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ONTOLOGY REPORT - ANNOTATIONS


Term:digestive system process
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Accession:GO:0022600 term browser browse the term
Definition:A physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.


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gastric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp4a ATPase H+/K+ transporting subunit alpha TAS RGD PMID:3023364 RGD:631722 NCBI chr 1:89,162,700...89,175,504
Ensembl chr 1:89,162,639...89,175,811
JBrowse link
G Cartpt CART prepropeptide TAS RGD PMID:10919272 RGD:1302914 NCBI chr 2:30,125,249...30,127,408
Ensembl chr 2:30,125,249...30,127,269
JBrowse link
G Cckar cholecystokinin A receptor IDA RGD PMID:9773935 RGD:2313338 NCBI chr14:59,610,939...59,619,786
Ensembl chr14:59,611,434...59,619,783
JBrowse link
G Cckbr cholecystokinin B receptor IEA
ISO
GO_REF:0000107
MGI:108482|MGI:2384535 (MGI:3606849|PMID:15476751)
Ensembl
RGD
PMID:15476751 GO_REF:0000107, MGI:3606849 NCBI chr 1:170,262,218...170,272,298
Ensembl chr 1:170,262,156...170,272,298
JBrowse link
G Chrm5 cholinergic receptor, muscarinic 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:103,966,451...104,018,815
Ensembl chr 3:103,966,451...104,018,861
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide IDA
IBA
PMID:17705669
PMID:21873635
UniProt
GO_Central
PMID:17705669, PMID:21873635 RGD:8553549, RGD:13792537 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Hrh2 histamine receptor H 2 ISO MGI:99479 (MGI:3606849|PMID:15476751) RGD PMID:15476751 MGI:3606849 NCBI chr17:10,912,959...10,931,389
Ensembl chr17:10,921,507...10,952,441
JBrowse link
G Nmu neuromedin U IMP RGD PMID:12584108 RGD:1642125 NCBI chr14:34,353,683...34,381,968
Ensembl chr14:34,354,503...34,381,828
JBrowse link
G Slc26a7 solute carrier family 26 member 7 ISO (MGI:3773793|PMID:12736153) RGD PMID:12736153 MGI:3773793 NCBI chr 5:27,986,656...28,131,294
Ensembl chr 5:27,986,663...28,177,340
JBrowse link
G Slc9a4 solute carrier family 9 member A4 IEA
ISO
GO_REF:0000107
MGI:3579458 (MGI:3578697|PMID:15684419)
Ensembl
RGD
PMID:15684419 GO_REF:0000107, MGI:3578697 NCBI chr 9:47,281,821...47,334,755
Ensembl chr 9:47,281,961...47,328,839
JBrowse link
G Snx10 sorting nexin 10 ISO MGI:5690193 (MGI:5688814|PMID:25811986) RGD PMID:25811986 MGI:5688814 NCBI chr 4:81,311,490...81,375,248
Ensembl chr 4:81,311,490...81,374,158
JBrowse link
gastric emptying term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd3 dopamine receptor D3 IMP RGD PMID:18600456 RGD:6907451 NCBI chr11:61,819,102...61,883,223
Ensembl chr11:61,822,077...61,874,327
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336 RGD:12907565 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Gpr39 G protein-coupled receptor 39 ISO MGI:3723512 (MGI:3722947|PMID:17030183) RGD PMID:17030183 MGI:3722947 NCBI chr13:42,008,642...42,220,737
Ensembl chr13:42,008,842...42,009,738
JBrowse link
G Ucn urocortin IDA RGD PMID:21540451 RGD:5490560 NCBI chr 6:26,602,144...26,602,974
Ensembl chr 6:26,602,144...26,602,974
JBrowse link
gastric motility term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:16012930 RGD:5131268 NCBI chr 4:85,286,371...85,329,374
Ensembl chr 4:85,286,372...85,329,362
JBrowse link
gastrin-induced gastric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrh2 histamine receptor H 2 IEA
ISO
GO_REF:0000107
MGI:2182949|MGI:3607154 (MGI:1860000|PMID:10862789), (MGI:3606849|PMID:15476751)
Ensembl
RGD
PMID:10862789, PMID:15476751 GO_REF:0000107, MGI:1860000, MGI:3606849 NCBI chr17:10,912,959...10,931,389
Ensembl chr17:10,921,507...10,952,441
JBrowse link
histamine-induced gastric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrh2 histamine receptor H 2 IEA
ISO
GO_REF:0000107
MGI:2182949|MGI:3607154 (MGI:1860000|PMID:10862789), (MGI:3606849|PMID:15476751)
Ensembl
RGD
PMID:10862789, PMID:15476751 GO_REF:0000107, MGI:1860000, MGI:3606849 NCBI chr17:10,912,959...10,931,389
