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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular monovalent inorganic cation homeostasis
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Accession:GO:0030004 term browser browse the term
Definition:Any process involved in the maintenance of an internal steady state of monovalent inorganic cations at the level of a cell.


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cellular ammonium homeostasis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2b transcription factor AP-2 beta ISO
ISS
(MGI:MGI:2656435|PMID:12695560)
GO_REF:0000024
RGD
UniProt
PMID:12695560 GO_REF:0000024, MGI:MGI:2656435 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
JBrowse link
cellular potassium ion homeostasis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:36,561,306...36,590,171
Ensembl chr15:36,565,495...36,590,171
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ISO
IBA
(PMID:10636900), (PMID:19542013)
PMID:21873635
(PMID:19542013)
RGD PMID:10636900, PMID:19542013, PMID:21873635 RGD:13792537 NCBI chr 2:204,003,742...204,032,023
Ensembl chr 2:204,003,742...204,032,023
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ISO
IBA
(PMID:10636900)
PMID:21873635
RGD PMID:10636900, PMID:21873635 RGD:13792537 NCBI chr13:90,651,682...90,676,629
Ensembl chr13:90,651,686...90,676,629
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ISO
IBA
(PMID:10636900)
PMID:21873635
RGD PMID:10636900, PMID:21873635 RGD:13792537 NCBI chr 1:81,852,423...81,881,565
Ensembl chr 1:81,852,429...81,881,549
JBrowse link
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:90,605,792...90,642,032
Ensembl chr13:90,605,794...90,641,772
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ISO
IBA
(PMID:10636900), (PMID:19542013)
(PMID:19542013)
PMID:21873635
RGD PMID:10636900, PMID:19542013, PMID:21873635 RGD:13792537 NCBI chr13:82,737,161...82,757,681
Ensembl chr13:82,737,159...82,758,004
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:10636900), (PMID:19542013)
Ensembl
RGD
PMID:10636900, PMID:19542013, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:56,205,622...56,211,879
Ensembl chr10:56,205,625...56,211,891
JBrowse link
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 ISO
IBA
(PMID:10636900), (PMID:19542013)
PMID:21873635
RGD PMID:10636900, PMID:19542013, PMID:21873635 RGD:13792537 NCBI chr 8:104,190,032...104,221,342
Ensembl chr 8:104,190,032...104,221,342
JBrowse link
G Atp4a ATPase H+/K+ transporting subunit alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:89,162,700...89,175,504
Ensembl chr 1:89,162,639...89,175,811
JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:81,136,218...81,145,131
Ensembl chr16:81,136,218...81,145,131
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IMP RGD PMID:11925434 RGD:724615 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Drd2 dopamine receptor D2 IC PMID:2162345 BHF-UCL PMID:2162345 RGD:8554169 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 IEA
ISO
GO_REF:0000107
(PMID:11245614)
Ensembl
RGD
PMID:11245614 GO_REF:0000107 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Kctd7 potassium channel tetramerization domain containing 7 ISO (MGI:MGI:6107400|PMID:27742667) RGD PMID:27742667 MGI:MGI:6107400 NCBI chr12:30,024,080...30,033,357
Ensembl chr12:30,024,081...30,033,357
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:MGI:6392919|PMID:11940530) RGD PMID:11940530 MGI:MGI:6392919 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
cellular sodium ion homeostasis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IMP RGD PMID:16380540 RGD:1582118 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:16380540 RGD:1582118 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:36,561,306...36,590,171
Ensembl chr15:36,565,495...36,590,171
