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ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system neuron differentiation
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Accession:GO:0021953 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system.
Comment:This term was added by GO_REF:0000021.


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central nervous system neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl11b BAF chromatin remodeling complex subunit BCL11B JBrowse link 6 131,834,097 131,927,251 RGD:1624291
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1624291
G Hoxa1 homeobox A1 JBrowse link 4 82,124,358 82,127,182 RGD:1624291
G Lmx1a LIM homeobox transcription factor 1 alpha JBrowse link 13 85,916,753 86,061,534 RGD:1624291
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:2317458
G Mnx1 motor neuron and pancreas homeobox 1 JBrowse link 4 2,376,350 2,381,308 RGD:1624291
G Nkx6-1 NK6 homeobox 1 JBrowse link 14 9,555,264 9,562,197 RGD:1624291
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:1624291
RGD:13792537
G Pou4f1 POU class 4 homeobox 1 JBrowse link 15 88,618,255 88,622,712 RGD:1624291
RGD:1600115
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:1624291
RGD:1600115
G Sox5 SRY-box transcription factor 5 JBrowse link 4 178,062,267 179,031,991 RGD:1624291
G Spock1 sparc/osteonectin, cwcv and kazal like domains proteoglycan 1 JBrowse link 17 7,675,531 7,797,863 RGD:1624291
G Tulp3 TUB like protein 3 JBrowse link 4 161,636,084 161,677,807 RGD:1624291
RGD:1600115
anterior commissure morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhlhe22 basic helix-loop-helix family, member e22 JBrowse link 2 102,685,513 102,688,624 RGD:1624291
G Fbxo45 F-box protein 45 JBrowse link 11 71,795,977 71,811,858 RGD:1624291
RGD:1600115
G Nfib nuclear factor I/B JBrowse link 5 100,436,343 100,647,962 RGD:1624291
RGD:1600115
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 20 47,286,843 47,306,318 RGD:1624291
RGD:1600115
G Plxna4 plexin A4 JBrowse link 4 59,439,489 59,883,637 RGD:1624291
RGD:1600115
G Tsku tsukushi, small leucine rich proteoglycan JBrowse link 1 163,317,281 163,328,697 RGD:1624291
RGD:1600115
Cajal-Retzius cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
RGD:1600115
canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt1 Wnt family member 1 JBrowse link 7 140,464,999 140,469,046 RGD:1624291
RGD:1600115
G Wnt2 Wnt family member 2 JBrowse link 4 45,286,845 45,332,899 RGD:1624291
RGD:1600115
G Wnt3 Wnt family member 3 JBrowse link 10 91,830,709 91,874,907 RGD:1624291
RGD:1600115
central nervous system interneuron axonogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tctn1 tectonic family member 1 JBrowse link 12 39,790,948 39,828,215 RGD:1624291
RGD:1600115
central nervous system neuron axonogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgap35 Rho GTPase activating protein 35 JBrowse link 1 78,456,409 78,573,374 RGD:1600115
RGD:1624291
G Arhgef28 Rho guanine nucleotide exchange factor 28 JBrowse link 2 25,738,514 26,011,429 RGD:1624291
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:1624291
G B4galt5 beta-1,4-galactosyltransferase 5 JBrowse link 3 164,039,731 164,055,561 RGD:1600115
RGD:1624291
G B4galt6 beta-1,4-galactosyltransferase 6 JBrowse link 18 15,462,913 15,525,584 RGD:1600115
RGD:1624291
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 2 189,088,570 189,096,785 RGD:1624291
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link 6 135,107,262 135,112,793 RGD:1624291
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:1624291
RGD:1600115
G Ndel1 nudE neurodevelopment protein 1-like 1 JBrowse link 10 55,398,919 55,456,654 RGD:1624291
RGD:1600115
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:2293300
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
RGD:1600115
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:1624291
RGD:1600115
central nervous system neuron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agbl4 ATP/GTP binding protein-like 4 JBrowse link 5
5
130,742,297
130,286,393
131,656,581
130,305,884
RGD:1624291
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 17 5,510,009 5,614,416 RGD:1600115
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
RGD:1600115
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Btg2 BTG anti-proliferation factor 2 JBrowse link 13 50,913,185 50,916,944 RGD:1624291
RGD:1600115
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1624291
RGD:1600115
G Fgf8 fibroblast growth factor 8 JBrowse link 1 265,492,949 265,498,965 RGD:2289424
