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ONTOLOGY REPORT - ANNOTATIONS


Term:clathrin coat
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Accession:GO:0030118 term browser browse the term
Definition:A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes.
Synonyms:exact_synonym: clathrin cage
 alt_id: GO:0016190
 xref: NIF_Subcellular:sao879919129;   Wikipedia:Clathrin


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clathrin coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1b1 adaptor related protein complex 1 subunit beta 1 JBrowse link 14 85,230,652 85,281,806 RGD:2306271
G Ap2b1 adaptor related protein complex 2 subunit beta 1 JBrowse link 10 70,516,462 70,621,973 RGD:2306271
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:2303177
RGD:1624291
RGD:2303184
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:2303177
RGD:2303184
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:69810
RGD:1624291
RGD:2303184
RGD:2303177
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:2303173
G Kcnq5 potassium voltage-gated channel subfamily Q member 5 JBrowse link 9 27,565,869 28,141,114 RGD:1624291
G Pank1 pantothenate kinase 1 JBrowse link 1 253,115,400 253,189,643 RGD:1624291
AP-1 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aftph aftiphilin JBrowse link 14 104,921,633 104,975,763 RGD:1624291
RGD:13792537
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 JBrowse link 15 33,759,108 33,767,017 RGD:13792537
G Clba1 clathrin binding box of aftiphilin containing 1 JBrowse link 6 137,386,694 137,393,490 RGD:13792537
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:2317430
RGD:13792537
AP-2 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 JBrowse link 1 100,896,582 100,926,443 RGD:1624291
RGD:13792537
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 JBrowse link 1 214,534,217 214,607,497 RGD:12793054
RGD:13792537
RGD:1624291
RGD:1600115
G Ap2b1 adaptor related protein complex 2 subunit beta 1 JBrowse link 10 70,516,462 70,621,973 RGD:1624291
G Ap2m1 adaptor related protein complex 2 subunit mu 1 JBrowse link 11 84,041,184 84,047,542 RGD:12793054
RGD:13792537
RGD:1624291
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 JBrowse link 1 78,671,238 78,682,847 RGD:727584
RGD:2306270
RGD:1624291
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:13601995
RGD:1624291
RGD:1600115
G Eps15 epidermal growth factor receptor pathway substrate 15 JBrowse link 5 128,923,809 129,022,268 RGD:1624291
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:1624291
RGD:1600115
G Sgip1 SH3GL interacting endocytic adaptor 1 JBrowse link 5 122,300,415 122,498,478 RGD:1600115
RGD:8554282
RGD:1624291
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:2317430
RGD:13792537
G Tbc1d5 TBC1 domain family, member 5 JBrowse link 9 1,144,641 1,747,732 RGD:1624291
clathrin adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1b1 adaptor related protein complex 1 subunit beta 1 JBrowse link 14 85,230,652 85,281,806 RGD:1600115
G Ap1m1 adaptor related protein complex 1 subunit mu 1 JBrowse link 16 19,288,354 19,303,818 RGD:1600115
G Ap1m2 adaptor related protein complex 1 subunit mu 2 JBrowse link 8 22,318,941 22,336,827 RGD:1600115
G Ap2b1 adaptor related protein complex 2 subunit beta 1 JBrowse link 10 70,516,462 70,621,973 RGD:1624291
G Ap2m1 adaptor related protein complex 2 subunit mu 1 JBrowse link 11 84,041,184 84,047,542 RGD:1600115
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:1600115
G Ap3m1 adaptor related protein complex 3 subunit mu 1 JBrowse link 15 3,435,998 3,454,281 RGD:1600115
G Ap3m2 adaptor related protein complex 3 subunit mu 2 JBrowse link 16 74,075,842 74,091,230 RGD:1600115
G Ap4b1 adaptor related protein complex 4 subunit beta 1 JBrowse link 2 206,293,679 206,305,705 RGD:1600115
G Ap4m1 adaptor related protein complex 4 subunit mu 1 JBrowse link 12 19,314,222 19,320,339 RGD:1600115
G Lrrn3 leucine rich repeat neuronal 3 JBrowse link 6 61,374,328 61,405,195 RGD:727577
clathrin coat of coated pit term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:70686
RGD:1600115
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:70686
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1600115
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:1624291
G Eps15 epidermal growth factor receptor pathway substrate 15 JBrowse link 5 128,923,809 129,022,268 RGD:1624291
RGD:13792537
G Eps15l1 epidermal growth factor receptor pathway substrate 15-like 1 JBrowse link 16 19,127,635 19,202,991 RGD:1624291
RGD:13792537
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:1624291
G Reps1 RALBP1 associated Eps domain containing 1 JBrowse link 1 13,262,049 13,298,347 RGD:13792537
G Reps2 RALBP1 associated Eps domain containing 2 JBrowse link X 33,786,611 34,062,941 RGD:13792537
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:11059574
clathrin coat of endocytic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epn2 epsin 2 JBrowse link 10 47,795,496 47,857,373 RGD:708327
RGD:1600115
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:1600115
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:1600115
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1600115
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:11535088
G Synrg synergin, gamma JBrowse link 10 71,278,698 71,357,791 RGD:631945
RGD:13792537
clathrin complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aak1 AP2 associated kinase 1 JBrowse link 4 118,653,851 118,806,796 RGD:8553925
G Baiap2l2 BAI1-associated protein 2-like 2 JBrowse link 7 120,492,366 120,518,803 RGD:1624291
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:1624291
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1624291
RGD:13792537
RGD:1600115
G Sclt1 sodium channel and clathrin linker 1 JBrowse link 2 128,523,376 128,675,668 RGD:1359053
G Scn10a sodium voltage-gated channel alpha subunit 10 JBrowse link 8 128,298,593 128,416,896 RGD:1359053
G Vps33a VPS33A core subunit of CORVET and HOPS complexes JBrowse link 12 38,459,816 38,482,903 RGD:1624291
G Vps41 VPS41 subunit of HOPS complex JBrowse link 17 48,643,754 48,810,633 RGD:1624291
clathrin vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clint1 clathrin interactor 1 JBrowse link 10 30,833,914 31,007,813 RGD:13792537
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:70686
RGD:13792537
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:70686
RGD:13792537
G Enthd1 ENTH domain containing 1 JBrowse link 7 121,668,857 121,784,530 RGD:13792537
G Epn1 Epsin 1 JBrowse link 1 72,294,153 72,310,217 RGD:13792537
G Epn2 epsin 2 JBrowse link 10 47,795,496 47,857,373 RGD:13792537
G Epn3 epsin 3 JBrowse link 10 82,220,762 82,231,200 RGD:13792537
G Necap1 NECAP endocytosis associated 1 JBrowse link 4 155,709,712 155,724,801 RGD:1624291
RGD:13792537
G Necap2 NECAP endocytosis associated 2 JBrowse link 5 159,589,856 159,602,260 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19949
    intracellular 13934
      cytoplasm 10686
        membrane coat 101
          clathrin coat 49
            clathrin adaptor complex + 23
            clathrin coat of coated pit + 19
            clathrin complex 8
            clathrin vesicle coat + 26
Path 2
Term Annotations click to browse term
  cellular_component 19949
    cellular anatomical entity 19598
      membrane 9984
        coated membrane 101
          membrane coat 101
            clathrin coat 49
              clathrin adaptor complex + 23
              clathrin coat of coated pit + 19
              clathrin complex 8
              clathrin vesicle coat + 26
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.