Ensembl chr17:10,921,507...10,952,441
JBrowse link
intestinal absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IMP RGD PMID:24839994 RGD:11073681 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Aco1 aconitase 1 IEA
ISO
GO_REF:0000107
MGI:1928268 (MGI:3772706|PMID:18177727)
Ensembl
RGD
PMID:18177727 GO_REF:0000107, MGI:3772706 NCBI chr 5:56,425,076...56,481,218
Ensembl chr 5:56,425,024...56,481,218
JBrowse link
G Cd36 CD36 molecule ISS
ISO
GO_REF:0000024
(MGI:3718873|PMID:17507371)
UniProt
RGD
PMID:17507371 GO_REF:0000024, MGI:3718873 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G F11r F11 receptor ISO
IBA
(PMID:23885123)
(MGI:5613459|PMID:23885123)
PMID:21873635
RGD PMID:23885123, PMID:21873635 MGI:5613459, RGD:13792537 NCBI chr13:89,826,272...89,850,151
Ensembl chr13:89,826,254...89,850,612
JBrowse link
G Fabp1 fatty acid binding protein 1 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 4:99,063,181...99,066,957
Ensembl chr 4:99,063,181...99,066,954
JBrowse link
G Fabp2 fatty acid binding protein 2 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 2:227,080,912...227,083,654
Ensembl chr 2:227,080,924...227,083,501
JBrowse link
G Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type ISO MGI:3849681 (MGI:3849361|PMID:19349303) RGD PMID:19349303 MGI:3849361 NCBI chr 8:76,449,078...76,459,431
Ensembl chr 8:76,449,081...76,452,554
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEA
ISO
GO_REF:0000107
MGI:87879 (MGI:3772706|PMID:18177727)
Ensembl
RGD
PMID:18177727 GO_REF:0000107, MGI:3772706 NCBI chr 8:59,450,974...59,503,634
Ensembl chr 8:59,420,123...59,501,118
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 IMP PMID:16314573 UniProt PMID:16314573 RGD:10412292 NCBI chr 1:216,293,087...216,630,339
Ensembl chr 1:216,293,087...216,630,339
JBrowse link
G Lep leptin ISO
ISS
(PMID:24340098)
GO_REF:0000024
RGD
UniProt
PMID:24340098 GO_REF:0000024 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Mogat2 monoacylglycerol O-acyltransferase 2 ISO (MGI:3040558|PMID:14966132) RGD PMID:14966132 MGI:3040558 NCBI chr 1:164,181,762...164,205,222
Ensembl chr 1:164,181,764...164,205,222
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO MGI:1888384 (MGI:5638293|PMID:25701869) RGD PMID:25701869 MGI:5638293 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Slc26a6 solute carrier family 26 member 6 ISO (MGI:5516184|PMID:22021714) RGD PMID:22021714 MGI:5516184 NCBI chr 8:117,648,792...117,659,376
Ensembl chr 8:117,648,745...117,659,804
JBrowse link
G Slc5a1 solute carrier family 5 member 1 TAS
ISO
(MGI:3525383|PMID:15601832) RGD PMID:15601832, PMID:16204409 MGI:3525383, RGD:1624259 NCBI chr14:82,910,448...82,975,303
Ensembl chr14:82,909,981...82,975,263
JBrowse link
G Slco1a5 solute carrier organic anion transporter family, member 1A5 IMP RGD PMID:16946558 RGD:2303071 NCBI chr 4:176,445,856...176,528,117
Ensembl chr 4:176,445,858...176,528,110
JBrowse link
G Tjp2 tight junction protein 2 ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 1:241,945,816...242,084,044
Ensembl chr 1:241,945,841...242,083,484
JBrowse link
G Vdr vitamin D receptor IEA
ISO
GO_REF:0000107
MGI:2183409 (MGI:2153271|PMID:11687634)
Ensembl
RGD
PMID:11687634 GO_REF:0000107, MGI:2153271 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link
intestinal cholesterol absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISS
ISO
GO_REF:0000024
(MGI:3718873|PMID:17507371)
UniProt
RGD
PMID:17507371 GO_REF:0000024, MGI:3718873 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Ldlr low density lipoprotein receptor ISO
IEA
(PMID:17142622)
GO_REF:0000107
RGD
Ensembl
PMID:17142622 GO_REF:0000107 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Lima1 LIM domain and actin binding 1 ISO (MGI:6160379|PMID:29880681) RGD PMID:29880681 MGI:6160379 NCBI chr 7:141,428,113...141,528,447
Ensembl chr 7:141,428,063...141,528,397
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:86,345,946...86,560,694