G Fgfr1 Fibroblast growth factor receptor 1 JBrowse link 16 71,265,390 71,319,046 RGD:2325182
G Foxg1 forkhead box G1 JBrowse link 6 69,971,227 69,974,037 RGD:1624291
G Gabrb1 gamma-aminobutyric acid type A receptor beta 1 subunit JBrowse link 14 38,631,192 39,112,598 RGD:6480239
G Gata2 GATA binding protein 2 JBrowse link 4 120,129,028 120,142,490 RGD:1624291
RGD:1600115
G Gba2 glucosylceramidase beta 2 JBrowse link 5 59,068,081 59,079,719 RGD:1624291
RGD:1600115
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:1624291
RGD:1600115
G Lingo1 leucine rich repeat and Ig domain containing 1 JBrowse link 8 61,272,125 61,455,480 RGD:1624291
G Lmx1b LIM homeobox transcription factor 1 beta JBrowse link 3 12,608,748 12,686,937 RGD:1624291
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:1624291
RGD:1600115
G Neurog2 neurogenin 2 JBrowse link 2 231,962,517 231,963,441 RGD:1624291
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:1624291
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:1600115
RGD:1624291
central nervous system projection neuron axonogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhlhe22 basic helix-loop-helix family, member e22 JBrowse link 2 102,685,513 102,688,624 RGD:1624291
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 2 189,088,570 189,096,785 RGD:1624291
RGD:1600115
G Dclk1 doublecortin-like kinase 1 JBrowse link 2 144,646,255 144,939,389 RGD:1624291
G Dcx doublecortin JBrowse link X 115,098,675 115,175,515 RGD:1624291
RGD:1600115
G Ephb1 Eph receptor B1 JBrowse link 8 110,376,954 110,813,193 RGD:1624291
RGD:1600115
G Ephb2 Eph receptor B2 JBrowse link 5 155,024,478 155,143,539 RGD:1624291
RGD:13792537
G Ephb3 Eph receptor B3 JBrowse link 11 83,527,960 83,546,742 RGD:1624291
RGD:1600115
G Mycbp2 MYC binding protein 2 JBrowse link 15
15
87,405,472
93,678,062
87,450,812
93,901,556
RGD:1624291
RGD:1600115
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:1624291
RGD:1600115
G Prdm8 PR/SET domain 8 JBrowse link 14 13,052,776 13,073,583 RGD:1624291
G Sptbn4 spectrin, beta, non-erythrocytic 4 JBrowse link 1 84,168,494 84,254,679 RGD:1624291
RGD:1600115
cerebellar granule cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 JBrowse link 4 145,704,779 145,948,997 RGD:1624291
G Cbln1 cerebellin 1 precursor JBrowse link 19 20,607,507 20,611,316 RGD:1624291
RGD:1600115
G Grid2 glutamate ionotropic receptor delta type subunit 2 JBrowse link 4 94,068,112 95,476,864 RGD:1624291
RGD:1600115
G Kndc1 kinase non-catalytic C-lobe domain containing 1 JBrowse link 1 212,229,751 212,279,254 RGD:1624291
RGD:1600115
G Mtpn myotrophin JBrowse link 4 63,012,009 63,039,422 RGD:632797
G Nfix nuclear factor I X JBrowse link 19 25,818,640 25,914,777 RGD:1624291
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
RGD:1600115
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1624291
RGD:1600115
G Top2a DNA topoisomerase II alpha JBrowse link 10 86,901,467 86,930,947 RGD:8693630
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link 12 51,908,105 51,934,704 RGD:1624291
G Wnt7a Wnt family member 7A JBrowse link 4 122,994,425 123,040,609 RGD:1624291
RGD:1600115
cerebellar neuron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crk CRK proto-oncogene, adaptor protein JBrowse link 10 63,829,731 63,855,999 RGD:1600115
RGD:1624291
G Crkl CRK like proto-oncogene, adaptor protein JBrowse link 11 87,338,606 87,356,644 RGD:1600115
RGD:1624291
G LOC100911248 crk-like protein-like JBrowse link 11 87,778,338 87,815,049 RGD:1600115
G Nanos1 nanos C2HC-type zinc finger 1 JBrowse link 1 282,134,676 282,140,370 RGD:1624291
RGD:1600115
G Samd4b sterile alpha motif domain containing 4B JBrowse link 1 85,324,017 85,362,266 RGD:1624291
cerebellar Purkinje cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 17 5,510,009 5,614,416 RGD:1600115
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 JBrowse link 4 145,704,779 145,948,997 RGD:1624291
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Atxn2 ataxin 2 JBrowse link 12 40,264,601 40,335,637 RGD:1624291
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1600115
RGD:1624291
G Cend1 cell cycle exit and neuronal differentiation 1 JBrowse link 1 214,407,072 214,410,069 RGD:1624291
RGD:13792537
G Faim2 Fas apoptotic inhibitory molecule 2 JBrowse link 7 141,158,769 141,185,781 RGD:1624291
RGD:1600115
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 JBrowse link 8 72,029,550 72,198,363 RGD:1624291
RGD:1600115
G Ldb1 LIM domain binding 1 JBrowse link 1 265,772,729 265,798,442 RGD:1624291
