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ONTOLOGY REPORT - ANNOTATIONS


Term:olfactory bulb development
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Accession:GO:0021772 term browser browse the term
Definition:The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex.


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olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312
JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132
JBrowse link
G ARX aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725) MGI PMID:15677725 MGI:MGI:3574008 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 IEA Ensembl GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627
JBrowse link
G CRTAC1 cartilage acidic protein 1 IEA Ensembl GO_REF:0000107 NCBI chr28:11,078,085...11,227,026
Ensembl chr28:11,078,173...11,227,014
JBrowse link
G CSF1R colony stimulating factor 1 receptor IEA Ensembl GO_REF:0000107 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510
JBrowse link
G DIP2A disco interacting protein 2 homolog A ISO (MGI:MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:MGI:4438783 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484
JBrowse link
G DLX2 distal-less homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510
JBrowse link
G DPYSL2 dihydropyrimidinase like 2 ISO RGD PMID:14751288 RGD:2316247 NCBI chr25:30,900,347...31,038,256
Ensembl chr25:30,903,253...31,038,144
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718
JBrowse link
G EOMES eomesodermin IEA Ensembl GO_REF:0000107 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527
JBrowse link
G EXT1 exostosin glycosyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G FUT1 fucosyltransferase 1 (H blood group) ISO (MGI:MGI:3701717|PMID:16884711) UniProt PMID:16884711 MGI:MGI:3701717 NCBI chr 1:107,575,011...107,577,427
Ensembl chr 1:107,575,782...107,576,879
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:MGI:3829299|PMID:19109490) MGI PMID:19109490 MGI:MGI:3829299 NCBI chr10:54,954,852...54,957,116 JBrowse link
G KIF14 kinesin family member 14 IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581
JBrowse link
G LHX2 LIM homeobox 2 ISO (MGI:MGI:4397621|PMID:19820705) MGI PMID:19820705 MGI:MGI:4397621 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883
JBrowse link
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:10,282,452...10,283,479 JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO (PMID:21168496) BHF-UCL PMID:21168496 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998
JBrowse link
G RPGRIP1L RPGRIP1 like IEA Ensembl GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) MGI PMID:18024993 MGI:MGI:4420747 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G SEMA3A semaphorin 3A IEA Ensembl GO_REF:0000107 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098
JBrowse link
G SKI SKI proto-oncogene ISO (MGI:MGI:2176418|PMID:11731796) MGI PMID:11731796 MGI:MGI:2176418 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403
JBrowse link
G SLIT1 slit guidance ligand 1 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313
JBrowse link
G SLIT2 slit guidance ligand 2 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 IEA Ensembl GO_REF:0000107 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075
JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT1 slit guidance ligand 1 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313
JBrowse link
G SLIT2 slit guidance ligand 2 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
G SLIT3 slit guidance ligand 3 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 4:42,506,680...43,099,053
Ensembl chr 4:42,508,426...43,094,714
JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO1 roundabout guidance receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728
JBrowse link
G SLIT2 slit guidance ligand 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox IEA Ensembl GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206
JBrowse link
G RAC1 Rac family small GTPase 1 ISO (MGI:MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:MGI:3709518 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216
JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261
JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 ISO (MGI:MGI:5461281|PMID:23090999) MGI PMID:23090999 MGI:MGI:5461281 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502
JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728
JBrowse link
G ROBO2 roundabout guidance receptor 2 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392
JBrowse link
G SALL3 spalt like transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:1,413,991...1,421,516
Ensembl chr 1:1,416,390...1,435,326
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 ISO (MGI:MGI:5461281|PMID:23090999) MGI PMID:23090999 MGI:MGI:5461281 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO (MGI:MGI:3778596|PMID:18184563) MGI PMID:18184563 MGI:MGI:3778596 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G DLX5 distal-less homeobox 5 IEA Ensembl GO_REF:0000107 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr37:19,029,647...20,134,576
Ensembl chr37:19,037,217...20,134,426
JBrowse link
G GSX2 GS homeobox 2 ISO (MGI:MGI:1926244|PMID:11060228) MGI PMID:11060228 MGI:MGI:1926244 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546
JBrowse link
G MIR200A microRNA mir-200a ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 5:56,369,063...56,369,152
Ensembl chr 5:56,369,061...56,369,151
JBrowse link
G MIR200B microRNA mir-200b ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 5:56,368,400...56,368,479
Ensembl chr 5:56,368,400...56,368,479
JBrowse link
G MIR200C microRNA mir-200c ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr27:38,082,097...38,082,159
Ensembl chr27:38,082,091...38,082,169
JBrowse link
G MIR9-2 microRNA mir-9-2 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 3:19,997,697...19,997,756
Ensembl chr 3:19,997,682...19,997,768
JBrowse link
G MIR9-3 microRNA mir-9-3 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 3:52,410,840...52,410,900
Ensembl chr 3:52,410,825...52,410,914
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) UniProtKB PMID:18024993 MGI:MGI:4420747 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G UNCX UNC homeobox IEA Ensembl GO_REF:0000107 NCBI chr 6:15,652,600...15,657,016
Ensembl chr 6:15,653,576...15,657,927
JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OGDH oxoglutarate dehydrogenase ISO (PMID:16901643) UniProtKB PMID:16901643
G SALL1 spalt like transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRK2 leucine rich repeat kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G OGDH oxoglutarate dehydrogenase ISO (PMID:16901643) UniProtKB PMID:16901643
G SLIT1 slit guidance ligand 1 IEA Ensembl GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313
JBrowse link
G SRF serum response factor IEA Ensembl GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16187
    developmental process 6309
      anatomical structure development 5857
        olfactory bulb development 47
          olfactory bulb interneuron differentiation + 22
          olfactory bulb mitral cell layer development 2
          olfactory bulb tufted cell development 0
          tangential migration from the subventricular zone to the olfactory bulb + 10
Path 2
Term Annotations click to browse term
  biological_process 16187
    developmental process 6309
      anatomical structure development 5857
        multicellular organism development 5350
          system development 4984
            nervous system development 2588
              central nervous system development 1214
                brain development 935
                  forebrain development 499
                    telencephalon development 330
                      olfactory lobe development 50
                        olfactory bulb development 47
                          olfactory bulb interneuron differentiation + 22
                          olfactory bulb mitral cell layer development 2
                          olfactory bulb tufted cell development 0
                          tangential migration from the subventricular zone to the olfactory bulb + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.