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ISO
IBA
(PMID:10636900), (PMID:19542013)
PMID:21873635
(PMID:19542013)
RGD PMID:10636900, PMID:19542013, PMID:21873635 RGD:13792537 NCBI chr 2:204,003,742...204,032,023
Ensembl chr 2:204,003,742...204,032,023
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ISO
IBA
(PMID:10636900)
PMID:21873635
RGD PMID:10636900, PMID:21873635 RGD:13792537 NCBI chr13:90,651,682...90,676,629
Ensembl chr13:90,651,686...90,676,629
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ISO
IBA
(PMID:10636900)
PMID:21873635
(MGI:MGI:4352602|PMID:19376779)
RGD PMID:10636900, PMID:19376779, PMID:21873635 MGI:MGI:4352602, RGD:13792537 NCBI chr 1:81,852,423...81,881,565
Ensembl chr 1:81,852,429...81,881,549
JBrowse link
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:90,605,792...90,642,032
Ensembl chr13:90,605,794...90,641,772
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ISO
IBA
(PMID:10636900), (PMID:19542013)
(PMID:19542013)
PMID:21873635
RGD PMID:10636900, PMID:19542013, PMID:21873635 RGD:13792537 NCBI chr13:82,737,161...82,757,681
Ensembl chr13:82,737,159...82,758,004
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:10636900), (PMID:19542013)
Ensembl
RGD
PMID:10636900, PMID:19542013, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:56,205,622...56,211,879
Ensembl chr10:56,205,625...56,211,891
JBrowse link
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 ISO
IBA
(PMID:10636900), (PMID:19542013)
PMID:21873635
RGD PMID:10636900, PMID:19542013, PMID:21873635 RGD:13792537 NCBI chr 8:104,190,032...104,221,342
Ensembl chr 8:104,190,032...104,221,342
JBrowse link
G Atp4a ATPase H+/K+ transporting subunit alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:89,162,700...89,175,504
Ensembl chr 1:89,162,639...89,175,811
JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:81,136,218...81,145,131
Ensembl chr16:81,136,218...81,145,131
JBrowse link
G C7 complement C7 IMP RGD PMID:10792960 RGD:1599525 NCBI chr 2:54,707,621...54,781,624
Ensembl chr 2:54,709,138...54,777,729
JBrowse link
G Chp2 calcineurin-like EF hand protein 2 TAS RGD PMID:12576672 RGD:1299552 NCBI chr 1:192,169,634...192,173,228
Ensembl chr 1:192,169,841...192,173,253
JBrowse link
G Il1a interleukin 1 alpha ISO (MGI:MGI:4414613|PMID:19766171) RGD PMID:19766171 MGI:MGI:4414613 NCBI chr 3:121,824,712...121,836,122
Ensembl chr 3:121,825,412...121,836,086
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 ISO MGI:MGI:2441654 (MGI:MGI:2181312|PMID:9689096) RGD PMID:9689096 MGI:MGI:2181312 NCBI chr19:34,408,275...34,761,003
Ensembl chr19:34,448,289...34,752,695
JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 IDA RGD PMID:11250940 RGD:628514 NCBI chr 1:24,185,451...24,302,309
Ensembl chr 1:24,185,435...24,302,298
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:MGI:6392919|PMID:11940530) RGD PMID:11940530 MGI:MGI:6392919 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO MGI:MGI:1931872 (MGI:MGI:4414613|PMID:19766171) RGD PMID:19766171 MGI:MGI:4414613 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO (PMID:1374913) RGD PMID:1374913 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Slc9a1 solute carrier family 9 member A1 ISO (PMID:24840010) RGD PMID:24840010 NCBI chr 5:151,573,122...151,626,360
Ensembl chr 5:151,573,092...151,627,316
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO (MGI:MGI:3763852|PMID:17898038) RGD PMID:17898038 MGI:MGI:3763852 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
G Tmprss3 transmembrane serine protease 3 ISO (PMID:12393794) RGD PMID:12393794 NCBI chr20:9,910,522...9,929,705
Ensembl chr20:9,910,522...9,929,705
JBrowse link
G Umod uromodulin ISO (MGI:MGI:3763852|PMID:17898038) RGD PMID:17898038 MGI:MGI:3763852 NCBI chr 1:189,186,027...189,199,939
Ensembl chr 1:189,186,026...189,199,376
JBrowse link
