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ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system projection neuron axonogenesis
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Accession:GO:0021952 term browser browse the term
Definition:Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region.
Synonyms:narrow_synonym: central nervous system axon tract development


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central nervous system projection neuron axonogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chr 4:69,801,619...69,803,375 JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
G DCLK1 doublecortin like kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr11:11,815,258...12,159,085
Ensembl chr11:11,815,803...12,198,630
JBrowse link
G DCX doublecortin IEA Ensembl GO_REF:0000107 NCBI chr  X:91,317,671...91,644,572
Ensembl chr  X:91,323,768...91,644,567
JBrowse link
G EPHB1 EPH receptor B1 IEA Ensembl GO_REF:0000107 NCBI chr13:75,904,678...76,351,540
Ensembl chr13:75,905,610...76,345,564
JBrowse link
G EPHB2 EPH receptor B2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:80,649,098...80,849,979
Ensembl chr 6:80,649,143...80,843,567
JBrowse link
G EPHB3 EPH receptor B3 IEA Ensembl GO_REF:0000107 NCBI chr13:122,467,561...122,488,296
Ensembl chr13:122,467,588...122,488,293
JBrowse link
G EPHB6 EPH receptor B6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:7,346,793...7,419,859
Ensembl chr18:7,346,565...7,580,591
JBrowse link
G MYCBP2 MYC binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr11:49,163,969...49,432,865
Ensembl chr11:49,164,141...49,432,858
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 IEA Ensembl GO_REF:0000107 NCBI chr15:63,487,051...63,506,249
Ensembl chr15:63,487,698...63,505,244
JBrowse link
G PRDM8 PR/SET domain 8 ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chr 8:137,604,805...137,611,389
Ensembl chr 8:137,603,847...137,612,651
JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 IEA Ensembl GO_REF:0000107 NCBI chr 6:48,729,839...48,812,799
Ensembl chr 6:48,729,750...48,812,796
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chr 4:69,801,619...69,803,375 JBrowse link
G FBXO45 F-box protein 45 IEA Ensembl GO_REF:0000107 NCBI chr13:133,544,915...133,560,687
Ensembl chr13:133,545,394...133,560,707
JBrowse link
G NFIB nuclear factor I B IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,643
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681
JBrowse link
G PLXNA4 plexin A4 IEA Ensembl GO_REF:0000107 NCBI chr18:16,475,250...16,977,821
Ensembl chr18:16,052,663...16,973,768
JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan IEA Ensembl GO_REF:0000107 NCBI chr 9:10,927,224...10,940,851
Ensembl chr 9:10,927,342...10,942,668
JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chr 4:69,801,619...69,803,375 JBrowse link
G C5H12orf57 chromosome 5 C12orf57 homolog IEA Ensembl GO_REF:0000107 NCBI chr 5:63,779,510...63,781,307
Ensembl chr 5:63,779,511...63,781,308
JBrowse link
G NIN ninein IEA Ensembl GO_REF:0000107 NCBI chr 1:180,477,269...180,621,980
Ensembl chr 1:180,479,588...180,621,895
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,567,337...48,735,838
JBrowse link
G PRDM8 PR/SET domain 8 ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chr 8:137,604,805...137,611,389
Ensembl chr 8:137,603,847...137,612,651
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex IEA Ensembl GO_REF:0000107 NCBI chr 6:167,811,589...167,861,321
Ensembl chr 6:167,811,594...167,861,307
JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan IEA Ensembl GO_REF:0000107 NCBI chr 9:10,927,224...10,940,851
Ensembl chr 9:10,927,342...10,942,668
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655
JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCN1B sodium voltage-gated channel beta subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:44,597,461...44,607,488
Ensembl chr 6:44,597,713...44,607,490
JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT2 slit guidance ligand 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,756,619...15,149,510
JBrowse link
corticospinal tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chr 4:69,801,619...69,803,375 JBrowse link
G CDH11 cadherin 11 IEA Ensembl GO_REF:0000107 NCBI chr 6:25,782,746...25,933,753
Ensembl chr 6:25,783,595...25,933,634
JBrowse link
G EPHA4 EPH receptor A4 IEA Ensembl GO_REF:0000107 NCBI chr15:123,350,867...123,501,872
Ensembl chr15:123,352,813...123,503,126
JBrowse link
G FBXO45 F-box protein 45 IEA Ensembl GO_REF:0000107 NCBI chr13:133,544,915...133,560,687
Ensembl chr13:133,545,394...133,560,707
JBrowse link
G NIN ninein IEA Ensembl GO_REF:0000107 NCBI chr 1:180,477,269...180,621,980
Ensembl chr 1:180,479,588...180,621,895
JBrowse link
G PRDM8 PR/SET domain 8 ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chr 8:137,604,805...137,611,389
Ensembl chr 8:137,603,847...137,612,651
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655
JBrowse link
spinal cord ventral commissure morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADARB1 adenosine deaminase RNA specific B1 IEA Ensembl GO_REF:0000107 NCBI chr13:207,746,915...207,791,809
Ensembl chr13:207,693,698...207,791,796
JBrowse link
G DCC DCC netrin 1 receptor IEA Ensembl GO_REF:0000107 NCBI chr 1:101,518,629...103,087,021
Ensembl chr 1:102,080,200...103,087,249
JBrowse link
G GLI2 GLI family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16548
    developmental process 6302
      anatomical structure development 5842
        cell development 2329
          neuron development 1275
            central nervous system neuron development 103
              central nervous system neuron axonogenesis 42
                central nervous system projection neuron axonogenesis 29
                  anterior commissure morphogenesis 6
                  corpus callosum morphogenesis 8
                  corticospinal tract morphogenesis + 9
                  cuneatus tract morphogenesis 0
                  gracilis tract morphogenesis 0
                  medulla reticulospinal tract morphogenesis 0
                  pons reticulospinal tract morphogenesis 0
                  posterior commissure morphogenesis 0
                  rubrospinal tract morphogenesis 0
                  spinal cord ventral commissure morphogenesis 3
                  spinothalamic tract morphogenesis 0
                  tectobulbar tract morphogenesis 0
                  tectospinal tract morphogenesis 0
                  trigeminothalamic tract morphogenesis 0
                  vestibulospinal tract morphogenesis 0
Path 2
Term Annotations click to browse term
  biological_process 16548
    developmental process 6302
      anatomical structure development 5842
        multicellular organism development 5340
          system development 4963
            nervous system development 2592
              neurogenesis 1866
                generation of neurons 1718
                  neuron differentiation 1560
                    neuron development 1275
                      neuron projection development 1120
                        neuron projection morphogenesis 691
                          axonogenesis 470
                            central nervous system neuron axonogenesis 42
                              central nervous system projection neuron axonogenesis 29
                                anterior commissure morphogenesis 6
                                corpus callosum morphogenesis 8
                                corticospinal tract morphogenesis + 9
                                cuneatus tract morphogenesis 0
                                gracilis tract morphogenesis 0
                                medulla reticulospinal tract morphogenesis 0
                                pons reticulospinal tract morphogenesis 0
                                posterior commissure morphogenesis 0
                                rubrospinal tract morphogenesis 0
                                spinal cord ventral commissure morphogenesis 3
                                spinothalamic tract morphogenesis 0
                                tectobulbar tract morphogenesis 0
                                tectospinal tract morphogenesis 0
                                trigeminothalamic tract morphogenesis 0
                                vestibulospinal tract morphogenesis 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.