Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system neuron development
go back to main search page
Accession:GO:0021954 term browser browse the term
Definition:The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron.


show annotations for term's descendants           Sort by:
 
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 ATP/GTP binding protein-like 4 ISO MGI:1918244 (MGI:6269036|PMID:30420556) RGD PMID:30420556 MGI:6269036 NCBI chr 5:130,742,297...131,656,581
NCBI chr 5:130,286,393...130,305,884
Ensembl chr 5:131,380,297...131,455,211
Ensembl chr 5:131,380,297...131,455,211
JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:5,510,009...5,614,416
Ensembl chr17:5,511,385...5,614,435
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO MGI:109619|MGI:1857470 (MGI:3615742|PMID:15169849), (MGI:3639051|PMID:16469766) RGD PMID:15169849, PMID:16469766 MGI:3615742, MGI:3639051 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Atp7a ATPase copper transporting alpha ISO MGI:1856098 (MGI:65000|PMID:8174230) RGD PMID:8174230 MGI:65000 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO MGI:3525505 (MGI:4418391|PMID:20020054) RGD PMID:20020054 MGI:4418391 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
JBrowse link
G Cdk5 cyclin-dependent kinase 5 ISO MGI:1861809 (MGI:1889058|PMID:8855328) RGD PMID:8855328 MGI:1889058 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Fgf8 fibroblast growth factor 8 IMP development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:17314281 RGD:2325182 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Foxg1 forkhead box G1 ISO (MGI:3639840|PMID:16680166) RGD PMID:16680166 MGI:3639840 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 IEP RGD PMID:15158077 RGD:6480239 NCBI chr14:38,631,192...39,112,598
Ensembl chr14:38,643,385...39,112,600
JBrowse link
G Gata2 GATA binding protein 2 ISO MGI:1857743 (MGI:1339230|PMID:10357893) RGD PMID:10357893 MGI:1339230 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gba2 glucosylceramidase beta 2 ISO
ISS
(PMID:23332916)
GO_REF:0000024
RGD
UniProt
PMID:23332916 GO_REF:0000024 NCBI chr 5:59,068,081...59,079,719
Ensembl chr 5:59,068,081...59,079,719
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO MGI:1857299 (MGI:1321418|PMID:9886073) RGD PMID:9886073 MGI:1321418 NCBI chr  X:158,196,640...158,228,815
Ensembl chr  X:158,197,149...158,228,749
JBrowse link
G Lep leptin ISO MGI:1856424 (MGI:1351081|PMID:10592285) RGD PMID:10592285 MGI:1351081 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 ISO MGI:3623893 (MGI:3722980|PMID:17726113) RGD PMID:17726113 MGI:3722980 NCBI chr 8:61,272,125...61,455,480
Ensembl chr 8:61,274,017...61,290,240
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO MGI:3696968|MGI:3696982 (MGI:3694852|PMID:17151281) RGD PMID:17151281 MGI:3694852 NCBI chr 3:12,608,748...12,686,937
Ensembl chr 3:12,609,574...12,686,869
JBrowse link
G Map2 microtubule-associated protein 2 ISO
IEA
(PMID:20846339)
GO_REF:0000107
GO_REF:0000002
RGD
Ensembl
InterPro
PMID:20846339 GO_REF:0000002, GO_REF:0000107 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link
G Neurog2 neurogenin 2 ISO MGI:2159010|MGI:2159011|MGI:2673381|MGI:96919 (MGI:3612224|PMID:16410412) RGD PMID:16410412 MGI:3612224 NCBI chr 2:231,962,517...231,963,441
Ensembl chr 2:231,962,517...231,963,308
JBrowse link
G Npy neuropeptide Y ISO (PMID:20846339) RGD PMID:20846339 NCBI chr 4:79,557,856...79,565,059
Ensembl chr 4:79,557,854...79,565,097
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 IEA
ISO
ISS
GO_REF:0000107
(MGI:1343962|PMID:8402890)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8402890 GO_REF:0000024, GO_REF:0000107, MGI:1343962 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO MGI:5588394 (MGI:6362140|PMID:31537781) RGD PMID:31537781 MGI:6362140 NCBI chr 8:49,106,374...49,109,981
