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ONTOLOGY REPORT - ANNOTATIONS


Term:cerebral cortex neuron differentiation
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Accession:GO:0021895 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex.
Comment:This term was added by GO_REF:0000021.


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cerebral cortex neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link 5 169,519,212 169,572,059 RGD:1624291
RGD:1600115
G Emx1 empty spiracles homeobox 1 JBrowse link 4 116,967,646 116,984,136 RGD:1624291
G Eomes eomesodermin JBrowse link 8 127,144,367 127,152,618 RGD:1624291
RGD:1600115
G Fezf2 Fez family zinc finger 2 JBrowse link 15 12,825,333 12,831,496 RGD:1624291
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 JBrowse link 1 164,337,176 164,418,056 RGD:1624291
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
G Id4 inhibitor of DNA binding 4, HLH protein JBrowse link 17 16,692,557 16,695,126 RGD:1624291
G Lhx6 LIM homeobox 6 JBrowse link 3 15,409,349 15,433,504 RGD:1624291
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:1624291
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 20 47,286,843 47,306,318 RGD:1624291
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 JBrowse link 10 61,456,144 61,577,412 RGD:1601501
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G RGD1563888 similar to DNA segment, Chr 16, ERATO Doi 472, expressed JBrowse link 11 17,073,296 17,120,235 RGD:1624291
G Sin3a SIN3 transcription regulator family member A JBrowse link 8 61,748,590 61,803,314 RGD:1624291
G Tox thymocyte selection-associated high mobility group box JBrowse link 5 19,892,698 20,189,721 RGD:1600115
G Zfp335 zinc finger protein 335 JBrowse link 3 161,357,201 161,378,073 RGD:1624291
RGD:1600115
Cajal-Retzius cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Rac3 Rac family small GTPase 3 JBrowse link 10 109,903,920 109,906,596 RGD:1624291
RGD:1600115
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
G Dlx1 distal-less homeobox 1 JBrowse link 3 58,164,931 58,169,521 RGD:1624291
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:1624291
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:1600115
RGD:1624291
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlx1 distal-less homeobox 1 JBrowse link 3 58,164,931 58,169,521 RGD:1624291
RGD:1600115
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:1624291
RGD:1600115
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arx aristaless related homeobox JBrowse link X 62,363,757 62,376,139 RGD:1624291
RGD:1600115
G Cntn2 contactin 2 JBrowse link 13 49,280,913 49,314,061 RGD:1624291
RGD:1600115
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:1624291
RGD:1600115
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:1624291
G Fezf2 Fez family zinc finger 2 JBrowse link 15 12,825,333 12,831,496 RGD:1624291
G Lhx6 LIM homeobox 6 JBrowse link 3 15,409,349 15,433,504 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19334
    developmental process 6638
      anatomical structure development 6107
        forebrain development 507
          cerebral cortex neuron differentiation 27
            Cajal-Retzius cell differentiation 1
            Meynert cell differentiation + 0
            cerebral cortex GABAergic interneuron differentiation + 12
            hippocampal interneuron differentiation 0
Path 2
Term Annotations click to browse term
  biological_process 19334
    developmental process 6638
      anatomical structure development 6107
        multicellular organism development 5579
          system development 5100
            nervous system development 2602
              neurogenesis 1884
                generation of neurons 1749
                  neuron differentiation 1575
                    central nervous system neuron differentiation 237
                      cerebral cortex neuron differentiation 27
                        Cajal-Retzius cell differentiation 1
                        Meynert cell differentiation + 0
                        cerebral cortex GABAergic interneuron differentiation + 12
                        hippocampal interneuron differentiation 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.