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ONTOLOGY REPORT - ANNOTATIONS


Term:olfactory bulb development
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Accession:GO:0021772 term browser browse the term
Definition:The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex.


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olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding protein 1 IEA
ISS
Ensembl
UniProtKB
GO_REF:0000024, GO_REF:0000107 NCBI chr 9:85,546,539...85,742,029
Ensembl chr 9:85,546,539...85,742,029
JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:127,866,480...127,885,542
Ensembl chr 9:127,866,486...127,877,675
JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:4,709,556...4,742,043
Ensembl chr 9:4,709,556...4,742,043
JBrowse link
G ARX aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725) MGI PMID:15677725 MGI:MGI:3574008 NCBI chr  X:25,003,694...25,015,965
Ensembl chr  X:25,003,694...25,016,420
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 IEA Ensembl GO_REF:0000107 NCBI chr 8:60,678,740...60,868,028
Ensembl chr 8:60,678,740...60,868,028
JBrowse link
G CRTAC1 cartilage acidic protein 1 IEA Ensembl GO_REF:0000107 NCBI chr10:97,854,711...98,030,621
Ensembl chr10:97,865,000...98,030,828
JBrowse link
G CSF1R colony stimulating factor 1 receptor IEA Ensembl GO_REF:0000107 NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
JBrowse link
G DLX2 distal-less homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:172,099,438...172,102,900
Ensembl chr 2:172,099,438...172,102,900
JBrowse link
G DPYSL2 dihydropyrimidinase like 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:26,514,031...26,658,175
Ensembl chr 8:26,514,031...26,658,178
JBrowse link
G EFNA2 ephrin A2 IEA Ensembl GO_REF:0000107 NCBI chr19:1,282,817...1,301,431
Ensembl chr19:1,285,873...1,301,431
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 6:131,808,020...131,895,155
Ensembl chr 6:131,808,016...131,895,155
JBrowse link
G EOMES eomesodermin IEA Ensembl GO_REF:0000107 NCBI chr 3:27,715,953...27,722,713
Ensembl chr 3:27,715,949...27,722,711
JBrowse link
G EXT1 exostosin glycosyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,853
Ensembl chr 8:117,794,490...118,111,853
JBrowse link
G FEZF1 FEZ family zinc finger 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:122,300,939...122,311,855
Ensembl chr 7:122,301,303...122,310,691
JBrowse link
G FUT1 fucosyltransferase 1 (H blood group) ISS UniProt GO_REF:0000024 NCBI chr19:48,748,011...48,755,358
Ensembl chr19:48,748,011...48,755,390
JBrowse link
G ID2 inhibitor of DNA binding 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G KIF14 kinesin family member 14 ISS UniProtKB GO_REF:0000024 NCBI chr 1:200,551,497...200,620,791
Ensembl chr 1:200,551,497...200,620,751
JBrowse link
G LHX2 LIM homeobox 2 ISO (MGI:MGI:4397621|PMID:19820705) MGI PMID:19820705 MGI:MGI:4397621 NCBI chr 9:124,011,759...124,033,301
Ensembl chr 9:124,001,670...124,033,301
JBrowse link
G LRRK2 leucine rich repeat kinase 2 IMP (PMID:21168496) BHF-UCL PMID:21168496 NCBI chr12:40,224,890...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:108,166,022...108,188,809
Ensembl chr 6:108,166,058...108,188,809
Ensembl chr 6:108,166,058...108,188,809
JBrowse link
G PAX6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PCNT pericentrin ISO (MGI:MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:MGI:4438783 NCBI chr21:46,324,122...46,445,769
Ensembl chr21:46,324,141...46,445,769
JBrowse link
G RPGRIP1L RPGRIP1 like IEA Ensembl GO_REF:0000107 NCBI chr16:53,598,153...53,703,859
Ensembl chr16:53,598,153...53,703,938
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) MGI PMID:18024993 MGI:MGI:4420747 NCBI chr16:51,135,982...51,151,270
Ensembl chr16:51,135,975...51,151,367
JBrowse link
G SEMA3A semaphorin 3A IMP (PMID:22416012) UniProtKB PMID:22416012 NCBI chr 7:83,955,777...84,515,189
Ensembl chr 7:83,955,777...84,492,724
JBrowse link
G SKI SKI proto-oncogene ISS BHF-UCL GO_REF:0000024 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,228,319...2,310,213
JBrowse link
G SLIT1 slit guidance ligand 1 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chr10:96,998,038...97,185,959
Ensembl chr10:96,998,038...97,185,959
JBrowse link
G SLIT2 slit guidance ligand 2 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 IEA Ensembl GO_REF:0000107 NCBI chr14:88,824,153...88,881,079
Ensembl chr14:88,824,153...88,881,078
JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT1 slit guidance ligand 1 NOT IDA (PMID:11748139) UniProtKB PMID:11748139 NCBI chr10:96,998,038...97,185,959
Ensembl chr10:96,998,038...97,185,959
JBrowse link
G SLIT2 slit guidance ligand 2 NOT IDA (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
G SLIT3 slit guidance ligand 3 NOT IDA (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 5:168,661,740...169,301,139
Ensembl chr 5:168,661,733...169,301,129
Ensembl chr 5:168,661,733...169,301,129
JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO1 roundabout guidance receptor 1 IDA (PMID:15207848) UniProtKB PMID:15207848 NCBI chr 3:78,597,239...79,767,998
Ensembl chr 3:78,597,239...79,767,998
JBrowse link
G SLIT2 slit guidance ligand 2 IDA (PMID:15207848) UniProtKB PMID:15207848 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox IEA Ensembl GO_REF:0000107 NCBI chr  X:25,003,694...25,015,965
Ensembl chr  X:25,003,694...25,016,420