Ensembl chr 8:49,106,374...49,109,981
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 ISO MGI:4440742 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:102,685,513...102,688,624
Ensembl chr 2:102,685,513...102,688,624
JBrowse link
G Fbxo45 F-box protein 45 IEA
ISO
GO_REF:0000107
MGI:3849742 (MGI:3849342|PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107, MGI:3849342 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498
JBrowse link
G Nfib nuclear factor I/B ISS
ISO
GO_REF:0000024
(MGI:4453290|PMID:19961580)
UniProt
RGD
PMID:19961580 GO_REF:0000024, MGI:4453290 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 ISO MGI:2176490 (MGI:2151063|PMID:11997145) RGD PMID:11997145 MGI:2151063 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Plxna4 plexin A4 ISO MGI:3578655 (MGI:3578029|PMID:15814794) RGD PMID:15814794 MGI:3578029 NCBI chr 4:59,439,489...59,883,637
Ensembl chr 4:59,445,767...59,809,321
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan IEA
ISO
GO_REF:0000107
MGI:4867728 (MGI:4848234|PMID:21055390)
Ensembl
RGD
PMID:21055390 GO_REF:0000107, MGI:4848234 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 ISO MGI:3716885 (MGI:3610767|PMID:16357211) RGD PMID:16357211 MGI:3610767 NCBI chr12:39,790,948...39,828,215
Ensembl chr12:39,790,965...39,824,064
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 IEA
ISO
ISS
GO_REF:0000107
(MGI:1933687|PMID:11283609)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11283609 GO_REF:0000024, GO_REF:0000107, MGI:1933687 NCBI chr 1:78,456,409...78,573,374
Ensembl chr 1:78,456,409...78,573,374
JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 ISO (MGI:3056242|PMID:15378065) RGD PMID:15378065 MGI:3056242 NCBI chr 2:25,738,514...26,011,429
Ensembl chr 2:25,738,514...26,011,429
JBrowse link
G Atg7 autophagy related 7 ISO MGI:3587769 (MGI:4829568|PMID:20577052) RGD PMID:20577052 MGI:4829568 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 ISO (MGI:6196231|PMID:30114188) RGD PMID:30114188 MGI:6196231 NCBI chr 3:164,039,731...164,055,561
Ensembl chr 3:164,039,731...164,095,878
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 ISS
ISO
IEA
GO_REF:0000024
(MGI:6196231|PMID:30114188)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30114188 GO_REF:0000024, GO_REF:0000107, MGI:6196231 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO MGI:2158714 (MGI:3721829|PMID:12097474) RGD PMID:12097474 MGI:3721829 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (MGI:6148478|PMID:24286867) RGD PMID:24286867 MGI:6148478 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (MGI:6148478|PMID:24286867) RGD PMID:24286867 MGI:6148478 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 ISO (MGI:3047464|PMID:15208636) RGD PMID:15208636 MGI:3047464 NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18062921 RGD:2293300 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:3629385|PMID:16675393) RGD PMID:16675393 MGI:3629385 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptk2 protein tyrosine kinase 2 IEA
ISO
GO_REF:0000107
MGI:1857596 (MGI:3056242|PMID:15378065)
Ensembl
RGD
PMID:15378065 GO_REF:0000107, MGI:3056242 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 ISO MGI:2684610|MGI:4440742|MGI:4440744 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:102,685,513...102,688,624
Ensembl chr 2:102,685,513...102,688,624
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO MGI:1926253|MGI:2158714 (MGI:2181503|PMID:11344259), (MGI:2683795|PMID:14687550), (MGI:3527366|PMID:15608630) RGD PMID:11344259, PMID:14687550, PMID:15608630 MGI:2181503, MGI:2683795, MGI:3527366 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Dclk1 doublecortin-like kinase 1 ISO MGI:1277171 (MGI:3614628|PMID:16387638) RGD PMID:16387638 MGI:3614628 NCBI chr 2:144,646,255...144,939,389
Ensembl chr 2:144,646,308...144,936,927
