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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA strand elongation
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Accession:GO:0022616 term browser browse the term
Definition:The DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.


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DNA strand elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:1624291
DNA replication, Okazaki fragment processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dna2 DNA replication helicase/nuclease 2 RGD:1600115
G Slc25a16 solute carrier family 25 member 16 JBrowse link 20 27,283,383 27,308,069 RGD:1600115
DNA strand elongation involved in DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcm3 minichromosome maintenance complex component 3 JBrowse link 9 26,914,057 26,932,201 RGD:13792537
G Mcm4 minichromosome maintenance complex component 4 JBrowse link 11 89,511,191 89,524,892 RGD:13792537
G Mcm7 minichromosome maintenance complex component 7 JBrowse link 12 19,306,615 19,313,877 RGD:13792537
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link 5 8,973,861 9,039,616 RGD:13792537
G Pola1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 62,382,604 62,698,830 RGD:1624291
RGD:1600115
G Pold2 DNA polymerase delta 2, accessory subunit JBrowse link 14 86,111,416 86,117,578 RGD:13792537
G Pold3 DNA polymerase delta 3, accessory subunit JBrowse link 1 165,085,142 165,122,385 RGD:13792537
DNA strand elongation involved in mitotic DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gins1 GINS complex subunit 1 JBrowse link 3 146,695,366 146,716,787 RGD:13792537
lagging strand elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lig1 DNA ligase 1 JBrowse link 1 75,356,212 75,394,757 RGD:13792537
G Lig3 DNA ligase 3 JBrowse link 10 70,134,734 70,158,051 RGD:13792537
G LOC100911727 DNA ligase 1-like JBrowse link 1 75,224,143 75,264,441 RGD:13792537
G Pola1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 62,382,604 62,698,830 RGD:1600115
RGD:13792537
RGD:1624291
leading strand elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07027368.1 RGD:13792537
G LOC100362333 DNA-directed DNA polymerase epsilon 3 JBrowse link 7 118,816,053 118,816,725 RGD:13792537
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:13792537
G Pola1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 62,382,604 62,698,830 RGD:1600115
RGD:13792537
RGD:1624291
G Pole DNA polymerase epsilon, catalytic subunit JBrowse link 12 52,403,533 52,452,075 RGD:13792537
G Pole3 DNA polymerase epsilon 3, accessory subunit JBrowse link 5 78,380,813 78,384,047 RGD:13792537
Okazaki fragment processing involved in mitotic DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lig1 DNA ligase 1 JBrowse link 1 75,356,212 75,394,757 RGD:13792537
G LOC100911727 DNA ligase 1-like JBrowse link 1 75,224,143 75,264,441 RGD:13792537
positive regulation of DNA strand elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pot1 protection of telomeres 1 JBrowse link 4 51,888,632 51,946,764 RGD:1624291
regulation of DNA strand elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 JBrowse link 13 48,679,726 48,709,663 RGD:1624291
telomeric 3' overhang formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dclre1b DNA cross-link repair 1B JBrowse link 2 206,285,085 206,293,599 RGD:1600115
RGD:1624291
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:1624291
RGD:1600115
G Nbn nibrin JBrowse link 5 29,622,347 29,656,877 RGD:1624291
RGD:1600115
G Rad50 RAD50 double strand break repair protein JBrowse link 10 39,002,130 39,054,042 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    cellular process 18618
      cellular metabolic process 10918
        cellular macromolecule metabolic process 8393
          DNA metabolic process 911
            DNA strand elongation 25
              DNA strand elongation involved in DNA replication + 18
              positive regulation of DNA strand elongation 1
              regulation of DNA strand elongation + 2
              telomeric 3' overhang formation 4
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      cellular metabolic process 10918
        cellular nitrogen compound metabolic process 6542
          nucleobase-containing compound metabolic process 5344
            nucleic acid metabolic process 4850
              DNA metabolic process 911
                DNA strand elongation 25
                  DNA strand elongation involved in DNA replication + 18
                  positive regulation of DNA strand elongation 1
                  regulation of DNA strand elongation + 2
                  telomeric 3' overhang formation 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.