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ONTOLOGY REPORT - ANNOTATIONS


Term:olfactory bulb development
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Accession:GO:0021772 term browser browse the term
Definition:The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex.


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olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chrNW_004955419:799,415...807,138
Ensembl chrNW_004955419:799,410...811,029
JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chrNW_004955434:8,998,357...9,010,468
Ensembl chrNW_004955434:9,000,158...9,011,250
JBrowse link
G Arx aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725) MGI PMID:15677725 MGI:MGI:3574008 NCBI chrNW_004955509:5,326,145...5,338,250 JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO (MGI:MGI:3843558|PMID:19279158) MGI PMID:19279158 MGI:MGI:3843558 NCBI chrNW_004955444:17,859,999...18,067,623
Ensembl chrNW_004955444:17,858,771...18,067,248
JBrowse link
G Crtac1 cartilage acidic protein 1 ISO (MGI:MGI:5086019|PMID:21817055) MGI PMID:21817055 MGI:MGI:5086019 NCBI chrNW_004955507:3,916,803...4,062,118
Ensembl chrNW_004955507:3,916,625...4,062,118
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO (MGI:MGI:5430247|PMID:22542597) ParkinsonsUK-UCL PMID:22542597 MGI:MGI:5430247 NCBI chrNW_004955415:4,434,486...4,462,505
Ensembl chrNW_004955415:4,434,453...4,461,751
JBrowse link
G Dlx2 distal-less homeobox 2 ISO (MGI:MGI:76977|PMID:7590232) MGI PMID:7590232 MGI:MGI:76977 NCBI chrNW_004955449:2,907,502...2,909,893
Ensembl chrNW_004955449:2,907,436...2,910,816
JBrowse link
G Dpysl2 dihydropyrimidinase like 2 ISO RGD PMID:14751288 RGD:2316247 NCBI chrNW_004955403:49,188,259...49,306,916
Ensembl chrNW_004955403:49,188,205...49,307,810
JBrowse link
G Efna2 ephrin A2 ISO RGD PMID:12234653 RGD:634733 NCBI chrNW_004955495:6,614,828...6,627,287
Ensembl chrNW_004955495:6,614,791...6,627,287
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359
JBrowse link
G Eomes eomesodermin ISO (MGI:MGI:3846465|PMID:19435790) MGI PMID:19435790 MGI:MGI:3846465 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:2679928|PMID:14605369) MGI PMID:14605369 MGI:MGI:2679928 NCBI chrNW_004955417:23,798,044...24,067,759
Ensembl chrNW_004955417:23,798,393...24,067,100
JBrowse link
G Fezf1 FEZ family zinc finger 1 ISO (MGI:MGI:3702790|PMID:16971467) MGI PMID:16971467 MGI:MGI:3702790 NCBI chrNW_004955479:3,945,358...3,953,924
Ensembl chrNW_004955479:3,945,292...3,951,847
JBrowse link
G Fut1 fucosyltransferase 1 (H blood group) ISO (MGI:MGI:3701717|PMID:16884711) UniProt PMID:16884711 MGI:MGI:3701717 NCBI chrNW_004955559:1,822,412...1,824,184
Ensembl chrNW_004955559:1,823,049...1,823,965
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3829299|PMID:19109490) MGI PMID:19109490 MGI:MGI:3829299 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Kif14 kinesin family member 14 ISO (MGI:MGI:5485315|PMID:23308235), (MGI:MGI:5605219|PMID:24931760) UniProtKB PMID:23308235, PMID:24931760 MGI:MGI:5485315, MGI:MGI:5605219 NCBI chrNW_004955406:36,732,135...36,791,756
Ensembl chrNW_004955406:36,737,484...36,791,756
JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:MGI:4397621|PMID:19820705) MGI PMID:19820705 MGI:MGI:4397621 NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875
JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:21168496) BHF-UCL PMID:21168496 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923
JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:MGI:2151063|PMID:11997145)
(MGI:MGI:3527227|PMID:12527005)
MGI PMID:11997145, PMID:12527005 MGI:MGI:2151063, MGI:MGI:3527227 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Pax6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pcnt pericentrin ISO (MGI:MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:MGI:4438783 NCBI chrNW_004955407:42,735,078...42,835,851
Ensembl chrNW_004955407:42,735,188...42,835,465
JBrowse link
G Rpgrip1l RPGRIP1 like ISO (MGI:MGI:3716248|PMID:17558409) MGI PMID:17558409 MGI:MGI:3716248 NCBI chrNW_004955433:11,321,504...11,423,981
Ensembl chrNW_004955433:11,322,590...11,424,569
JBrowse link
G Sall1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) MGI PMID:18024993 MGI:MGI:4420747 NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171
JBrowse link
G Sema3a semaphorin 3A ISO (PMID:22416012) UniProtKB PMID:22416012 NCBI chrNW_004955410:2,146,088...2,344,342
Ensembl chrNW_004955410:2,144,388...2,338,973
JBrowse link
G Ski SKI proto-oncogene ISO (MGI:MGI:2176418|PMID:11731796) MGI PMID:11731796 MGI:MGI:2176418 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Slit1 slit guidance ligand 1 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chrNW_004955507:3,204,135...3,365,319
Ensembl chrNW_004955507:3,201,556...3,365,471
JBrowse link
G Slit2 slit guidance ligand 2 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (MGI:MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:MGI:5014119 NCBI chrNW_004955438:11,410,196...11,466,044
Ensembl chrNW_004955438:11,409,982...11,466,523
JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chrNW_004955507:3,204,135...3,365,319
Ensembl chrNW_004955507:3,201,556...3,365,471
JBrowse link
G Slit2 slit guidance ligand 2 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