RGD:1600115
G Lhx1 LIM homeobox 1 JBrowse link 10 71,843,991 71,849,293 RGD:1624291
RGD:1600115
G Lhx5 LIM homeobox 5 JBrowse link 12 41,663,000 41,671,437 RGD:1624291
RGD:1600115
G LOC100911402 cell cycle exit and neuronal differentiation protein 1-like JBrowse link 1 213,970,163 213,973,224 RGD:13792537
G Rora RAR-related orphan receptor A JBrowse link 8 75,515,886 75,616,477 RGD:1624291
RGD:1600115
G Skor2 SKI family transcriptional corepressor 2 JBrowse link 18 73,145,596 73,199,395 RGD:1624291
RGD:1600115
G Top2a DNA topoisomerase II alpha JBrowse link 10 86,901,467 86,930,947 RGD:8693630
G Ttll1 tubulin tyrosine ligase like 1 JBrowse link 7 124,338,396 124,367,719 RGD:1624291
RGD:1600115
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Rac3 Rac family small GTPase 3 JBrowse link 10 109,903,920 109,906,596 RGD:1624291
RGD:1600115
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
RGD:1600115
G Dlx1 distal-less homeobox 1 JBrowse link 3 58,164,931 58,169,521 RGD:1624291
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:1624291
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:1600115
RGD:1624291
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlx1 distal-less homeobox 1 JBrowse link 3 58,164,931 58,169,521 RGD:1624291
RGD:1600115
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:1624291
RGD:1600115
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arx aristaless related homeobox JBrowse link X 62,363,757 62,376,139 RGD:1624291
RGD:1600115
G Cntn2 contactin 2 JBrowse link 13 49,280,913 49,314,061 RGD:1624291
RGD:1600115
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:1624291
RGD:1600115
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:1624291
RGD:1600115
G Fezf2 Fez family zinc finger 2 JBrowse link 15 12,825,333 12,831,496 RGD:1624291
RGD:1600115
G Lhx6 LIM homeobox 6 JBrowse link 3 15,409,349 15,433,504 RGD:1624291
cerebral cortex neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link 5 169,519,212 169,572,059 RGD:1624291
RGD:1600115
G Emx1 empty spiracles homeobox 1 JBrowse link 4 116,967,646 116,984,136 RGD:1624291
RGD:1600115
G Eomes eomesodermin JBrowse link 8 127,144,367 127,152,618 RGD:1624291
RGD:1600115
G Fezf2 Fez family zinc finger 2 JBrowse link 15 12,825,333 12,831,496 RGD:1624291
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 JBrowse link 1 164,337,176 164,418,056 RGD:1624291
RGD:1600115
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
G Id4 inhibitor of DNA binding 4, HLH protein JBrowse link 17 16,692,557 16,695,126 RGD:1624291
RGD:1600115
G Lhx6 LIM homeobox 6 JBrowse link 3 15,409,349 15,433,504 RGD:1624291
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:1624291
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 20 47,286,843 47,306,318 RGD:1624291
RGD:1600115
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
RGD:1600115
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 JBrowse link 10 61,456,144 61,577,412 RGD:1601501
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G RGD1563888 similar to DNA segment, Chr 16, ERATO Doi 472, expressed JBrowse link 11 17,073,296 17,120,235 RGD:1624291
RGD:1600115
G Sin3a SIN3 transcription regulator family member A JBrowse link 8 61,748,590 61,803,314 RGD:1600115
RGD:1624291
G Zfp335 zinc finger protein 335 JBrowse link 3 161,357,201 161,378,073 RGD:1624291
RGD:1600115
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slit1 slit guidance ligand 1 JBrowse link 1 260,843,481 260,992,366 RGD:1624291
G Slit2 slit guidance ligand 2 JBrowse link 14 66,831,848 67,171,491 RGD:1624291
G Slit3 slit guidance ligand 3 JBrowse link 10 19,924,200 20,517,918 RGD:1624291
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Robo1 roundabout guidance receptor 1 JBrowse link 11 9,079,291 10,146,302 RGD:1600115
RGD:1624291
G Slit2 slit guidance ligand 2 JBrowse link 14 66,831,848 67,171,491 RGD:1600115
RGD:1624291
commissural neuron differentiation in spinal cord term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Draxin dorsal inhibitory axon guidance protein JBrowse link 5 164,913,085 164,943,012 RGD:1624291
RGD:13792537
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
RGD:1600115
G Bcl11b BAF chromatin remodeling complex subunit BCL11B JBrowse link 6 131,834,097 131,927,251 RGD:1624291
RGD:1600115
G Fezf2 Fez family zinc finger 2 JBrowse link 15 12,825,333 12,831,496 RGD:1624291
RGD:1600115
G Gata2 GATA binding protein 2 JBrowse link 4 120,129,028 120,142,490 RGD:1624291
RGD:1600115