JBrowse link
G RAC1 Rac family small GTPase 1 ISO (MGI:MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:MGI:3709518 NCBI chr 7:6,374,527...6,403,967
Ensembl chr 7:6,374,527...6,403,967
JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 IEA Ensembl GO_REF:0000107 NCBI chr19:49,928,702...49,933,936
Ensembl chr19:49,928,702...49,933,935
JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chr 3:78,597,239...79,767,998
Ensembl chr 3:78,597,239...79,767,998
JBrowse link
G ROBO2 roundabout guidance receptor 2 ISS UniProtKB GO_REF:0000024 NCBI chr 3:75,906,675...77,649,964
Ensembl chr 3:75,906,695...77,649,964
JBrowse link
G SALL3 spalt like transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr18:78,980,275...78,998,969
Ensembl chr18:78,980,275...79,002,677
JBrowse link
G WNT5A Wnt family member 5A ISS UniProtKB GO_REF:0000024 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 ISO (MGI:MGI:5461281|PMID:23090999) MGI PMID:23090999 MGI:MGI:5461281 NCBI chr19:49,928,702...49,933,936
Ensembl chr19:49,928,702...49,933,935
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO (MGI:MGI:3778596|PMID:18184563) MGI PMID:18184563 MGI:MGI:3778596 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G DLX5 distal-less homeobox 5 IEA Ensembl GO_REF:0000107 NCBI chr 7:97,020,396...97,024,831
Ensembl chr 7:97,020,396...97,024,950
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 ISS UniProtKB GO_REF:0000024 NCBI chr 2:211,375,717...212,538,802
Ensembl chr 2:211,375,717...212,538,841
JBrowse link
G GSX2 GS homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:54,100,163...54,102,498
Ensembl chr 4:54,099,523...54,102,498
JBrowse link
G MIR200A microRNA 200a ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 1:1,167,863...1,167,952
Ensembl chr 1:1,167,863...1,167,952
JBrowse link
G MIR200B microRNA 200b ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 1:1,167,104...1,167,198
Ensembl chr 1:1,167,104...1,167,198
JBrowse link
G MIR200C microRNA 200c ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr12:6,963,699...6,963,766
Ensembl chr12:6,963,699...6,963,766
JBrowse link
G MIR376A1 microRNA 376a-1 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr14:101,040,782...101,040,849
Ensembl chr14:101,040,782...101,040,849
JBrowse link
G MIR9-1 microRNA 9-1 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 1:156,420,341...156,420,429
Ensembl chr 1:156,420,341...156,420,429
JBrowse link
G MIR9-2 microRNA 9-2 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 5:88,666,853...88,666,939
Ensembl chr 5:88,666,853...88,666,939
JBrowse link
G MIR9-3 microRNA 9-3 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr15:89,368,017...89,368,106
Ensembl chr15:89,368,017...89,368,106
JBrowse link
G SALL1 spalt like transcription factor 1 ISS UniProtKB GO_REF:0000024 NCBI chr16:51,135,982...51,151,270
Ensembl chr16:51,135,975...51,151,367
JBrowse link
G UNCX UNC homeobox IEA Ensembl GO_REF:0000107 NCBI chr 7:1,232,872...1,237,326
Ensembl chr 7:1,232,872...1,237,326
JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OGDH oxoglutarate dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr 7:44,606,572...44,709,066
Ensembl chr 7:44,606,572...44,709,066
JBrowse link
G PAX6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G SALL1 spalt like transcription factor 1 IMP (PMID:18024993) UniProtKB PMID:18024993 NCBI chr16:51,135,982...51,151,270
Ensembl chr16:51,135,975...51,151,367
JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRK2 leucine rich repeat kinase 2 IMP (PMID:21168496) BHF-UCL PMID:21168496 NCBI chr12:40,224,890...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G OGDH oxoglutarate dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr 7:44,606,572...44,709,066
Ensembl chr 7:44,606,572...44,709,066
JBrowse link
G SLIT1 slit guidance ligand 1 ISO (MGI:MGI:3042495|PMID:14960623) MGI PMID:14960623 MGI:MGI:3042495 NCBI chr10:96,998,038...97,185,959
Ensembl chr10:96,998,038...97,185,959
JBrowse link
G SRF serum response factor IEA Ensembl GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18670
    developmental process 7464
      anatomical structure development 6871
        olfactory bulb development 52
          olfactory bulb interneuron differentiation + 24
          olfactory bulb mitral cell layer development 3
          olfactory bulb tufted cell development 0
          tangential migration from the subventricular zone to the olfactory bulb + 10
Path 2
Term Annotations click to browse term
  biological_process 18670
    developmental process 7464
      anatomical structure development 6871
        multicellular organism development 6344
          system development 5748
            nervous system development 2887
              central nervous system development 1321
                brain development 1001
                  forebrain development 515
                    telencephalon development 345
                      olfactory lobe development 55
                        olfactory bulb development 52
                          olfactory bulb interneuron differentiation + 24
                          olfactory bulb mitral cell layer development 3
                          olfactory bulb tufted cell development 0
                          tangential migration from the subventricular zone to the olfactory bulb + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.