JBrowse link
G Dcx doublecortin IEA
ISO
GO_REF:0000107
MGI:1330861 (MGI:3614628|PMID:16387638)
Ensembl
RGD
PMID:16387638 GO_REF:0000107, MGI:3614628 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Ephb1 Eph receptor B1 ISS
ISO
GO_REF:0000024
MGI:2677305|MGI:2677312 (MGI:2675767|PMID:12971893)
UniProt
RGD
PMID:12971893 GO_REF:0000024, MGI:2675767 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Ephb2 Eph receptor B2 IBA
ISO
PMID:21873635
(MGI:2675767|PMID:12971893)
RGD PMID:12971893, PMID:21873635 MGI:2675767, RGD:13792537 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ephb3 Eph receptor B3 ISO (MGI:2675767|PMID:12971893) RGD PMID:12971893 MGI:2675767 NCBI chr11:83,527,960...83,546,742
Ensembl chr11:83,527,962...83,546,674
JBrowse link
G Ephb6 Eph receptor B6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:70,903,253...70,918,514
Ensembl chr 4:70,903,253...70,918,514
JBrowse link
G Mycbp2 MYC binding protein 2 ISO MGI:3777464|MGI:3777465 (MGI:3759703|PMID:17901218), (MGI:3776727|PMID:18031680) RGD PMID:17901218, PMID:18031680 MGI:3759703, MGI:3776727 NCBI chr15:87,405,472...87,450,812
NCBI chr15:93,678,062...93,901,556
Ensembl chr15:87,506,959...93,868,301
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 IEA
ISO
GO_REF:0000107
MGI:2157566 (MGI:1350702|PMID:10585298)
Ensembl
RGD
PMID:10585298 GO_REF:0000107, MGI:1350702 NCBI chr 3:43,111,258...43,128,391
Ensembl chr 3:43,111,240...43,119,159
JBrowse link
G Prdm8 PR/SET domain 8 ISO MGI:5315763 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr14:13,052,776...13,073,583
Ensembl chr14:13,054,771...13,058,172
JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 ISO MGI:3710201 (MGI:3708238|PMID:17197442) RGD PMID:17197442 MGI:3708238 NCBI chr 1:84,168,494...84,254,679
Ensembl chr 1:84,168,495...84,254,645
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein ISO MGI:104686 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein ISO MGI:88508 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 ISO (MGI:5703669|PMID:26609159) RGD PMID:26609159 MGI:5703669 NCBI chr 1:282,134,676...282,140,370
Ensembl chr 1:282,134,981...282,135,772
JBrowse link
G Samd4b sterile alpha motif domain containing 4B ISO (MGI:5703669|PMID:26609159) RGD PMID:26609159 MGI:5703669 NCBI chr 1:85,324,017...85,362,266
Ensembl chr 1:85,324,043...85,362,241
JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 ISO MGI:2180784 (MGI:5569596|PMID:23258346) RGD PMID:23258346 MGI:5569596 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rac3 Rac family small GTPase 3 ISO MGI:97845 (MGI:5569596|PMID:23258346) RGD PMID:23258346 MGI:5569596 NCBI chr10:109,903,920...109,906,596
Ensembl chr10:109,904,259...109,906,232
JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox IEA
ISO
GO_REF:0000107
MGI:2679972 (MGI:3709215|PMID:17460091)
Ensembl
RGD
PMID:17460091 GO_REF:0000107, MGI:3709215 NCBI chr  X:62,363,757...62,376,139
Ensembl chr  X:62,363,757...62,376,143
JBrowse link
G Cntn2 contactin 2 IEA
ISO
GO_REF:0000107
(MGI:2155629|PMID:11714688)
Ensembl
RGD
PMID:11714688 GO_REF:0000107, MGI:2155629 NCBI chr13:49,280,913...49,314,061
Ensembl chr13:49,285,310...49,313,940
JBrowse link
G Drd1 dopamine receptor D1 IEA
ISO
GO_REF:0000107
MGI:1857875 (MGI:3709536|PMID:17409246)
Ensembl
RGD
PMID:17409246 GO_REF:0000107, MGI:3709536 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:1857875 (MGI:3709536|PMID:17409246) RGD PMID:17409246 MGI:3709536 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Fezf2 Fez family zinc finger 2 ISO MGI:3046867 (MGI:5140686|PMID:21338885) RGD PMID:21338885 MGI:5140686 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
JBrowse link
G Lhx6 LIM homeobox 6 ISO MGI:3702518 (MGI:3702257|PMID:17376969) RGD PMID:17376969 MGI:3702257 NCBI chr 3:15,409,349...15,433,504
Ensembl chr 3:15,411,939...15,433,252
JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT ISO (PMID:11748139) RGD PMID:11748139 NCBI chr 1:260,843,481...260,992,366
Ensembl chr 1:260,843,483...260,992,366
JBrowse link
G Slit2 slit guidance ligand 2 NOT ISO (PMID:11748139) RGD PMID:11748139 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
G Slit3 slit guidance ligand 3 NOT ISO (PMID:11748139) RGD PMID:11748139 NCBI chr10:19,924,200...20,517,918
Ensembl chr10:20,320,878...20,518,518
JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 IEA
ISO
GO_REF:0000107
(PMID:15207848)
Ensembl
RGD
PMID:15207848 GO_REF:0000107 NCBI chr11:9,079,291...10,146,302
Ensembl chr11:9,642,365...10,143,317
JBrowse link
G Slit2 slit guidance ligand 2 IEA
ISO
GO_REF:0000107
(PMID:15207848)
Ensembl
RGD
PMID:15207848 GO_REF:0000107 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 ISO MGI:2684610|MGI:4440742|MGI:4440744 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:102,685,513...102,688,624
Ensembl chr 2:102,685,513...102,688,624
JBrowse link
G Grcc10 gene rich cluster, C10 gene ISO (PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461) RGD PMID:23453665, PMID:23453666, PMID:23633300, PMID:24798461 NCBI chr 4:157,264,383...157,266,042
Ensembl chr 4:157,264,383...157,266,018
JBrowse link
G Nin ninein ISO MGI:1344407 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 6:92,423,412...92,527,776
Ensembl chr 6:92,433,381...92,527,711
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 ISO (PMID:9063735) RGD PMID:9063735 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Prdm8 PR/SET domain 8 ISO MGI:5315763 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr14:13,052,776...13,073,583
Ensembl chr14:13,054,771...13,058,172
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex ISO (PMID:23932106) RGD PMID:23932106 NCBI chr 5:137,192,120...137,238,384
Ensembl chr 5:137,190,875...137,238,354
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan IEA
ISO
GO_REF:0000107
MGI:4867728 (MGI:4848234|PMID:21055390)
Ensembl
RGD
PMID:21055390 GO_REF:0000107, MGI:4848234 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1b sodium voltage-gated channel beta subunit 1 ISO MGI:3043422 (MGI:3778100|PMID:18354028) RGD PMID:18354028 MGI:3778100 NCBI chr 1:89,550,738...89,560,469
Ensembl chr 1:89,550,738...89,560,719
JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit2 slit guidance ligand 2 ISO
IEA
(PMID:10975526)
GO_REF:0000107
RGD
Ensembl
PMID:10975526 GO_REF:0000107 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
corticospinal tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 ISO MGI:2684610|MGI:4440742|MGI:4440744|MGI:99217 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:102,685,513...102,688,624
Ensembl chr 2:102,685,513...102,688,624
JBrowse link
G Cdh11 cadherin 11 ISO MGI:1930001 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr19:2,391,181...2,551,245
Ensembl chr19:2,393,059...2,551,245
JBrowse link
G Epha4 Eph receptor A4 ISS
ISO
GO_REF:0000024
(MGI:1306963|PMID:9789074)
UniProt
RGD
PMID:9789074 GO_REF:0000024, MGI:1306963 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Fbxo45 F-box protein 45 IEA
ISO
GO_REF:0000107
MGI:3849742 (MGI:3849342|PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107, MGI:3849342 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498
JBrowse link
G Nin ninein ISO MGI:1344407 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 6:92,423,412...92,527,776
Ensembl chr 6:92,433,381...92,527,711
JBrowse link
G Prdm8 PR/SET domain 8 ISO MGI:5315763 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr14:13,052,776...13,073,583
Ensembl chr14:13,054,771...13,058,172
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
efferent axon development in a lateral line nerve term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b ISO MGI:1926861 (MGI:3621705|PMID:12885554) RGD PMID:12885554 MGI:3621705 NCBI chr14:42,711,169...42,718,707