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:1624291
RGD:1600115
G Satb2 SATB homeobox 2 JBrowse link 9 63,456,877 63,642,193 RGD:1624291
RGD:1600115
G Tbr1 T-box brain transcription factor 1 JBrowse link 3 47,677,720 47,685,902 RGD:1624291
RGD:13792537
corpus callosum morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhlhe22 basic helix-loop-helix family, member e22 JBrowse link 2 102,685,513 102,688,624 RGD:1624291
G Grcc10 gene rich cluster, C10 gene JBrowse link 4 157,264,383 157,266,042 RGD:1624291
G Nin ninein JBrowse link 6 92,423,412 92,527,776 RGD:1624291
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 JBrowse link 10 61,456,144 61,577,412 RGD:1624291
RGD:1600115
G Prdm8 PR/SET domain 8 JBrowse link 14 13,052,776 13,073,583 RGD:1624291
G Szt2 SZT2 subunit of KICSTOR complex JBrowse link 5 137,192,120 137,238,384 RGD:1624291
RGD:1600115
G Tsku tsukushi, small leucine rich proteoglycan JBrowse link 1 163,317,281 163,328,697 RGD:1624291
RGD:1600115
G Zeb2 zinc finger E-box binding homeobox 2 JBrowse link 3 29,857,289 29,985,932 RGD:1624291
RGD:1600115
corticospinal neuron axon guidance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Scn1b sodium voltage-gated channel beta subunit 1 JBrowse link 1 89,550,738 89,560,469 RGD:1624291
RGD:1600115
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slit2 slit guidance ligand 2 JBrowse link 14 66,831,848 67,171,491 RGD:1624291
RGD:1600115
corticospinal tract morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhlhe22 basic helix-loop-helix family, member e22 JBrowse link 2 102,685,513 102,688,624 RGD:1624291
G Cdh11 cadherin 11 JBrowse link 19 2,391,181 2,551,245 RGD:1624291
RGD:1600115
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:1624291
RGD:1600115
G Fbxo45 F-box protein 45 JBrowse link 11 71,795,977 71,811,858 RGD:1624291
RGD:1600115
G Nin ninein JBrowse link 6 92,423,412 92,527,776 RGD:1624291
G Prdm8 PR/SET domain 8 JBrowse link 14 13,052,776 13,073,583 RGD:1624291
G Zeb2 zinc finger E-box binding homeobox 2 JBrowse link 3 29,857,289 29,985,932 RGD:1624291
RGD:1600115
efferent axon development in a lateral line nerve term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Phox2b paired-like homeobox 2b JBrowse link 14 42,711,169 42,718,707 RGD:1624291
RGD:1600115
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arx aristaless related homeobox JBrowse link X 62,363,757 62,376,139 RGD:1624291
RGD:1600115
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
forebrain neuron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf8 fibroblast growth factor 8 JBrowse link 1 265,492,949 265,498,965 RGD:2289424
G Gbx2 gastrulation brain homeobox 2 JBrowse link 9 97,063,265 97,065,855 RGD:1624291
RGD:1600115
G Gnaq G protein subunit alpha q JBrowse link 1 233,382,778 233,622,584 RGD:1624291
RGD:1600115
G Lhx6 LIM homeobox 6 JBrowse link 3 15,409,349 15,433,504 RGD:1624291
RGD:13792537
G Lhx8 LIM homeobox 8 JBrowse link 2 260,572,205 260,598,744 RGD:1624291
RGD:13792537
G Rapgef2 Rap guanine nucleotide exchange factor 2 JBrowse link 2 177,836,191 178,057,378 RGD:1624291
RGD:1600115
G Sox1 SRY-box transcription factor 1 RGD:1624291
G Tfap2a transcription factor AP-2 alpha JBrowse link 17 24,653,342 24,670,457 RGD:1624291
forebrain neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:2314144
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 56,414,493 56,458,300 RGD:1624291
RGD:1600115
G Dlx1 distal-less homeobox 1 JBrowse link 3 58,164,931 58,169,521 RGD:1624291
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:1624291
G Lhx5 LIM homeobox 5 JBrowse link 12 41,663,000 41,671,437 RGD:1624291
RGD:1600115
G Lhx8 LIM homeobox 8 JBrowse link 2 260,572,205 260,598,744 RGD:1624291
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:1624291
G Otp orthopedia homeobox JBrowse link 2 24,546,393 24,554,953 RGD:1624291
RGD:1600115
G Phlda1 pleckstrin homology-like domain, family A, member 1 JBrowse link 7 54,247,460 54,249,664 RGD:70034
G Pou3f4 POU class 3 homeobox 4 JBrowse link X 82,143,789 82,145,066 RGD:1624291
RGD:1600115
G Sox1 SRY-box transcription factor 1 RGD:1624291
G Sox2 SRY-box transcription factor 2 JBrowse link 2 121,165,137 121,167,545 RGD:1624291
forebrain neuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lhx6 LIM homeobox 6 JBrowse link 3 15,409,349 15,433,504 RGD:1624291
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:1624291
RGD:1600115
G Tfap2c transcription factor AP-2 gamma JBrowse link 3 170,550,314 170,558,197 RGD:1624291