Ensembl chr14:86,345,953...86,560,694
JBrowse link
G Pnlip pancreatic lipase IEA
ISO
GO_REF:0000107
MGI:2681122 (MGI:2679793|PMID:12915407)
Ensembl
RGD
PMID:12915407 GO_REF:0000107, MGI:2679793 NCBI chr 1:279,798,187...279,811,372
Ensembl chr 1:279,798,187...279,811,372
JBrowse link
intestinal D-glucose absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezr ezrin ISO UniProtKB:Q3V0K9|UniProtKB:Q62468 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Pls1 plastin 1 ISO UniProtKB:P26040|UniProtKB:Q62468 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link
G Slc5a1 solute carrier family 5 member 1 TAS RGD PMID:15829715 RGD:1624261 NCBI chr14:82,910,448...82,975,303
Ensembl chr14:82,909,981...82,975,263
JBrowse link
G Vil1 villin 1 ISO UniProtKB:P26040|UniProtKB:Q3V0K9 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 9:81,689,802...81,717,623
Ensembl chr 9:81,689,802...81,717,621
JBrowse link
intestinal epithelial structure maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il17a interleukin 17A IEA
ISO
GO_REF:0000107
(MGI:5788042|PMID:26431948)
Ensembl
RGD
PMID:26431948 GO_REF:0000107, MGI:5788042 NCBI chr 9:26,841,299...26,844,786
Ensembl chr 9:26,841,299...26,844,786
JBrowse link
G Inava innate immunity activator ISO (MGI:6119883|PMID:29420262) RGD PMID:29420262 MGI:6119883 NCBI chr13:53,088,438...53,108,713
Ensembl chr13:53,088,439...53,108,713
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
MGI:2429649 (MGI:3766658|PMID:17681175)
UniProt
RGD
PMID:17681175 GO_REF:0000024, MGI:3766658 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tlr4 toll-like receptor 4 IEA
ISO
GO_REF:0000107
(MGI:4421230|PMID:20051628)
Ensembl
RGD
PMID:20051628 GO_REF:0000107, MGI:4421230 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Zfp830 zinc finger protein 830 ISO MGI:4950703 (MGI:5428139|PMID:23213458) RGD PMID:23213458 MGI:5428139 NCBI chr10:70,118,250...70,119,714
Ensembl chr10:70,118,250...70,119,716
JBrowse link
intestinal lipid absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp2 fatty acid binding protein 2 IEA
ISO
GO_REF:0000107
(PMID:7883976)
Ensembl
RGD
PMID:7883976 GO_REF:0000107 NCBI chr 2:227,080,912...227,083,654
Ensembl chr 2:227,080,924...227,083,501
JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase ISS
ISO
GO_REF:0000024
(MGI:5448789|PMID:22851168)
UniProt
RGD
PMID:22851168 GO_REF:0000024, MGI:5448789 NCBI chr 5:76,376,722...76,419,564
Ensembl chr 5:76,386,836...76,419,560
JBrowse link
maintenance of gastrointestinal epithelium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin dynamics IBA
ISO
PMID:21873635
(MGI:6271776|PMID:30361697)
RGD PMID:30361697, PMID:21873635 MGI:6271776, RGD:13792537 NCBI chr14:33,649,989...33,783,794
Ensembl chr14:33,649,637...33,677,031
JBrowse link
G Muc13 mucin 13, cell surface associated ISO (PMID:17058067) RGD PMID:17058067 NCBI chr11:70,185,757...70,223,012
Ensembl chr11:70,185,757...70,211,701
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming ISO (PMID:17058067) RGD PMID:17058067 NCBI chr 1:214,663,929...214,693,197 JBrowse link
G Muc4 mucin 4, cell surface associated ISO (PMID:17058067) RGD PMID:17058067 NCBI chr11:71,242,973...71,285,217
Ensembl chr11:71,243,334...71,284,939
JBrowse link
G Muc6 mucin 6, oligomeric mucus/gel-forming IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:214,608,453...214,630,524
Ensembl chr 1:214,608,704...214,629,938
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO (PMID:17058067) RGD PMID:17058067 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Pbld1 phenazine biosynthesis-like protein domain containing 1 ISO (PMID:17929853) RGD PMID:17929853 NCBI chr20:27,103,300...27,118,650
Ensembl chr20:27,103,317...27,117,663
JBrowse link
G Rbp4 retinol binding protein 4 ISO (PMID:10944490) RGD PMID:10944490 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Strap serine/threonine kinase receptor associated protein ISO (PMID:17929853) RGD PMID:17929853 NCBI chr 4:171,730,629...171,744,877
