGI:1861918 (MGI:MGI:1098179|PMID:9338785), (MGI:MGI:5545793|PMID:24210661) RGD PMID:9338785, PMID:24210661 MGI:MGI:1098179, MGI:MGI:5545793 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 ISO MGI:MGI:4838182 (MGI:MGI:5312167|PMID:22357600) RGD PMID:22357600 MGI:MGI:5312167 NCBI chr 7:118,157,093...118,396,733
Ensembl chr 7:118,156,946...118,396,728
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats ISO MGI:MGI:3577419 (MGI:MGI:5582020|PMID:24466353) RGD PMID:24466353 MGI:MGI:5582020 NCBI chr 5:167,330,966...167,664,506
Ensembl chr 5:167,331,035...167,664,505
JBrowse link
G Rnf7 ring finger protein 7 ISO MGI:MGI:108554 (MGI:MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:MGI:5545793 NCBI chr 8:104,326,719...104,336,098
Ensembl chr 8:104,326,719...104,335,729
JBrowse link
G Socs7 suppressor of cytokine signaling 7 ISO (MGI:MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:MGI:5545793 NCBI chr10:85,301,797...85,337,971
Ensembl chr10:85,301,875...85,330,397
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    locomotion 1938
      cell motility 1745
        cell migration 1571
          cell migration in hindbrain 21
            deep nuclear neuron cell migration + 0
            hindbrain radial glia guided cell migration + 16
            hindbrain tangential cell migration + 3
            inward migration of deep nuclear neurons 0
            motor neuron precursor migration involved in dorsal motor nucleus of vagus nerve formation 0
            outward migration of deep nuclear neurons 0
            rhombomere cell migration 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            nervous system development 2716
              central nervous system development 1257
                brain development 963
                  hindbrain development 217
                    cell migration in hindbrain 21
                      deep nuclear neuron cell migration + 0
                      hindbrain radial glia guided cell migration + 16
                      hindbrain tangential cell migration + 3
                      inward migration of deep nuclear neurons 0
                      motor neuron precursor migration involved in dorsal motor nucleus of vagus nerve formation 0
                      outward migration of deep nuclear neurons 0
                      rhombomere cell migration 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.