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ONTOLOGY REPORT - ANNOTATIONS


Term:olfactory bulb development
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Accession:GO:0021772 term browser browse the term
Definition:The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex.


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olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Arx aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725) MGI PMID:15677725 MGI:MGI:3574008 NCBI chrNW_004936836:295,090...306,756 JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO (MGI:MGI:3843558|PMID:19279158) MGI PMID:19279158 MGI:MGI:3843558 NCBI chrNW_004936496:12,381,225...12,505,121 JBrowse link
G Crtac1 cartilage acidic protein 1 ISO (MGI:MGI:5086019|PMID:21817055) MGI PMID:21817055 MGI:MGI:5086019 NCBI chrNW_004936636:1,748,883...1,883,958 JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO (MGI:MGI:5430247|PMID:22542597) ParkinsonsUK-UCL PMID:22542597 MGI:MGI:5430247 NCBI chrNW_004936504:4,898,947...4,927,195 JBrowse link
G Dlx2 distal-less homeobox 2 ISO (MGI:MGI:76977|PMID:7590232) MGI PMID:7590232 MGI:MGI:76977 NCBI chrNW_004936509:2,262,873...2,265,391 JBrowse link
G Dpysl2 dihydropyrimidinase like 2 ISO RGD PMID:14751288 RGD:2316247 NCBI chrNW_004936757:311,317...422,870 JBrowse link
G Efna2 ephrin A2 ISO RGD PMID:12234653 RGD:634733 NCBI chrNW_004936588:648,336...657,768 JBrowse link
G Eomes eomesodermin ISO (MGI:MGI:3846465|PMID:19435790) MGI PMID:19435790 MGI:MGI:3846465 NCBI chrNW_004936473:18,825,969...18,833,179 JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:2679928|PMID:14605369) MGI PMID:14605369 MGI:MGI:2679928 NCBI chrNW_004936470:28,303,213...28,566,470 JBrowse link
G Fezf1 FEZ family zinc finger 1 ISO (MGI:MGI:3702790|PMID:16971467) MGI PMID:16971467 MGI:MGI:3702790 NCBI chrNW_004936605:3,027,138...3,030,442 JBrowse link
G Fut1 fucosyltransferase 1 (H blood group) ISO (MGI:MGI:3701717|PMID:16884711) UniProt PMID:16884711 MGI:MGI:3701717 NCBI chrNW_004936664:2,822,972...2,824,331 JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3829299|PMID:19109490) MGI PMID:19109490 MGI:MGI:3829299 NCBI chrNW_004936532:5,236,175...5,238,689 JBrowse link
G Kif14 kinesin family member 14 ISO (MGI:MGI:5485315|PMID:23308235), (MGI:MGI:5605219|PMID:24931760) UniProtKB PMID:23308235, PMID:24931760 MGI:MGI:5485315, MGI:MGI:5605219 NCBI chrNW_004936567:3,704,672...3,764,111 JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:MGI:4397621|PMID:19820705) MGI PMID:19820705 MGI:MGI:4397621 NCBI chrNW_004936487:12,395,817...12,413,860 JBrowse link
G LOC101964456 ectonucleotide pyrophosphatase/phosphodiesterase family member 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:21168496) BHF-UCL PMID:21168496 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chrNW_004936809:902,938...967,771 JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:MGI:3527227|PMID:12527005)
(MGI:MGI:2151063|PMID:11997145)
MGI PMID:11997145, PMID:12527005 MGI:MGI:2151063, MGI:MGI:3527227 NCBI chrNW_004936564:4,432,556...4,453,056 JBrowse link
G Pax6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chrNW_004936533:5,952,529...5,980,889 JBrowse link
G Pcnt pericentrin ISO (MGI:MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:MGI:4438783 NCBI chrNW_004936778:149,844...248,905 JBrowse link
G Rpgrip1l RPGRIP1 like ISO (MGI:MGI:3716248|PMID:17558409) MGI PMID:17558409 MGI:MGI:3716248 NCBI chrNW_004936475:6,219,187...6,321,612 JBrowse link
G Sall1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) MGI PMID:18024993 MGI:MGI:4420747 NCBI chrNW_004936475:4,106,663...4,121,356 JBrowse link
G Ski SKI proto-oncogene ISO (MGI:MGI:2176418|PMID:11731796) MGI PMID:11731796 MGI:MGI:2176418 NCBI chrNW_004936737:1,223,653...1,274,664 JBrowse link
G Slit1 slit guidance ligand 1 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (MGI:MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:MGI:5014119 NCBI chrNW_004936488:16,258,247...16,306,077 JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Slit3 slit guidance ligand 3 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chrNW_004936622:191,165...756,552 JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 ISO (PMID:15207848) UniProtKB PMID:15207848 NCBI chrNW_004936505:4,329,428...4,711,310 JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:15207848) UniProtKB PMID:15207848 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725) MGI PMID:15677725 MGI:MGI:3574008 NCBI chrNW_004936836:295,090...306,756 JBrowse link