Ensembl chr 4:171,730,635...171,745,377
JBrowse link
G Tff1 trefoil factor 1 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:8836141, PMID:21873635 RGD:625375, RGD:13792537 NCBI chr20:9,892,124...9,895,984
Ensembl chr20:9,892,124...9,895,984
JBrowse link
G Tff2 trefoil factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:9,872,669...9,876,008
Ensembl chr20:9,872,680...9,876,008
JBrowse link
G Tff3 trefoil factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:9,850,800...9,855,481
Ensembl chr20:9,850,803...9,855,481
JBrowse link
G Tlr9 toll-like receptor 9 ISO (MGI:4399015|PMID:17128265) RGD PMID:17128265 MGI:4399015 NCBI chr 8:114,916,122...114,920,171
Ensembl chr 8:114,916,122...114,920,171
JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 IEA
ISO
IBA
GO_REF:0000002
MGI:5297726 (MGI:5297312|PMID:21991385)
PMID:21873635
InterPro
RGD
PMID:21991385, PMID:21873635 GO_REF:0000002, MGI:5297312, RGD:13792537 NCBI chr  X:112,268,786...112,303,849
Ensembl chr  X:112,270,986...112,303,846
JBrowse link
mastication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
negative regulation of gastric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr39 G protein-coupled receptor 39 ISO MGI:3723512 (MGI:3722947|PMID:17030183) RGD PMID:17030183 MGI:3722947 NCBI chr13:42,008,642...42,220,737
Ensembl chr13:42,008,842...42,009,738
JBrowse link
G Nmu neuromedin U IDA PMID:12584108 UniProt PMID:12584108 RGD:1642125 NCBI chr14:34,353,683...34,381,968
Ensembl chr14:34,354,503...34,381,828
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:11764003 RGD:2304192 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:11764003 RGD:2304192 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:15961884, PMID:21873635 RGD:10043339, RGD:13792537 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
G Tff2 trefoil factor 2 IBA
ISO
PMID:21873635
MGI:2179101 (MGI:2158108|PMID:11805131)
RGD PMID:11805131, PMID:21873635 MGI:2158108, RGD:13792537 NCBI chr20:9,872,669...9,876,008
Ensembl chr20:9,872,680...9,876,008
JBrowse link
G Ucn urocortin IDA RGD PMID:21540451 RGD:5490560 NCBI chr 6:26,602,144...26,602,974
Ensembl chr 6:26,602,144...26,602,974
JBrowse link
negative regulation of gastric emptying term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmu neuromedin U IDA PMID:12584108 UniProt PMID:12584108 RGD:1642125 NCBI chr14:34,353,683...34,381,968
Ensembl chr14:34,354,503...34,381,828
JBrowse link
G Ptger1 prostaglandin E receptor 1 IMP RGD PMID:10807413 RGD:10043357 NCBI chr19:24,799,422...24,803,373
Ensembl chr19:24,800,072...24,803,373
JBrowse link
negative regulation of gastrin-induced gastric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:15961884 RGD:10043339 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
G Sct secretin IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11123201, PMID:21873635 RGD:9590235, RGD:13792537 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
negative regulation of intestinal absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg2 ATP binding cassette subfamily G member 2 IMP RGD PMID:23333829 RGD:11099975 NCBI chr 4:88,765,441...88,890,268
Ensembl chr 4:88,832,178...88,890,621
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (PMID:12469120) RGD PMID:12469120 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Isx intestine-specific homeobox ISO MGI:3703167 (MGI:5638293|PMID:25701869) RGD PMID:25701869 MGI:5638293 NCBI chr19:14,198,899...14,219,269
Ensembl chr19:14,198,899...14,218,531
JBrowse link
negative regulation of intestinal cholesterol absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
negative regulation of intestinal phytosterol absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
negative regulation of pancreatic amylase secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Madd MAP-kinase activating death domain IMP RGD PMID:23702376 RGD:9588639 NCBI chr 3:79,960,301...80,003,023