endosomal lumen acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 ISO MGI:MGI:3528447 (MGI:MGI:3588799|PMID:16107722) RGD PMID:16107722 MGI:MGI:3588799 NCBI chr 1:162,703,394...162,713,560
Ensembl chr 1:162,703,442...162,713,610
JBrowse link
G Faslg Fas ligand IDA RGD PMID:18045865 RGD:2315735 NCBI chr13:79,696,811...79,717,581
Ensembl chr13:79,698,445...79,705,705
JBrowse link
G Tmem9 transmembrane protein 9 ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:52,854,031...52,871,300
Ensembl chr13:52,854,031...52,871,297
JBrowse link
intracellular pH elevation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5429843|PMID:21976599)
Ensembl
UniProt
RGD
PMID:21976599 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5429843 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Nox1 NADPH oxidase 1 ISO
IEA
(PMID:10615049)
GO_REF:0000107
RGD
Ensembl
PMID:10615049 GO_REF:0000107 NCBI chr  X:104,909,328...104,932,508
Ensembl chr  X:104,909,326...104,932,508
JBrowse link
G Slc26a3 solute carrier family 26 member 3 ISO
ISS
(MGI:MGI:5429843|PMID:21976599)
GO_REF:0000024
RGD
UniProt
PMID:21976599 GO_REF:0000024, MGI:MGI:5429843 NCBI chr 6:50,725,085...50,766,306
Ensembl chr 6:50,725,085...50,766,300
JBrowse link
G Slc26a6 solute carrier family 26 member 6 ISO (MGI:MGI:5429843|PMID:21976599) RGD PMID:21976599 MGI:MGI:5429843 NCBI chr 8:117,648,792...117,659,376
Ensembl chr 8:117,648,745...117,659,804
JBrowse link
intracellular pH reduction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr89b G protein-coupled receptor 89B ISO
IBA
(PMID:18794847)
PMID:21873635
RGD PMID:18794847, PMID:21873635 RGD:13792537 NCBI chr 2:198,999,945...199,038,702
Ensembl chr 2:198,999,946...199,038,702
JBrowse link
G Slc12a5 solute carrier family 12 member 5 IDA RGD PMID:16420452 RGD:2303953 NCBI chr 3:161,433,303...161,465,078
Ensembl chr 3:161,425,988...161,462,879
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 ISO (MGI:MGI:6296816|PMID:23908015) RGD PMID:23908015 MGI:MGI:6296816 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464
JBrowse link
G Ttpa alpha tocopherol transfer protein IDA RGD PMID:22147702 RGD:7247589 NCBI chr 5:34,007,926...34,029,315
Ensembl chr 5:34,007,920...34,028,452
JBrowse link
lysosomal lumen acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 ISO
ISS
(PMID:32276428)
GO_REF:0000024
RGD
UniProt
PMID:32276428 GO_REF:0000024 NCBI chr  X:11,137,889...11,164,854
Ensembl chr  X:11,136,939...11,164,915
JBrowse link
G Ccdc115 coiled-coil domain containing 115 ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:37,774,876...37,778,839
Ensembl chr 9:37,775,311...37,779,967
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO
IBA
ISS
(PMID:11722572)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:11722572, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Cln5 CLN5, intracellular trafficking protein ISO (PMID:11722572) RGD PMID:11722572 NCBI chr15:93,634,815...93,644,146 JBrowse link
G Cln6 CLN6, transmembrane ER protein ISO (PMID:11722572) RGD PMID:11722572 NCBI chr 8:67,733,215...67,748,170
Ensembl chr 8:67,733,215...67,748,172
JBrowse link
G Grn granulin precursor ISS
ISO
IEA
GO_REF:0000024
(PMID:28073925)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28073925 GO_REF:0000024, GO_REF:0000107 NCBI chr10:90,377,103...90,383,207
Ensembl chr10:90,376,933...90,383,205
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 ISO
ISS
(PMID:11722572)
PMID:8895569
RGD PMID:11722572, PMID:8895569 RGD:8553248 NCBI chr 5:140,538,260...140,558,163
Ensembl chr 5:140,538,260...140,558,162
JBrowse link
G Snapin SNAP-associated protein ISO MGI:MGI:3608768 (MGI:MGI:4879078|PMID:20920792) RGD PMID:20920792 MGI:MGI:4879078 NCBI chr 2:189,878,159...189,880,743
Ensembl chr 2:189,878,168...189,880,743
JBrowse link