Ensembl chr14:42,714,315...42,717,010
JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox IEA
ISO
GO_REF:0000107
MGI:2429693 (MGI:3574008|PMID:15677725)
Ensembl
RGD
PMID:15677725 GO_REF:0000107, MGI:3574008 NCBI chr  X:62,363,757...62,376,139
Ensembl chr  X:62,363,757...62,376,143
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:1932522|MGI:2663662 (MGI:3709518|PMID:17409253) RGD PMID:17409253 MGI:3709518 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
forebrain neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 IMP induction of dopaminergic neurons in the rostral forebrain RGD PMID:9630220 RGD:2289424 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO MGI:1857634 (MGI:4849329|PMID:21048141) RGD PMID:21048141 MGI:4849329 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
JBrowse link
G Gnaq G protein subunit alpha q IEA
ISO
GO_REF:0000107
MGI:2151661 (MGI:3054490|PMID:15340067)
Ensembl
RGD
PMID:15340067 GO_REF:0000107, MGI:3054490 NCBI chr 1:233,382,778...233,622,584
Ensembl chr 1:233,382,708...233,622,786
JBrowse link
G Lhx6 LIM homeobox 6 IBA
ISO
PMID:21873635
MGI:1096343 (MGI:3588012|PMID:15217369)
RGD PMID:15217369, PMID:21873635 MGI:3588012, RGD:13792537 NCBI chr 3:15,409,349...15,433,504
Ensembl chr 3:15,411,939...15,433,252
JBrowse link
G Lhx8 LIM homeobox 8 IBA
ISO
PMID:21873635
MGI:1306803 (MGI:3588012|PMID:15217369)
RGD PMID:15217369, PMID:21873635 MGI:3588012, RGD:13792537 NCBI chr 2:260,572,205...260,598,744
Ensembl chr 2:260,574,190...260,596,777
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 ISS
ISO
GO_REF:0000024
(MGI:3848551|PMID:19453629)
UniProt
RGD
PMID:19453629 GO_REF:0000024, MGI:3848551 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Sox1 SRY-box transcription factor 1 ISO MGI:2137412 (MGI:3583071|PMID:15882093) RGD PMID:15882093 MGI:3583071
G Tfap2a transcription factor AP-2 alpha ISO MGI:1888387 (MGI:1855759|PMID:10803593) RGD PMID:10803593 MGI:1855759 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
gonadotrophin-releasing hormone neuronal migration to the hypothalamus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:4850173|PMID:21059704) RGD PMID:21059704 MGI:4850173 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Nrp2 neuropilin 2 ISO (MGI:4850173|PMID:21059704) RGD PMID:21059704 MGI:4850173 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087
JBrowse link
G Sema3a semaphorin 3A ISO (MGI:4850173|PMID:21059704) RGD PMID:21059704 MGI:4850173 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035
JBrowse link
hypothalamus gonadotrophin-releasing hormone neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubb ubiquitin B ISO MGI:3774112 (MGI:3776935|PMID:18299572) RGD PMID:18299572 MGI:3776935 NCBI chr10:48,880,231...48,881,896
Ensembl chr10:48,881,049...48,881,881
JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 IEA
ISO
GO_REF:0000107
MGI:5467393 (MGI:5461281|PMID:23090999)
Ensembl
RGD
PMID:23090999 GO_REF:0000107, MGI:5461281 NCBI chr 1:100,807,821...100,812,410
Ensembl chr 1:100,808,241...100,810,522
JBrowse link
G Robo1 roundabout guidance receptor 1 ISO UniProtKB:Q7TPD3 (MGI:3702250|PMID:17360927) RGD PMID:17360927 MGI:3702250 NCBI chr11:9,079,291...10,146,302
Ensembl chr11:9,642,365...10,143,317
JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (MGI:3702250|PMID:17360927) RGD PMID:17360927 MGI:3702250 NCBI chr11:11,062,866...12,618,793
Ensembl chr11:11,062,790...11,585,765
JBrowse link
G Sall3 spalt-like transcription factor 3 ISO MGI:3052730 (MGI:3798379|PMID:18260139) RGD PMID:18260139 MGI:3798379 NCBI chr18:77,572,200...77,591,710
Ensembl chr18:77,573,702...77,579,969
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
(MGI:5285122|PMID:21539518)
Ensembl
RGD
PMID:21539518 GO_REF:0000107, MGI:5285122 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
