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ONTOLOGY REPORT - ANNOTATIONS


Term:striatum development
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Accession:GO:0021756 term browser browse the term
Definition:The progression of the striatum over time from its initial formation until its mature state. The striatum is a region of the forebrain consisting of the caudate nucleus, putamen and fundus striati.
Synonyms:exact_synonym: neostriatum development;   striate nucleus development


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striatum development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bbs1 Bardet-Biedl syndrome 1 JBrowse link 1 220,146,084 220,165,545 RGD:1624291
G Bbs2 Bardet-Biedl syndrome 2 JBrowse link 19 11,385,921 11,421,523 RGD:1624291
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
G Cntnap2 contactin associated protein 2 JBrowse link 4 74,700,539 77,025,463 RGD:1624291
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:1624291
RGD:1600115
RGD:7248608
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:7248608
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 JBrowse link 1 21,748,201 21,813,205 RGD:13204724
G Foxp1 forkhead box P1 JBrowse link 4 131,362,178 131,963,466 RGD:11536004
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1624291
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:13462055
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:12790706
G Mkks McKusick-Kaufman syndrome JBrowse link 3 129,866,542 129,885,213 RGD:1624291
G Ogdh oxoglutarate dehydrogenase JBrowse link 14 86,414,924 86,481,903 RGD:1624291
G Rarb retinoic acid receptor, beta JBrowse link 15 9,915,223 10,262,599 RGD:1624291
G Secisbp2 SECIS binding protein 2 JBrowse link 17 13,555,348 13,586,595 RGD:1624291
RGD:1600115
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
G Slitrk5 SLIT and NTRK-like family, member 5 JBrowse link 15 96,817,907 96,826,760 RGD:1624291
caudate nucleus development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxp2 forkhead box P2 JBrowse link 4 41,364,441 41,944,685 RGD:1624291
nucleus accumbens development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 JBrowse link 1 127,302,920 127,337,828 RGD:1624291
RGD:1600115
putamen development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxp2 forkhead box P2 JBrowse link 4 41,364,441 41,944,685 RGD:1624291
striatal medium spiny neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl11b BAF chromatin remodeling complex subunit BCL11B JBrowse link 6 131,834,097 131,927,251 RGD:1624291
G Inhba inhibin subunit beta A JBrowse link 17 51,894,869 51,919,998 RGD:1624291
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:1624291
RGD:1600115
G Zswim6 zinc finger, SWIM-type containing 6 JBrowse link 2 38,978,042 39,042,886 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    developmental process 6734
      anatomical structure development 6180
        striatum development 24
          caudate nucleus development 1
          nucleus accumbens development 1
          putamen development 1
          striatal medium spiny neuron differentiation 4
Path 2
Term Annotations click to browse term
  biological_process 19858
    developmental process 6734
      anatomical structure development 6180
        multicellular organism development 5638
          system development 5213
            nervous system development 2702
              central nervous system development 1251
                brain development 963
                  forebrain development 509
                    telencephalon development 342
                      subpallium development 30
                        striatum development 24
                          caudate nucleus development 1
                          nucleus accumbens development 1
                          putamen development 1
                          striatal medium spiny neuron differentiation 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.