G Tmem106b transmembrane protein 106B ISO MGI:MGI:5319917 (MGI:MGI:6101836|PMID:28728022) RGD PMID:28728022 MGI:MGI:6101836 NCBI chr 4:39,517,679...39,534,491
Ensembl chr 4:39,517,548...39,535,169
JBrowse link
G Tmem199 transmembrane protein 199 ISO
ISS
(PMID:28296633)
GO_REF:0000024
RGD
UniProt
PMID:28296633 GO_REF:0000024 NCBI chr10:65,775,721...65,780,293
Ensembl chr10:65,775,715...65,780,349
JBrowse link
G Tmem9 transmembrane protein 9 ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:52,854,031...52,871,300
Ensembl chr13:52,854,031...52,871,297
JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO
ISS
(PMID:10924275)
GO_REF:0000024
RGD
UniProt
PMID:10924275 GO_REF:0000024 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
negative regulation of cellular pH reduction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
(PMID:10506221)
Ensembl
RGD
PMID:10506221 GO_REF:0000107 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
phagosome acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family ISO (PMID:21255211) RGD PMID:21255211 NCBI chr16:83,358,116...83,382,326
Ensembl chr16:83,358,116...83,382,326
JBrowse link
G Rab38 RAB38, member RAS oncogene family ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 1:152,072,716...152,153,449
Ensembl chr 1:152,072,665...152,153,449
JBrowse link
G Rab39a RAB39A, member RAS oncogene family ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 8:58,275,984...58,292,995
Ensembl chr 8:58,272,098...58,293,102
JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO
ISS
(PMID:21255211)
GO_REF:0000024
RGD
UniProt
PMID:21255211 GO_REF:0000024 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Slamf8 SLAM family member 8 ISO MGI:MGI:5442794 (MGI:MGI:5442671|PMID:22593622) RGD PMID:22593622 MGI:MGI:5442671 NCBI chr13:90,967,862...90,978,752
Ensembl chr13:90,967,739...90,977,734
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 ISO MGI:MGI:3852642 (MGI:MGI:3850356|PMID:19549681) RGD PMID:19549681 MGI:MGI:3850356 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464
JBrowse link
positive regulation of cellular pH reduction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avp arginine vasopressin IMP RGD PMID:17762181 RGD:2300343 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:17762181 RGD:2300343 NCBI chr 7:67,341,366...67,345,290
Ensembl chr 7:67,341,080...67,345,308
JBrowse link
G Avpr1b arginine vasopressin receptor 1B IMP RGD PMID:17762181 RGD:2300343 NCBI chr13:48,367,307...48,378,831
Ensembl chr13:48,367,307...48,378,831
JBrowse link
G Car2 carbonic anhydrase 2 IMP
ISO
MGI:MGI:2135646 (MGI:MGI:5506965|PMID:23881097) RGD PMID:23881097, PMID:9665810 MGI:MGI:5506965, RGD:1342423 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Car7 carbonic anhydrase 7 ISO MGI:MGI:5543604 (MGI:MGI:5506965|PMID:23881097) RGD PMID:23881097 MGI:MGI:5506965 NCBI chr19:636,545...645,935
Ensembl chr19:636,545...645,937
JBrowse link
positive regulation of Golgi lumen acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube3a ubiquitin protein ligase E3A IMP
ISO
PMID:23447592
(MGI:MGI:5486513|PMID:23447592)
RGD PMID:23447592, PMID:23447592 MGI:MGI:5486513, RGD:15023469 NCBI chr 1:116,586,901...116,678,161
Ensembl chr 1:116,587,815...116,679,973
JBrowse link
regulation of cellular pH term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 IDA
ISS
ISO
GO_REF:0000024
(PMID:12112599)
UniProt
RGD
PMID:12112599, PMID:12112599 GO_REF:0000024, RGD:728364 NCBI chr13:90,605,792...90,642,032
Ensembl chr13:90,605,794...90,641,772
JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:156,407,973...156,415,053
Ensembl chr  X:156,407,937...156,415,145
JBrowse link
G Atp6ap1l ATPase H+ transporting accessory protein 1 like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:19,781,375...19,809,355
Ensembl chr 2:19,781,408...19,808,937
JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 TAS RGD PMID:15013950 RGD:1304309 NCBI chr16:22,326,537...22,350,143