gonadotrophin-releasing hormone neuronal migration to the hypothalamus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
RGD:1600115
G Nrp2 neuropilin 2 JBrowse link 9 69,496,875 69,609,802 RGD:1624291
RGD:1600115
G Sema3a semaphorin 3A JBrowse link 4 18,170,375 18,545,190 RGD:1624291
RGD:1600115
hypothalamus gonadotrophin-releasing hormone neuron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ubb ubiquitin B JBrowse link 10 48,880,231 48,881,896 RGD:1624291
medial motor column neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lhx3 LIM homeobox 3 JBrowse link 3 3,653,861 3,662,509 RGD:1624291
RGD:1600115
G Lhx4 LIM homeobox 4 JBrowse link 13 73,348,874 73,400,416 RGD:1624291
RGD:1600115
midbrain dopaminergic neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
RGD:1600115
G Lmx1a LIM homeobox transcription factor 1 alpha JBrowse link 13 85,916,753 86,061,534 RGD:1624291
RGD:1600115
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Ryk receptor-like tyrosine kinase JBrowse link 8 111,326,339 111,398,640 RGD:1624291
RGD:1600115
G Wnt1 Wnt family member 1 JBrowse link 7 140,464,999 140,469,046 RGD:1624291
G Wnt2 Wnt family member 2 JBrowse link 4 45,286,845 45,332,899 RGD:1624291
G Wnt5a Wnt family member 5A JBrowse link 16 4,469,451 4,490,271 RGD:1624291
G Wnt9b Wnt family member 9B JBrowse link 10 91,785,892 91,808,061 RGD:1624291
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgfr1 Fibroblast growth factor receptor 1 JBrowse link 16 71,265,390 71,319,046 RGD:2325172
negative regulation of forebrain neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:1600115
RGD:1624291
G Hes1 hes family bHLH transcription factor 1 JBrowse link 11 74,312,837 74,315,249 RGD:8554692
G Hes5 hes family bHLH transcription factor 5 JBrowse link 5 172,364,421 172,365,188 RGD:8554692
G Ptger3 prostaglandin E receptor 3 JBrowse link 2 263,895,093 263,979,682 RGD:10043320
non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt9b Wnt family member 9B JBrowse link 10 91,785,892 91,808,061 RGD:1624291
RGD:1600115
olfactory bulb interneuron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atf5 activating transcription factor 5 JBrowse link 1 100,807,821 100,812,410 RGD:1624291
RGD:1600115
G Robo1 roundabout guidance receptor 1 JBrowse link 11 9,079,291 10,146,302 RGD:1624291
G Robo2 roundabout guidance receptor 2 JBrowse link 11 11,062,866 12,618,793 RGD:1624291
G Sall3 spalt-like transcription factor 3 JBrowse link 18 77,572,200 77,591,710 RGD:1624291
RGD:1600115
G Wnt5a Wnt family member 5A JBrowse link 16 4,469,451 4,490,271 RGD:1600115
RGD:1624291
olfactory bulb interneuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atf5 activating transcription factor 5 JBrowse link 1 100,807,821 100,812,410 RGD:1624291
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
G Dlx5 distal-less homeobox 5 JBrowse link 4 32,387,741 32,392,085 RGD:1624291
RGD:1600115
G Erbb4 erb-b2 receptor tyrosine kinase 4 JBrowse link 9 75,021,790 76,178,936 RGD:1600115
RGD:1624291
G Gsx2 GS homeobox 2 JBrowse link 14 35,650,985 35,652,709 RGD:1624291
RGD:1600115
G Mir200a microRNA 200a JBrowse link 5 173,489,366 173,489,454 RGD:1624291
G Mir200b microRNA 200b JBrowse link 5 173,490,144 173,490,238 RGD:1624291
G Mir200c microRNA 200c JBrowse link 4 157,236,786 157,236,854 RGD:1624291
G Mir3597-1 microRNA 3597-1 JBrowse link 2 187,582,790 187,582,897 RGD:1624291
G Mir9-3 microRNA 9-3 JBrowse link 1 141,229,353 141,229,442 RGD:1624291
G Sall1 spalt-like transcription factor 1 JBrowse link 19 23,387,737 23,405,025 RGD:1624291
G Uncx UNC homeobox JBrowse link 12 17,182,158 17,186,679 RGD:1624291
RGD:1600115
positive regulation of forebrain neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1624291
RGD:1600115
positive regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link 1 248,952,896 248,956,579 RGD:1624291
positive regulation of Wnt-mediated midbrain dopaminergic neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csnk1e casein kinase 1, epsilon JBrowse link 7 120,651,976 120,675,559 RGD:10448953
pyramidal neuron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:1624291
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Dclk2 doublecortin-like kinase 2 JBrowse link 2 186,116,624 186,245,937 RGD:1624291
RGD:1600115
G Dcx doublecortin JBrowse link X 115,098,675 115,175,515 RGD:1624291
RGD:1600115
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 1 200,590,951 200,696,946 RGD:1624291
G LOC103693780 2-oxoglutarate dehydrogenase, mitochondrial-like JBrowse link 14 86,599,906 86,614,963 RGD:1600115