pyramidal neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 ISO MGI:2386545|MGI:3587769 (MGI:3630371|PMID:16625205) RGD PMID:16625205 MGI:3630371 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Atp7a ATPase copper transporting alpha ISO MGI:1856466 (MGI:71790|PMID:2473662) RGD PMID:2473662 MGI:71790 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Dclk2 doublecortin-like kinase 2 ISO MGI:1277171 (MGI:3844387|PMID:19342486) RGD PMID:19342486 MGI:3844387 NCBI chr 2:186,116,624...186,245,937
Ensembl chr 2:186,116,624...186,245,771
JBrowse link
G Dcx doublecortin IEA
ISO
GO_REF:0000107
MGI:1918012 (MGI:3844387|PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107, MGI:3844387 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Ogdh oxoglutarate dehydrogenase ISO (PMID:16901643) RGD PMID:16901643 NCBI chr14:86,414,924...86,481,903
Ensembl chr14:86,414,949...86,613,327
JBrowse link
G Plxna3 plexin A3 ISO MGI:2386961 (MGI:2152659|PMID:11683995) RGD PMID:11683995 MGI:2152659 NCBI chr  X:156,363,400...156,379,433
Ensembl chr  X:156,363,405...156,379,189
JBrowse link
G Scyl2 SCY1 like pseudokinase 2 IEA
ISO
GO_REF:0000107
(MGI:5694521|PMID:26203146)
Ensembl
RGD
PMID:26203146 GO_REF:0000107, MGI:5694521 NCBI chr 7:30,291,087...30,344,464
Ensembl chr 7:30,291,087...30,344,445
JBrowse link
G Slc4a10 solute carrier family 4 member 10 ISO MGI:3774019 (MGI:3772751|PMID:18165320) RGD PMID:18165320 MGI:3772751 NCBI chr 3:47,995,812...48,287,897
Ensembl chr 3:47,995,959...48,287,910
JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:38,779,132...38,782,489
Ensembl chr10:38,779,132...38,782,419
JBrowse link
pyramidal neuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 DISC1 scaffold protein IMP RGD PMID:16299498 RGD:5509783 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Foxg1 forkhead box G1 ISO (MGI:5440366|PMID:22726835) RGD PMID:22726835 MGI:5440366 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 ISO (PMID:30639322) RGD PMID:30639322 NCBI chr16:1,749,191...1,954,633
Ensembl chr16:1,749,191...1,954,614
JBrowse link
spinal cord ventral commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase, RNA-specific, B1 IEA
ISO
GO_REF:0000107
MGI:4840554 (MGI:4831065|PMID:20826656)
Ensembl
RGD
PMID:20826656 GO_REF:0000107, MGI:4831065 NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047
JBrowse link
G Dcc DCC netrin 1 receptor IEA
ISO
GO_REF:0000107
MGI:1934924 (MGI:87114|PMID:9126737)
Ensembl
RGD
PMID:9126737 GO_REF:0000107, MGI:87114 NCBI chr18:66,518,213...67,629,801
Ensembl chr18:66,523,120...67,224,566
JBrowse link
G Gli2 GLI family zinc finger 2 ISO MGI:1857509 (MGI:1340208|PMID:10409510) RGD PMID:10409510 MGI:1340208 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular developmental process 4457
        cell development 2442
          neuron development 1323
            central nervous system neuron development 101
              central nervous system neuron axonogenesis + 42
              cerebellar neuron development + 4
              cerebral cortex GABAergic interneuron development + 8
              forebrain neuron development + 36
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          system development 5279
            nervous system development 2719
              neurogenesis 1936
                generation of neurons 1780
                  neuron differentiation 1614
                    neuron development 1323
                      central nervous system neuron development 101
                        central nervous system neuron axonogenesis + 42
                        cerebellar neuron development + 4
                        cerebral cortex GABAergic interneuron development + 8
                        forebrain neuron development + 36
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.