Ensembl chr16:22,326,529...22,350,155
JBrowse link
G Car2 carbonic anhydrase 2 TAS RGD PMID:9665810 RGD:1342423 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Chp2 calcineurin-like EF hand protein 2 TAS RGD PMID:12576672 RGD:1299552 NCBI chr 1:192,169,634...192,173,228
Ensembl chr 1:192,169,841...192,173,253
JBrowse link
G Gpr39 G protein-coupled receptor 39 ISO (MGI:MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:MGI:5707553 NCBI chr13:42,008,642...42,220,737
Ensembl chr13:42,008,842...42,009,738
JBrowse link
G Lacc1 laccase domain containing 1 ISO (PMID:31978345) RGD PMID:31978345 NCBI chr15:59,199,537...59,217,200
Ensembl chr15:59,209,829...59,215,803
JBrowse link
G Mafg MAF bZIP transcription factor G IDA RGD PMID:11583919 RGD:633304 NCBI chr10:109,802,877...109,811,476
Ensembl chr10:109,806,159...109,811,323
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO (MGI:MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:MGI:5707553 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO (MGI:MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:MGI:5707553 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Slc4a10 solute carrier family 4 member 10 ISO MGI:MGI:3774019 (MGI:MGI:3772751|PMID:18165320) RGD PMID:18165320 MGI:MGI:3772751 NCBI chr 3:47,995,812...48,287,897
Ensembl chr 3:47,995,959...48,287,910
JBrowse link
regulation of Golgi lumen acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a7 solute carrier family 9 member A7 ISO (PMID:30335141) RGD PMID:30335141 NCBI chr  X:2,434,918...2,615,936
Ensembl chr  X:2,435,305...2,614,770
JBrowse link
regulation of intracellular pH term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1b ATP synthase F1 subunit beta IEA
ISO
GO_REF:0000107
(PMID:17510399)
Ensembl
RGD
PMID:17510399 GO_REF:0000107 NCBI chr 7:2,504,708...2,511,748
Ensembl chr 7:2,504,695...2,511,749
JBrowse link
G Car2 carbonic anhydrase 2 ISO
IBA
ISS
(MGI:MGI:4442131|PMID:20150244)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20150244, PMID:21873635 GO_REF:0000024, MGI:MGI:4442131, RGD:13792537 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Car7 carbonic anhydrase 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:636,545...645,935
Ensembl chr19:636,545...645,937
JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 ISS
ISO
GO_REF:0000024
(PMID:15035633), (PMID:8901634)
UniProt
RGD
PMID:8901634, PMID:15035633 GO_REF:0000024 NCBI chr 3:111,354,506...111,389,998
Ensembl chr 3:111,354,506...111,389,989
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 IMP RGD PMID:24935944 RGD:14985214 NCBI chr12:39,822,814...39,851,093
Ensembl chr12:39,822,637...39,850,567
JBrowse link
G Slc26a6 solute carrier family 26 member 6 ISO (MGI:MGI:4442131|PMID:20150244)
(PMID:15990874), (PMID:20501439)
RGD PMID:15990874, PMID:20150244, PMID:20501439 MGI:MGI:4442131 NCBI chr 8:117,648,792...117,659,376
Ensembl chr 8:117,648,745...117,659,804
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:90,296,144...90,312,401
Ensembl chr10:90,296,141...90,312,386
JBrowse link
G Slc4a10 solute carrier family 4 member 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:47,995,812...48,287,897
Ensembl chr 3:47,995,959...48,287,910
JBrowse link
G Slc4a2 solute carrier family 4 member 2 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:16440368, PMID:21873635 RGD:9999231, RGD:13792537 NCBI chr 4:7,264,677...7,282,355
Ensembl chr 4:7,264,683...7,281,223
JBrowse link
G Slc4a3 solute carrier family 4 member 3 ISO
IBA
IEA
(MGI:MGI:64573|PMID:2686841)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:2686841, PMID:21873635 GO_REF:0000107, MGI:MGI:64573, RGD:13792537 NCBI chr 9:82,742,207...82,755,119
Ensembl chr 9:82,741,920...82,755,153
JBrowse link
G Slc4a4 solute carrier family 4 member 4 ISO
IBA