G Slit3 slit guidance ligand 3 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chrNW_004955408:21,719,487...22,322,958
Ensembl chrNW_004955408:21,722,632...22,322,917
JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 ISO (PMID:15207848) UniProtKB PMID:15207848 NCBI chrNW_004955407:12,593,911...13,485,723
Ensembl chrNW_004955407:13,107,235...13,487,053
JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:15207848) UniProtKB PMID:15207848 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725) MGI PMID:15677725 MGI:MGI:3574008 NCBI chrNW_004955509:5,326,145...5,338,250 JBrowse link
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:MGI:3709518 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351
JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111
JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 ISO (MGI:MGI:5461281|PMID:23090999) MGI PMID:23090999 MGI:MGI:5461281 NCBI chrNW_004955559:1,008,208...1,013,023
Ensembl chrNW_004955559:1,008,208...1,013,023
JBrowse link
G Robo1 roundabout guidance receptor 1 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chrNW_004955407:12,593,911...13,485,723
Ensembl chrNW_004955407:13,107,235...13,487,053
JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chrNW_004955407:14,301,689...15,549,561
Ensembl chrNW_004955407:14,305,498...14,842,790
JBrowse link
G Sall3 spalt like transcription factor 3 ISO (MGI:MGI:3798379|PMID:18260139) MGI PMID:18260139 MGI:MGI:3798379 NCBI chrNW_004955402:62,157,988...62,163,977
Ensembl chrNW_004955402:62,157,970...62,163,057
JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:5285122|PMID:21539518) UniProtKB PMID:21539518 MGI:MGI:5285122 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 ISO (MGI:MGI:5461281|PMID:23090999) MGI PMID:23090999 MGI:MGI:5461281 NCBI chrNW_004955559:1,008,208...1,013,023
Ensembl chrNW_004955559:1,008,208...1,013,023
JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO (MGI:MGI:3778596|PMID:18184563) MGI PMID:18184563 MGI:MGI:3778596 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797
JBrowse link
G Dlx5 distal-less homeobox 5 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chrNW_004955432:13,429,832...13,434,160
Ensembl chrNW_004955432:13,429,415...13,434,258
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO (MGI:MGI:3527369|PMID:15543145) UniProtKB PMID:15543145 MGI:MGI:3527369 NCBI chrNW_004955457:3,177,905...4,236,152
Ensembl chrNW_004955457:3,177,991...4,228,558
JBrowse link
G Gsx2 GS homeobox 2 ISO (MGI:MGI:1926244|PMID:11060228) MGI PMID:11060228 MGI:MGI:1926244 NCBI chrNW_004955447:16,714,870...16,715,757 JBrowse link
G Sall1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) UniProtKB PMID:18024993 MGI:MGI:4420747 NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171
JBrowse link
G Uncx UNC homeobox ISO (MGI:MGI:4949589|PMID:20692344) MGI PMID:20692344 MGI:MGI:4949589 NCBI chrNW_004955460:8,941,629...8,945,761 JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogdh oxoglutarate dehydrogenase ISO (PMID:16901643) UniProtKB PMID:16901643 NCBI chrNW_004955456:7,416,343...7,484,889
Ensembl chrNW_004955456:7,415,589...7,485,515
JBrowse link
G Pax6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Sall1 spalt like transcription factor 1 ISO (PMID:18024993) UniProtKB PMID:18024993 NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171
JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:21168496) BHF-UCL PMID:21168496 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923
JBrowse link
G Ogdh oxoglutarate dehydrogenase ISO (PMID:16901643) UniProtKB PMID:16901643 NCBI chrNW_004955456:7,416,343...7,484,889
Ensembl chrNW_004955456:7,415,589...7,485,515
JBrowse link
G Slit1 slit guidance ligand 1 ISO (MGI:MGI:3042495|PMID:14960623) MGI PMID:14960623 MGI:MGI:3042495 NCBI chrNW_004955507:3,204,135...3,365,319
Ensembl chrNW_004955507:3,201,556...3,365,471
JBrowse link
G Srf serum response factor ISO (MGI:MGI:3578447|PMID:15837932) MGI PMID:15837932 MGI:MGI:3578447 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11889
    developmental process 5616
      anatomical structure development 5254
        olfactory bulb development 44
          olfactory bulb interneuron differentiation + 17
          olfactory bulb mitral cell layer development 3
          olfactory bulb tufted cell development 0
          tangential migration from the subventricular zone to the olfactory bulb + 10
Path 2
Term Annotations click to browse term
  biological_process 11889
    developmental process 5616
      anatomical structure development 5254
        multicellular organism development 4812
          system development 4532
            nervous system development 2349
              central nervous system development 1137
                brain development 899
                  forebrain development 487
                    telencephalon development 325
                      olfactory lobe development 47
                        olfactory bulb development 44
                          olfactory bulb interneuron differentiation + 17
                          olfactory bulb mitral cell layer development 3
                          olfactory bulb tufted cell development 0
                          tangential migration from the subventricular zone to the olfactory bulb + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.