G Ogdh oxoglutarate dehydrogenase JBrowse link 14 86,414,924 86,481,903 RGD:1624291
RGD:1600115
G Plxna3 plexin A3 JBrowse link X 156,363,400 156,379,433 RGD:1624291
RGD:1600115
G Slc4a10 solute carrier family 4 member 10 JBrowse link 3 47,995,812 48,287,897 RGD:1624291
RGD:1600115
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII JBrowse link 10 38,779,132 38,782,489 RGD:1624291
RGD:1600115
pyramidal neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Unc5d unc-5 netrin receptor D JBrowse link 16 67,047,803 67,601,002 RGD:1624291
RGD:1600115
pyramidal neuron migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Disc1 DISC1 scaffold protein JBrowse link 19 57,818,838 58,069,992 RGD:5509783
G Foxg1 forkhead box G1 JBrowse link 6 69,971,227 69,974,037 RGD:1624291
RGD:1600115
regulation of forebrain neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata2 GATA binding protein 2 JBrowse link 4 120,129,028 120,142,490 RGD:1624291
RGD:1600115
regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 16 73,372,007 73,410,777 RGD:1624291
RGD:1600115
G Sfrp2 secreted frizzled-related protein 2 JBrowse link 2 182,723,732 182,731,277 RGD:1624291
RGD:1600115
regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlx1 distal-less homeobox 1 JBrowse link 3 58,164,931 58,169,521 RGD:1624291
RGD:1600115
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:1624291
RGD:1600115
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 JBrowse link 7 2,875,898 2,905,463 RGD:1624291
RGD:1600115
regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:1624291
RGD:1600115
regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lbx1 ladybird homeobox 1 JBrowse link 1 264,973,315 264,975,132 RGD:1624291
RGD:1600115
regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx6-1 NK6 homeobox 1 JBrowse link 14 9,555,264 9,562,197 RGD:1624291
RGD:1600115
G Nkx6-2 NK6 homeobox 2 JBrowse link 1 211,922,389 211,923,929 RGD:1624291
RGD:1600115
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:1624291
RGD:1600115
regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Evx1 even-skipped homeobox 1 JBrowse link 4 82,370,829 82,374,313 RGD:1624291
G Nkx6-1 NK6 homeobox 1 JBrowse link 14 9,555,264 9,562,197 RGD:1624291
RGD:1600115
G Nkx6-2 NK6 homeobox 2 JBrowse link 1 211,922,389 211,923,929 RGD:1624291
RGD:1600115
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:1624291
RGD:1600115
retrotrapezoid nucleus neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Phox2b paired-like homeobox 2b JBrowse link 14 42,711,169 42,718,707 RGD:1624291
RGD:1600115
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:1624291
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:1624291
RGD:1600115
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 1 266,143,766 266,241,742 RGD:1624291
RGD:1600115
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:1624291
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:1624291
RGD:1600115
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 1 266,143,766 266,241,742 RGD:1624291
RGD:1600115
somatic motor neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cln8 CLN8, transmembrane ER and ERGIC protein JBrowse link 16 79,828,321 79,838,212 RGD:1624291
RGD:1600115
G Phox2a paired-like homeobox 2a JBrowse link 1 166,893,734 166,898,252 RGD:1624291
RGD:1600115
G Tctn1 tectonic family member 1 JBrowse link 12 39,790,948 39,828,215 RGD:1624291
RGD:1600115
spinal cord association neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
RGD:1600115
G Gdf7 growth differentiation factor 7 JBrowse link 6 33,496,596 33,507,626 RGD:1624291
RGD:1600115
G Gsx1 GS homeobox 1 JBrowse link 12 9,605,873 9,607,168 RGD:1624291
RGD:1600115
G Gsx2 GS homeobox 2 JBrowse link 14 35,650,985 35,652,709 RGD:1624291
RGD:1600115
G Lhx1 LIM homeobox 1 JBrowse link 10 71,843,991 71,849,293 RGD:1624291
RGD:1600115
G Lhx3 LIM homeobox 3 JBrowse link 3 3,653,861 3,662,509 RGD:1624291
RGD:1600115
G Lhx5 LIM homeobox 5 JBrowse link 12 41,663,000 41,671,437 RGD:1624291
RGD:1600115
G Lmo4 LIM domain only 4 JBrowse link 2 250,218,635 250,235,435 RGD:1624291
RGD:1600115
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 JBrowse link 20 8,515,142 8,574,632 RGD:8554528
G Pax3 paired box 3 JBrowse link 9 84,004,004 84,101,226 RGD:1624291
G Pax7 paired box 7 JBrowse link 5 158,211,001 158,313,510 RGD:1624291
RGD:1600115
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor JBrowse link 5 133,864,401 133,878,604 RGD:1624291
RGD:1600115
G Wnt1 Wnt family member 1 JBrowse link 7 140,464,999 140,469,046 RGD:1624291