IEA
UniProtKB:Q9JK62 (PMID:10069984), (PMID:21976511), (PMID:24453308)
PMID:21873635
(MGI:MGI:5295108|PMID:21976511), (MGI:MGI:5553185|PMID:24453308)
GO_REF:0000107
RGD
Ensembl
PMID:10069984, PMID:21976511, PMID:24453308, PMID:21873635 GO_REF:0000107, MGI:MGI:5295108, MGI:MGI:5553185, RGD:13792537 NCBI chr14:20,476,258...20,817,042
Ensembl chr14:20,479,323...20,920,286
JBrowse link
G Slc4a5 solute carrier family 4 member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:114,918,488...115,002,290
Ensembl chr 4:114,918,488...115,002,300
JBrowse link
G Slc4a7 solute carrier family 4 member 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916
JBrowse link
G Slc4a8 solute carrier family 4 member 8 ISO
IBA
IEA
(PMID:11133997), (PMID:18577713)
PMID:21873635
(MGI:MGI:5013899|PMID:21593314)
GO_REF:0000107
RGD
Ensembl
PMID:11133997, PMID:18577713, PMID:21593314, PMID:21873635 GO_REF:0000107, MGI:MGI:5013899, RGD:13792537 NCBI chr 7:142,397,352...142,467,398
Ensembl chr 7:142,397,371...142,464,158
JBrowse link
G Slc4a9 solute carrier family 4 member 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:29,352,596...29,373,603
Ensembl chr18:29,352,749...29,365,595
JBrowse link
G Slc9a1 solute carrier family 9 member A1 IMP
IBA
ISO
ISS
PMID:21873635
(PMID:15035633), (PMID:24840010)
GO_REF:0000024
RGD
UniProt
PMID:15035633, PMID:24840010, PMID:22387884, PMID:21873635 GO_REF:0000024, RGD:6771326, RGD:13792537 NCBI chr 5:151,573,122...151,626,360
Ensembl chr 5:151,573,092...151,627,316
JBrowse link
G Slc9a2 solute carrier family 9 member A2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:47,386,581...47,491,813
Ensembl chr 9:47,386,626...47,491,907
JBrowse link
G Slc9a3 solute carrier family 9 member A3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:31,731,652...31,777,144
Ensembl chr 1:31,734,327...31,777,070
JBrowse link
G Slc9a4 solute carrier family 9 member A4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:47,281,821...47,334,755
Ensembl chr 9:47,281,961...47,328,839
JBrowse link
G Slc9a5 solute carrier family 9 member A5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,304,034...37,325,345
Ensembl chr19:37,305,248...37,325,335
JBrowse link
G Slc9a6 solute carrier family 9 member A6 ISO
IBA
(PMID:30296617)
PMID:21873635
RGD PMID:30296617, PMID:21873635 RGD:13792537 NCBI chr  X:158,979,081...159,045,019
Ensembl chr  X:158,978,755...159,045,044
JBrowse link
G Slc9a7 solute carrier family 9 member A7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:2,434,918...2,615,936
Ensembl chr  X:2,435,305...2,614,770
JBrowse link
G Slc9a8 solute carrier family 9 member A8 ISO
IBA
(MGI:MGI:3529663|PMID:15522866)
PMID:21873635
RGD PMID:15522866, PMID:21873635 MGI:MGI:3529663, RGD:13792537 NCBI chr 3:164,173,045...164,224,747
Ensembl chr 3:164,174,357...164,222,329
JBrowse link
G Slc9a9 solute carrier family 9 member A9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:102,304,095...103,022,619
Ensembl chr 8:102,304,095...103,022,619
JBrowse link
G Slc9b1 solute carrier family 9 member B1 ISO (MGI:MGI:5883207|PMID:20036903) RGD PMID:20036903 MGI:MGI:5883207 NCBI chr 2:240,527,120...240,581,616
Ensembl chr 2:240,527,130...240,576,179
JBrowse link
G Slc9c1 solute carrier family 9 member C1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:60,184,953...60,251,458
Ensembl chr11:60,184,961...60,251,428
JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 ISO (PMID:19893578) RGD PMID:19893578 NCBI chr 3:148,635,822...148,689,961
Ensembl chr 3:148,635,775...148,688,553
JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:16688778 RGD:1598619 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC681325 hypothetical protein LOC681325 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:80,359,555...80,363,168
Ensembl chr  X:80,359,555...80,363,168
