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ONTOLOGY REPORT - ANNOTATIONS


Term:dentate gyrus development
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Accession:GO:0021542 term browser browse the term
Definition:The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus.


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dentate gyrus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 ISO MGI:MGI:4453011 (MGI:MGI:5516166|PMID:23720746) RGD PMID:23720746 MGI:MGI:5516166 NCBI chr20:3,351,269...3,364,565
Ensembl chr20:3,351,303...3,364,565
JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO MGI:MGI:3525505 (MGI:MGI:4418391|PMID:20020054) RGD PMID:20020054 MGI:MGI:4418391 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
JBrowse link
G Drd1 dopamine receptor D1 ISO
IEA
MGI:MGI:2181426|MGI:MGI:3707260 (MGI:MGI:3703826|PMID:17360497)
GO_REF:0000107
RGD
Ensembl
PMID:17360497 GO_REF:0000107, MGI:MGI:3703826 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Emx2 empty spiracles homeobox 2 ISO MGI:MGI:2148858 (MGI:MGI:2153372|PMID:10729342) RGD PMID:10729342 MGI:MGI:2153372 NCBI chr 1:280,633,938...280,640,946
Ensembl chr 1:280,633,938...280,640,946
JBrowse link
G Fezf2 Fez family zinc finger 2 ISO MGI:MGI:3046867 (MGI:MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:MGI:3702790 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
JBrowse link
G Kif3a kinesin family member 3a ISO MGI:MGI:2179048|MGI:MGI:2386464 (MGI:MGI:3794243|PMID:18297065) RGD PMID:18297065 MGI:MGI:3794243 NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO
IEA
MGI:MGI:1933764 (MGI:MGI:1351293|PMID:10631168)
GO_REF:0000107
RGD
Ensembl
PMID:10631168 GO_REF:0000107, MGI:MGI:1351293 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha ISO MGI:MGI:1888413 (MGI:MGI:49987|PMID:1638738) RGD PMID:1638738 MGI:MGI:49987 NCBI chr13:85,916,753...86,061,534
Ensembl chr13:85,918,252...86,061,176
JBrowse link
G Mdk midkine ISO (PMID:10096022) RGD PMID:10096022 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mef2c myocyte enhancer factor 2C IEP RGD PMID:18949272 RGD:5131610 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Neurod1 neuronal differentiation 1 ISS
ISO
GO_REF:0000024
MGI:MGI:106593 (MGI:MGI:1352314|PMID:10639171), (MGI:MGI:1858353|PMID:10804213), (MGI:MGI:2159022|PMID:10398678)
UniProt
RGD
PMID:10398678, PMID:10639171, PMID:10804213 GO_REF:0000024, MGI:MGI:1352314, MGI:MGI:1858353, MGI:MGI:2159022 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurod6 neuronal differentiation 6 ISO MGI:MGI:1339708 (MGI:MGI:1858353|PMID:10804213) RGD PMID:10804213 MGI:MGI:1858353 NCBI chr 4:85,911,861...85,915,107
Ensembl chr 4:85,911,861...85,915,099
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 ISO MGI:MGI:2151350|MGI:MGI:2181426 (MGI:MGI:3527227|PMID:12527005), (MGI:MGI:3763461|PMID:17953618) RGD PMID:12527005, PMID:17953618 MGI:MGI:3527227, MGI:MGI:3763461 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:MGI:4849596 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:MGI:3759727|PMID:17706614) RGD PMID:17706614 MGI:MGI:3759727 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Reln reelin IMP RGD PMID:15459104 RGD:2317799 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Sct secretin ISO MGI:MGI:3815315 (MGI:MGI:4939559|PMID:21159798) RGD PMID:21159798 MGI:MGI:4939559 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
G Smo smoothened, frizzled class receptor ISO
IEA
MGI:MGI:2176256|MGI:MGI:2179048 (MGI:MGI:3794243|PMID:18297065)
GO_REF:0000107
RGD
Ensembl
PMID:18297065 GO_REF:0000107, MGI:MGI:3794243 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Tmem108 transmembrane protein 108 ISO
IEA
(MGI:MGI:5825380|PMID:28096412)
GO_REF:0000107
RGD
Ensembl
PMID:28096412 GO_REF:0000107, MGI:MGI:5825380 NCBI chr 8:111,968,568...112,265,623
Ensembl chr 8:111,970,288...111,984,572
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    developmental process 6813
      anatomical structure development 6256
        dentate gyrus development 19
Path 2
Term Annotations click to browse term
  biological_process 20017
    developmental process 6813
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            nervous system development 2716
              central nervous system development 1257
                brain development 963
                  forebrain development 507
                    telencephalon development 338
                      pallium development 233
                        hippocampus development 121
                          dentate gyrus development 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.