RGD:1600115
G Wnt3a Wnt family member 3A JBrowse link 10 45,598,898 45,643,151 RGD:1624291
RGD:1600115
spinal cord motor neuron cell fate specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hoxc10 homeo box C10 JBrowse link 7 144,577,578 144,582,802 RGD:1624291
RGD:1600115
G Hoxd10 homeo box D10 JBrowse link 3 61,614,133 61,617,342 RGD:1624291
RGD:1600115
G Isl1 ISL LIM homeobox 1 JBrowse link 2 48,488,911 48,501,217 RGD:1624291
RGD:1600115
G Isl2 ISL LIM homeobox 2 JBrowse link 8 60,117,565 60,122,716 RGD:1624291
RGD:1600115
G Lhx3 LIM homeobox 3 JBrowse link 3 3,653,861 3,662,509 RGD:1624291
RGD:1600115
G Mnx1 motor neuron and pancreas homeobox 1 JBrowse link 4 2,376,350 2,381,308 RGD:1624291
RGD:13792537
G Olig3 oligodendrocyte transcription factor 3 JBrowse link 1 14,797,766 14,799,835 RGD:1624291
RGD:1600115
spinal cord motor neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abt1 activator of basal transcription 1 JBrowse link 17 43,946,118 43,948,224 RGD:1624291
RGD:1600115
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1624291
RGD:1600115
G Cln8 CLN8, transmembrane ER and ERGIC protein JBrowse link 16 79,828,321 79,838,212 RGD:1624291
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 8 5,217,054 5,436,969 RGD:1624291
RGD:1600115
G Gbx1 gastrulation brain homeobox 1 JBrowse link 4 7,173,961 7,200,752 RGD:1624291
RGD:1600115
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 JBrowse link 1 164,337,176 164,418,056 RGD:1624291
RGD:1600115
G Gigyf2 GRB10 interacting GYF protein 2 JBrowse link 9 94,425,191 94,550,431 RGD:1624291
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:1624291
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:1624291
G Ift172 intraflagellar transport 172 JBrowse link 6 26,390,686 26,485,459 RGD:1624291
G Ighmbp2 immunoglobulin mu DNA binding protein 2 JBrowse link 1 218,509,274 218,531,922 RGD:1624291
G Isl1 ISL LIM homeobox 1 JBrowse link 2 48,488,911 48,501,217 RGD:1624291
G Lbx1 ladybird homeobox 1 JBrowse link 1 264,973,315 264,975,132 RGD:1624291
RGD:1600115
G Lmo4 LIM domain only 4 JBrowse link 2 250,218,635 250,235,435 RGD:1624291
RGD:1600115
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 JBrowse link 6 88,442,620 89,292,454 RGD:8554528
G Mir17 microRNA 17 JBrowse link 15 100,179,879 100,179,962 RGD:1624291
G Mir18a microRNA 18a JBrowse link 15 100,180,015 100,180,110 RGD:1624291
G Mir19a microRNA 19a JBrowse link 15 100,180,162 100,180,243 RGD:1624291
G Mir19b1 microRNA 19b-1 JBrowse link 15 100,180,464 100,180,550 RGD:1624291
G Mir20a microRNA 20a JBrowse link 15 100,180,334 100,180,418 RGD:1624291
G Mir92a1 microRNA 92a-1 JBrowse link 15 100,180,586 100,180,663 RGD:1624291
G Nfe2l1 nuclear factor, erythroid 2-like 1 JBrowse link 10 84,686,762 84,699,313 RGD:1600115
RGD:1624291
G Nkx2-2 NK2 homeobox 2 JBrowse link 3 141,408,460 141,419,083 RGD:1624291
RGD:1600115
G Olig2 oligodendrocyte transcription factor 2 JBrowse link 11 31,389,514 31,392,890 RGD:1624291
RGD:1600115
G Olig3 oligodendrocyte transcription factor 3 JBrowse link 1 14,797,766 14,799,835 RGD:1624291
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:1624291
RGD:1600115
G Scyl1 SCY1 like pseudokinase 1 JBrowse link 1 221,115,992 221,129,668 RGD:1624291
RGD:1600115
G Scyl3 SCY1 like pseudokinase 3 JBrowse link 13 82,230,938 82,255,640 RGD:1624291
RGD:1600115
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:1624291
RGD:1600115
G Sox4 SRY-box transcription factor 4 JBrowse link 17 37,615,022 37,619,728 RGD:1624291
spinal cord ventral commissure morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adarb1 adenosine deaminase, RNA-specific, B1 JBrowse link 20 11,972,352 12,101,022 RGD:1624291
RGD:1600115
G Dcc DCC netrin 1 receptor JBrowse link 18 66,518,213 67,629,801 RGD:1624291
RGD:1600115
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:1624291
striatal medium spiny neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl11b BAF chromatin remodeling complex subunit BCL11B JBrowse link 6 131,834,097 131,927,251 RGD:1624291
RGD:1600115
G Inhba inhibin subunit beta A JBrowse link 17 51,894,869 51,919,998 RGD:1624291
RGD:1600115
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:1624291
RGD:1600115
G Zswim6 zinc finger, SWIM-type containing 6 JBrowse link 2 38,978,042 39,042,886 RGD:1624291
ventral spinal cord interneuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata2 GATA binding protein 2 JBrowse link 4 120,129,028 120,142,490 RGD:1624291
RGD:1600115