Ensembl chr 3:79,960,301...80,003,032
JBrowse link
negative regulation of pancreatic juice secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 ISO (MGI:3822255|PMID:18806227) RGD PMID:18806227 MGI:3822255 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Stk39 serine threonine kinase 39 ISO (MGI:5002793|PMID:21317537) RGD PMID:21317537 MGI:5002793 NCBI chr 3:54,359,449...54,625,702
Ensembl chr 3:54,359,451...54,625,414
JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 ISO (MGI:5002793|PMID:21317537) RGD PMID:21317537 MGI:5002793 NCBI chr 4:152,452,211...152,578,469
Ensembl chr 4:152,452,848...152,578,446
JBrowse link
G Wnk3 WNK lysine deficient protein kinase 3 ISO (MGI:5002793|PMID:21317537) RGD PMID:21317537 MGI:5002793 NCBI chr  X:20,316,081...20,459,245
Ensembl chr  X:20,316,893...20,454,357
JBrowse link
G Wnk4 WNK lysine deficient protein kinase 4 ISO (MGI:5002793|PMID:21317537) RGD PMID:21317537 MGI:5002793 NCBI chr10:89,181,139...89,198,213
Ensembl chr10:89,181,165...89,198,213
JBrowse link
negative regulation of saliva secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
pancreatic juice secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 ISO (PMID:12801959) RGD PMID:12801959 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
JBrowse link
G Aqp5 aquaporin 5 ISO (PMID:12801959) RGD PMID:12801959 NCBI chr 7:141,249,044...141,252,576
Ensembl chr 7:141,249,044...141,252,578
JBrowse link
G Cckar cholecystokinin A receptor IMP RGD PMID:16327284 RGD:2313374 NCBI chr14:59,610,939...59,619,786
Ensembl chr14:59,611,434...59,619,783
JBrowse link
G Cel carboxyl ester lipase ISO (PMID:1854805) RGD PMID:1854805 NCBI chr 3:7,134,021...7,141,522
Ensembl chr 3:7,134,021...7,141,522
JBrowse link
G Copa COPI coat complex subunit alpha ISO (PMID:1429581) RGD PMID:1429581 NCBI chr13:90,467,285...90,508,894
Ensembl chr13:90,467,265...90,508,932
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein IEP RGD PMID:10675361 RGD:2316282 NCBI chr13:36,147,667...36,156,076
Ensembl chr13:36,117,119...36,174,908
JBrowse link
G Npr3 natriuretic peptide receptor 3 IMP RGD PMID:12829435 RGD:1581460 NCBI chr 2:61,883,946...61,950,291
Ensembl chr 2:61,888,950...61,949,926
JBrowse link
G Ucn urocortin IDA RGD PMID:12895659 RGD:1642798 NCBI chr 6:26,602,144...26,602,974
Ensembl chr 6:26,602,144...26,602,974
JBrowse link
positive regulation of digestive system process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone IDA gut paracellular permeability RGD PMID:17234701 RGD:5491013 NCBI chr 2:104,459,999...104,461,863
Ensembl chr 2:104,459,999...104,461,863
JBrowse link
positive regulation of gastric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 IMP RGD PMID:11313306 RGD:1581605 NCBI chr 1:216,293,087...216,630,339
Ensembl chr 1:216,293,087...216,630,339
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 IMP RGD PMID:12007927 RGD:9835018 NCBI chr 3:177,223,779...177,231,663
Ensembl chr 3:177,225,737...177,231,663
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 IMP RGD PMID:15781048 RGD:2317117 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679
JBrowse link
positive regulation of hindgut contraction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:19258489 RGD:2304084 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:14724155 RGD:9835340 NCBI chr 7:51,273,764...51,353,700
Ensembl chr 7:51,273,771...51,353,068
JBrowse link
positive regulation of intestinal cholesterol absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 ISO (MGI:5302163|PMID:22045928) RGD PMID:22045928 MGI:5302163 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 ISO (MGI:3588413|PMID:12393855) RGD PMID:12393855 MGI:3588413 NCBI chr 8:130,548,418...130,550,388
Ensembl chr 8:130,548,418...130,550,388
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 ISS
ISO
GO_REF:0000024
(MGI:5574251|PMID:24650549)
UniProt
RGD
PMID:24650549 GO_REF:0000024, MGI:5574251 NCBI chr10:108,095,131...108,099,483
