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ONTOLOGY REPORT - ANNOTATIONS


Term:olfactory bulb development
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Accession:GO:0021772 term browser browse the term
Definition:The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex.


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olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr10:29,440,150...29,590,457
Ensembl chr10:29,440,145...29,590,454
JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 1:268,355,032...268,365,659
Ensembl chr 1:268,355,032...268,365,598
JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chr 1:217,236,561...217,263,144
Ensembl chr 1:217,236,482...217,261,370
JBrowse link
G ARX aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725) MGI PMID:15677725 MGI:MGI:3574008 NCBI chr  X:21,067,631...21,079,850
Ensembl chr  X:21,067,613...21,079,524
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 IEA Ensembl GO_REF:0000107 NCBI chr 4:72,572,455...72,754,443
Ensembl chr 4:72,571,874...72,754,432
JBrowse link
G CRTAC1 cartilage acidic protein 1 IEA Ensembl GO_REF:0000107 NCBI chr14:109,237,182...109,390,832
Ensembl chr14:109,219,683...109,390,692
JBrowse link
G CSF1R colony stimulating factor 1 receptor IEA Ensembl GO_REF:0000107 NCBI chr 2:151,102,138...151,130,311
Ensembl chr 2:151,102,138...151,147,634
JBrowse link
G DLX2 distal-less homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr15:78,200,696...78,204,264
Ensembl chr15:78,201,892...78,204,157
JBrowse link
G DPYSL2 dihydropyrimidinase like 2 ISO RGD PMID:14751288 RGD:2316247 NCBI chr14:10,428,598...10,545,705
Ensembl chr14:10,427,500...10,545,703
JBrowse link
G EFNA2 ephrin A2 ISO RGD PMID:12234653 RGD:634733 NCBI chr 2:77,165,187...77,179,936
Ensembl chr 2:77,165,189...77,179,058
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595
JBrowse link
G EOMES eomesodermin IEA Ensembl GO_REF:0000107 NCBI chr13:14,209,590...14,216,184
Ensembl chr13:14,210,083...14,215,797
JBrowse link
G EXT1 exostosin glycosyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,809...20,935,564
JBrowse link
G FEZF1 FEZ family zinc finger 1 IEA Ensembl GO_REF:0000107 NCBI chr18:24,881,850...24,884,790
Ensembl chr18:24,879,030...24,884,920
JBrowse link
G FUT1 fucosyltransferase 1 (H blood group) ISO (MGI:MGI:3701717|PMID:16884711) UniProt PMID:16884711 MGI:MGI:3701717 NCBI chr 6:54,077,431...54,080,475
Ensembl chr 6:54,077,431...54,080,514
JBrowse link
G ID2 inhibitor of DNA binding 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G KIF14 kinesin family member 14 IEA Ensembl GO_REF:0000107 NCBI chr10:23,123,379...23,177,919
Ensembl chr10:23,125,239...23,174,273
JBrowse link
G LHX2 LIM homeobox 2 ISO (MGI:MGI:4397621|PMID:19820705) MGI PMID:19820705 MGI:MGI:4397621 NCBI chr 1:264,900,931...264,920,888
Ensembl chr 1:264,900,591...264,920,913
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO (PMID:21168496) BHF-UCL PMID:21168496 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,240...71,944,938
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,789,110
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681
JBrowse link
G PAX6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,971,567...29,001,200
JBrowse link
G PCNT pericentrin ISO (MGI:MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:MGI:4438783
G RPGRIP1L RPGRIP1 like IEA Ensembl GO_REF:0000107 NCBI chr 6:31,564,937...31,660,540
Ensembl chr 6:31,564,986...31,661,194
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) MGI PMID:18024993 MGI:MGI:4420747 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
G SEMA3A semaphorin 3A IEA Ensembl GO_REF:0000107 NCBI chr 9:95,934,937...96,387,950
Ensembl chr 9:96,065,922...96,387,950
JBrowse link
G SKI SKI proto-oncogene ISO (MGI:MGI:2176418|PMID:11731796) MGI PMID:11731796 MGI:MGI:2176418 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,029...64,241,556
JBrowse link
G SLIT1 slit guidance ligand 1 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chr14:108,446,003...108,624,508
Ensembl chr14:108,446,003...108,624,305
JBrowse link
G SLIT2 slit guidance ligand 2 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,756,619...15,149,510
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 IEA Ensembl GO_REF:0000107 NCBI chr 7:110,731,729...110,783,999
Ensembl chr 7:110,731,668...110,784,855
JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT1 slit guidance ligand 1 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr14:108,446,003...108,624,508
Ensembl chr14:108,446,003...108,624,305
JBrowse link
G SLIT2 slit guidance ligand 2 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,756,619...15,149,510
JBrowse link
G SLIT3 slit guidance ligand 3 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr16:54,551,536...55,221,427
Ensembl chr16:54,553,933...55,220,310
JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO1 roundabout guidance receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr13:175,348,223...176,479,482
Ensembl chr13:175,505,366...176,479,482
JBrowse link
G SLIT2 slit guidance ligand 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,756,619...15,149,510
JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox IEA Ensembl GO_REF:0000107 NCBI chr  X:21,067,631...21,079,850
Ensembl chr  X:21,067,613...21,079,524
JBrowse link
G RAC1 Rac family small GTPase 1 ISO (MGI:MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:MGI:3709518 NCBI chr 3:4,781,776...4,803,510
Ensembl chr 3:4,781,771...4,803,687
JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,746
JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 IEA Ensembl GO_REF:0000107 NCBI chr 6:54,945,067...54,950,142
Ensembl chr 6:54,945,119...54,950,137
JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chr13:175,348,223...176,479,482
Ensembl chr13:175,505,366...176,479,482
JBrowse link
G ROBO2 roundabout guidance receptor 2 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chr13:177,365,712...179,040,027
Ensembl chr13:177,365,717...179,013,542
JBrowse link
G SALL3 spalt like transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:146,251,591...146,273,778
Ensembl chr 1:146,252,154...146,274,620
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 ISO (MGI:MGI:5461281|PMID:23090999) MGI PMID:23090999 MGI:MGI:5461281 NCBI chr 6:54,945,067...54,950,142
Ensembl chr 6:54,945,119...54,950,137
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO (MGI:MGI:3778596|PMID:18184563) MGI PMID:18184563 MGI:MGI:3778596 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G DLX5 distal-less homeobox 5 IEA Ensembl GO_REF:0000107 NCBI chr 9:76,639,915...76,643,689
Ensembl chr 9:76,639,561...76,643,884
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr15:113,966,573...115,096,984
Ensembl chr15:113,973,037...114,696,375
JBrowse link
G GSX2 GS homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:40,880,093...40,883,928
Ensembl chr 8:40,881,751...40,883,371
JBrowse link
G MIR9-1 microRNA mir-9-1 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 4:93,660,422...93,660,510 JBrowse link
G MIR9-2 microRNA mir-9-2 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 2:96,076,352...96,076,438 JBrowse link
G MIR9-3 microRNA mir-9-3 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chr 7:54,948,452...54,948,532
Ensembl chr 7:54,948,447...54,948,536
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) UniProtKB PMID:18024993 MGI:MGI:4420747 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
G UNCX UNC homeobox IEA Ensembl GO_REF:0000107 NCBI chr 3:804,188...808,574
Ensembl chr 3:804,177...809,770
JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OGDH oxoglutarate dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964
JBrowse link
G PAX6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,971,567...29,001,200
JBrowse link
G SALL1 spalt like transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRK2 leucine rich repeat kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,240...71,944,938
JBrowse link
G OGDH oxoglutarate dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964
JBrowse link
G SLIT1 slit guidance ligand 1 IEA Ensembl GO_REF:0000107 NCBI chr14:108,446,003...108,624,508
Ensembl chr14:108,446,003...108,624,305
JBrowse link
G SRF serum response factor IEA Ensembl GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,063...38,222,140
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16545
    developmental process 6302
      anatomical structure development 5842
        olfactory bulb development 48
          olfactory bulb interneuron differentiation + 20
          olfactory bulb mitral cell layer development 3
          olfactory bulb tufted cell development 0
          tangential migration from the subventricular zone to the olfactory bulb + 10
Path 2
Term Annotations click to browse term
  biological_process 16545
    developmental process 6302
      anatomical structure development 5842
        multicellular organism development 5340
          system development 4963
            nervous system development 2594
              central nervous system development 1219
                brain development 943
                  forebrain development 501
                    telencephalon development 333
                      olfactory lobe development 51
                        olfactory bulb development 48
                          olfactory bulb interneuron differentiation + 20
                          olfactory bulb mitral cell layer development 3
                          olfactory bulb tufted cell development 0
                          tangential migration from the subventricular zone to the olfactory bulb + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.