G Lmo4 LIM domain only 4 JBrowse link 2 250,218,635 250,235,435 RGD:1624291
RGD:1600115
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
RGD:1600115
G Dll4 delta like canonical Notch ligand 4 JBrowse link 3 111,135,011 111,146,746 RGD:1624291
RGD:1600115
G Foxn4 forkhead box N4 JBrowse link 12 48,101,012 48,121,281 RGD:1624291
RGD:1600115
ventral spinal cord interneuron fate determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-2 NK2 homeobox 2 JBrowse link 3 141,408,460 141,419,083 RGD:1624291
RGD:1600115
ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbx1 developing brain homeobox 1 JBrowse link 1 104,969,218 104,973,648 RGD:1624291
RGD:1600115
G Dmrt3 doublesex and mab-3 related transcription factor 3 JBrowse link 1 243,589,607 243,602,926 RGD:1624291
RGD:1600115
G Lhx3 LIM homeobox 3 JBrowse link 3 3,653,861 3,662,509 RGD:1624291
RGD:1600115
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:8553789
G Sox1 SRY-box transcription factor 1 RGD:1624291
visceral motor neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Isl1 ISL LIM homeobox 1 JBrowse link 2 48,488,911 48,501,217 RGD:1624291
RGD:1600115
G Isl2 ISL LIM homeobox 2 JBrowse link 8 60,117,565 60,122,716 RGD:1624291
RGD:1600115
G Tbx20 T-box transcription factor 20 JBrowse link 8 25,849,394 25,904,570 RGD:1624291
RGD:1600115
Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt5a Wnt family member 5A JBrowse link 16 4,469,451 4,490,271 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19245
    cellular process 17125
      cellular developmental process 4400
        cell differentiation 4180
          neuron differentiation 1567
            central nervous system neuron differentiation 235
              Lugaro cell differentiation 0
              candelabrum cell differentiation 0
              central nervous system neuron development + 99
              cerebellar Golgi cell differentiation 0
              cerebellar Purkinje cell differentiation 16
              cerebellar basket cell differentiation 0
              cerebellar granule cell differentiation 12
              cerebellar stellate cell differentiation 0
              cerebellar unipolar brush cell differentiation 0
              cerebral cortex neuron differentiation + 26
              commissural neuron differentiation in spinal cord + 1
              eurydendroid cell differentiation 0
              forebrain neuron differentiation + 76
              midbrain dopaminergic neuron differentiation + 13
              pyramidal neuron differentiation + 13
              retrotrapezoid nucleus neuron differentiation 1
              spinal cord association neuron differentiation + 15
              spinal cord motor neuron differentiation + 44
              ventral spinal cord interneuron differentiation + 18
Path 2
Term Annotations click to browse term
  biological_process 19245
    developmental process 6597
      anatomical structure development 6063
        multicellular organism development 5534
          system development 5081
            nervous system development 2592
              neurogenesis 1876
                generation of neurons 1741
                  neuron differentiation 1567
                    central nervous system neuron differentiation 235
                      Lugaro cell differentiation 0
                      candelabrum cell differentiation 0
                      central nervous system neuron development + 99
                      cerebellar Golgi cell differentiation 0
                      cerebellar Purkinje cell differentiation 16
                      cerebellar basket cell differentiation 0
                      cerebellar granule cell differentiation 12
                      cerebellar stellate cell differentiation 0
                      cerebellar unipolar brush cell differentiation 0
                      cerebral cortex neuron differentiation + 26
                      commissural neuron differentiation in spinal cord + 1
                      eurydendroid cell differentiation 0
                      forebrain neuron differentiation + 76
                      midbrain dopaminergic neuron differentiation + 13
                      pyramidal neuron differentiation + 13
                      retrotrapezoid nucleus neuron differentiation 1
                      spinal cord association neuron differentiation + 15
                      spinal cord motor neuron differentiation + 44
                      ventral spinal cord interneuron differentiation + 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.