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:MGI:3709518 NCBI chrNW_004936750:107,689...122,679 JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 ISO (MGI:MGI:5461281|PMID:23090999) MGI PMID:23090999 MGI:MGI:5461281 NCBI chrNW_004936664:3,713,527...3,717,824 JBrowse link
G Robo1 roundabout guidance receptor 1 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chrNW_004936505:4,329,428...4,711,310 JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (MGI:MGI:3702250|PMID:17360927) UniProtKB PMID:17360927 MGI:MGI:3702250 NCBI chrNW_004936505:5,544,011...6,747,417 JBrowse link
G Sall3 spalt like transcription factor 3 ISO (MGI:MGI:3798379|PMID:18260139) MGI PMID:18260139 MGI:MGI:3798379 NCBI chrNW_004936616:903,220...922,635 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:5285122|PMID:21539518) UniProtKB PMID:21539518 MGI:MGI:5285122 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 ISO (MGI:MGI:5461281|PMID:23090999) MGI PMID:23090999 MGI:MGI:5461281 NCBI chrNW_004936664:3,713,527...3,717,824 JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO (MGI:MGI:3778596|PMID:18184563) MGI PMID:18184563 MGI:MGI:3778596 NCBI chrNW_004936846:528,768...584,599 JBrowse link
G Dlx5 distal-less homeobox 5 ISO (MGI:MGI:5774924|PMID:25937343) MGI PMID:25937343 MGI:MGI:5774924 NCBI chrNW_004936585:3,462,063...3,466,641 JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO (MGI:MGI:3527369|PMID:15543145) UniProtKB PMID:15543145 MGI:MGI:3527369 NCBI chrNW_004936586:4,065,767...5,100,690 JBrowse link
G Gsx2 GS homeobox 2 ISO (MGI:MGI:1926244|PMID:11060228) MGI PMID:11060228 MGI:MGI:1926244 NCBI chrNW_004936482:16,703,936...16,706,224 JBrowse link
G Sall1 spalt like transcription factor 1 ISO (MGI:MGI:4420747|PMID:18024993) UniProtKB PMID:18024993 MGI:MGI:4420747 NCBI chrNW_004936475:4,106,663...4,121,356 JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogdh oxoglutarate dehydrogenase ISO (PMID:16901643) UniProtKB PMID:16901643 NCBI chrNW_004936478:19,506,845...19,584,411 JBrowse link
G Pax6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chrNW_004936533:5,952,529...5,980,889 JBrowse link
G Sall1 spalt like transcription factor 1 ISO (PMID:18024993) UniProtKB PMID:18024993 NCBI chrNW_004936475:4,106,663...4,121,356 JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:21168496) BHF-UCL PMID:21168496 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Ogdh oxoglutarate dehydrogenase ISO (PMID:16901643) UniProtKB PMID:16901643 NCBI chrNW_004936478:19,506,845...19,584,411 JBrowse link
G Slit1 slit guidance ligand 1 ISO (MGI:MGI:3042495|PMID:14960623) MGI PMID:14960623 MGI:MGI:3042495 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Srf serum response factor ISO (MGI:MGI:3578447|PMID:15837932) MGI PMID:15837932 MGI:MGI:3578447 NCBI chrNW_004936476:16,779,941...16,789,499 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11998
    developmental process 5648
      anatomical structure development 5286
        olfactory bulb development 42
          olfactory bulb interneuron differentiation + 16
          olfactory bulb mitral cell layer development 3
          olfactory bulb tufted cell development 0
          tangential migration from the subventricular zone to the olfactory bulb + 10
Path 2
Term Annotations click to browse term
  biological_process 11998
    developmental process 5648
      anatomical structure development 5286
        multicellular organism development 4845
          system development 4567
            nervous system development 2367
              central nervous system development 1141
                brain development 900
                  forebrain development 485
                    telencephalon development 320
                      olfactory lobe development 45
                        olfactory bulb development 42
                          olfactory bulb interneuron differentiation + 16
                          olfactory bulb mitral cell layer development 3
                          olfactory bulb tufted cell development 0
                          tangential migration from the subventricular zone to the olfactory bulb + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.