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (PMID:22012985) RGD PMID:22012985 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 ISO
IBA
(PMID:31001245)
PMID:21873635
RGD PMID:31001245, PMID:21873635 RGD:13792537 NCBI chr  X:54,390,733...54,409,466
Ensembl chr  X:54,390,733...54,409,466
JBrowse link
G Tmem165 transmembrane protein 165 ISO
ISS
(PMID:23569283)
GO_REF:0000024
RGD
UniProt
PMID:23569283 GO_REF:0000024 NCBI chr14:34,503,037...34,528,262
Ensembl chr14:34,503,038...34,528,262
JBrowse link
G Tmem175 transmembrane protein 175 ISO
ISS
(MGI:MGI:5693670|PMID:26317472)
GO_REF:0000024
RGD
UniProt
PMID:26317472 GO_REF:0000024, MGI:MGI:5693670 NCBI chr14:2,083,745...2,100,006
Ensembl chr14:2,083,712...2,100,005
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes ISO
ISS
(PMID:28013294)
GO_REF:0000024
RGD
UniProt
PMID:28013294 GO_REF:0000024 NCBI chr12:38,459,816...38,482,903
Ensembl chr12:38,459,832...38,484,512
JBrowse link
vacuolar acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:88,914,264...88,967,736
Ensembl chr10:88,914,276...88,967,748
JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:65,736,585...65,821,916
Ensembl chr 4:65,736,585...65,818,521
JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,481,782...37,525,762
Ensembl chr19:37,481,782...37,525,762
JBrowse link
G Atp6v0d2 ATPase H+ transporting V0 subunit D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:33,843,591...33,892,446
Ensembl chr 5:33,843,519...33,892,462
JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 TAS RGD PMID:15013950 RGD:1304309 NCBI chr16:22,326,537...22,350,143
Ensembl chr16:22,326,529...22,350,155
JBrowse link
G Clic4 chloride intracellular channel 4 ISO
IEA
MGI:MGI:3838012 (MGI:MGI:3837628|PMID:19197003)
GO_REF:0000107
RGD
Ensembl
PMID:19197003 GO_REF:0000107, MGI:MGI:3837628 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869
JBrowse link
G Dmxl1 Dmx-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:44,468,762...44,644,769
Ensembl chr18:44,468,784...44,642,050
JBrowse link
G Dmxl2 Dmx-like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,932,575...59,077,788
Ensembl chr 8:58,932,580...59,077,690
JBrowse link
G Rogdi rogdi atypical leucine zipper IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:10,761,477...10,766,096
Ensembl chr10:10,761,477...10,766,095
JBrowse link
G Slc11a1 solute carrier family 11 member 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2446573 (MGI:MGI:3654884|PMID:11067873), (MGI:MGI:3690711|PMID:9670047), (MGI:MGI:3839054|PMID:18984740)
Ensembl
RGD
PMID:9670047, PMID:11067873, PMID:18984740 GO_REF:0000107, MGI:MGI:3654884, MGI:MGI:3690711, MGI:MGI:3839054 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    cellular process 18798
      cellular homeostasis 1035
        cellular chemical homeostasis 949
          cellular ion homeostasis 730
            cellular cation homeostasis 717
              cellular monovalent inorganic cation homeostasis 109
                cellular ammonium homeostasis 1
                cellular potassium ion homeostasis + 15
                cellular sodium ion homeostasis + 24
                regulation of cellular pH + 83
Path 2
Term Annotations click to browse term
  biological_process 20027
    biological regulation 13773
      regulation of biological quality 4280
        homeostatic process 2077
          chemical homeostasis 1334
            ion homeostasis 887
              cellular ion homeostasis 730
                cellular cation homeostasis 717
                  cellular monovalent inorganic cation homeostasis 109
                    cellular ammonium homeostasis 1
                    cellular potassium ion homeostasis + 15
                    cellular sodium ion homeostasis + 24
                    regulation of cellular pH + 83
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.