Ensembl chr10:108,095,131...108,099,483
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISS
ISO
GO_REF:0000024
(MGI:5780634|PMID:26833026)
UniProt
RGD
PMID:26833026 GO_REF:0000024, MGI:5780634 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996
JBrowse link
positive regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 ISO
IEA
(PMID:18005709)
GO_REF:0000107
RGD
Ensembl
PMID:18005709 GO_REF:0000107 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
positive regulation of pancreatic amylase secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp8 vesicle-associated membrane protein 8 ISO MGI:3056083 (MGI:3801544|PMID:18535671) RGD PMID:18535671 MGI:3801544 NCBI chr 4:100,250,301...100,252,756
Ensembl chr 4:100,250,301...100,252,755
JBrowse link
positive regulation of pancreatic juice secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 ISO (MGI:3822255|PMID:18806227) RGD PMID:18806227 MGI:3822255 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942
JBrowse link
G Sct secretin IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11123201, PMID:21873635 RGD:9590235, RGD:13792537 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 IDA RGD PMID:2755938 RGD:10044250 NCBI chr18:38,221,919...38,242,092
Ensembl chr18:38,221,681...38,242,119
JBrowse link
positive regulation of pancreatic trypsinogen secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp13 matrix metallopeptidase 13 IDA RGD PMID:12771515 RGD:724699 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
positive regulation of saliva secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IMP RGD PMID:18275933 RGD:5129135 NCBI chr 1:277,537,585...277,538,985
Ensembl chr 1:277,537,585...277,538,985
JBrowse link
G Aqp1 aquaporin 1 ISS
ISO
GO_REF:0000024
(PMID:15727941), (PMID:9096382)
UniProt
RGD
PMID:9096382, PMID:15727941 GO_REF:0000024 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:11448478 RGD:5147474 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tac4 tachykinin precursor 4 ISO (MGI:1926622|PMID:11062498) RGD PMID:11062498 MGI:1926622 NCBI chr10:83,081,168...83,089,487
Ensembl chr10:83,081,168...83,089,481
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:11448478 RGD:5147474 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
positive regulation of small intestinal transit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:21874246 RGD:12910732 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:21874246, PMID:15890336 RGD:12910732, RGD:12907565 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
regulation of digestive system process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:12690433 RGD:2304324 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:12690433 RGD:2304324 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
regulation of gastric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hip1r huntingtin interacting protein 1 related ISO (MGI:3801545|PMID:18535670) RGD PMID:18535670 MGI:3801545 NCBI chr12:38,024,517...38,053,184
Ensembl chr12:38,024,519...38,053,085
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:3611738|PMID:16314573), (MGI:5292649|PMID:19491250)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16314573, PMID:19491250 GO_REF:0000024, GO_REF:0000107, MGI:3611738, MGI:5292649 NCBI chr 1:216,293,087...216,630,339
Ensembl chr 1:216,293,087...216,630,339
JBrowse link
regulation of gastric motility term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:23525979 RGD:12907567 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:23525979 RGD:12907567 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
G Tymp thymidine phosphorylase ISO (PMID:9924029) RGD PMID:9924029 NCBI chr 7:130,342,481...130,347,845
Ensembl chr 7:130,342,483...130,347,587
JBrowse link
regulation of hindgut contraction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:16873401 RGD:1625276 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
regulation of intestinal absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IMP RGD PMID:22049154 RGD:8657330 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 ISO (MGI:5496297|PMID:23460639) RGD PMID:23460639 MGI:5496297 NCBI chr 5:150,081,727...150,243,186
Ensembl chr 5:150,084,611...150,167,077
JBrowse link
regulation of intestinal cholesterol absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 IBA
ISO
PMID:21873635
(MGI:1339009|PMID:10073953)
RGD PMID:10073953, PMID:21873635 MGI:1339009, RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 ISO MGI:2157148 (MGI:84652|PMID:8962133) RGD PMID:8962133 MGI:84652 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 IBA
ISO
PMID:21873635
MGI:2157162 (MGI:1096980|PMID:9323588)
RGD PMID:9323588, PMID:21873635 MGI:1096980, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Lep leptin ISO (MGI:2386518|PMID:12114517) RGD PMID:12114517 MGI:2386518 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 ISS
ISO
GO_REF:0000024
(MGI:5009210|PMID:9512516)
UniProt
RGD
PMID:9512516 GO_REF:0000024, MGI:5009210 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
regulation of intestinal lipid absorption term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgat1 diacylglycerol O-acyltransferase 1 IMP RGD PMID:18768481 RGD:10400848 NCBI chr 7:117,566,363...117,576,735
Ensembl chr 7:117,566,368...117,576,737
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 ISS
ISO
GO_REF:0000024
(MGI:4947032|PMID:21177474)
UniProt
RGD
PMID:21177474 GO_REF:0000024, MGI:4947032 NCBI chr10:108,095,131...108,099,483
Ensembl chr10:108,095,131...108,099,483
JBrowse link
regulation of saliva secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO (PMID:19102732) RGD PMID:19102732 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Oprk1 opioid receptor, kappa 1 ISS
ISO
GO_REF:0000024
(MGI:1197118|PMID:9463367)
UniProt
RGD
PMID:9463367 GO_REF:0000024, MGI:1197118 NCBI chr 5:13,742,655...13,760,460
Ensembl chr 5:13,744,658...13,760,305
JBrowse link
saliva secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp5 aquaporin 5 ISO MGI:2150059 (MGI:1340782|PMID:10400615), (MGI:1858888|PMID:10795927), (MGI:3612624|PMID:15647389) RGD PMID:10400615, PMID:10795927, PMID:15647389 MGI:1340782, MGI:1858888, MGI:3612624 NCBI chr 7:141,249,044...141,252,576
Ensembl chr 7:141,249,044...141,252,578
JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:224,869,087...224,885,101
Ensembl chr 1:224,882,439...224,884,205
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 ISO MGI:1888740 (MGI:1888655|PMID:10944224) RGD PMID:10944224 MGI:1888655 NCBI chr17:63,990,599...64,463,222
Ensembl chr17:63,990,599...63,994,169
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO MGI:1277957 (MGI:3695228|PMID:16873365) RGD PMID:16873365 MGI:3695228 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 IEA
ISO
GO_REF:0000107
MGI:99923 (MGI:3695228|PMID:16873365)
Ensembl
RGD
PMID:16873365 GO_REF:0000107, MGI:3695228 NCBI chr 1:81,227,855...81,245,986
Ensembl chr 1:81,230,612...81,245,996
JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 ISO MGI:3764882 (MGI:3762998|PMID:17956991) RGD PMID:17956991 MGI:3762998 NCBI chr 8:103,503,982...103,554,905
Ensembl chr 8:103,503,985...103,554,468
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    multicellular organismal process 9047
      digestion 137
        digestive system process 117
          gastric acid secretion + 22
          gastric motility + 9
          hindgut contraction + 3
          intestinal absorption + 40
          intestinal motility + 2
          maintenance of gastrointestinal epithelium + 21
          mastication 2
          negative regulation of digestive system process + 21
          pancreatic juice secretion + 19
          positive regulation of digestive system process + 21
          regulation of digestive system process + 53
          rumination 0
          saliva secretion + 15
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.