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ONTOLOGY REPORT - ANNOTATIONS


Term:B cell differentiation
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Accession:GO:0030183 term browser browse the term
Definition:The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:exact_synonym: B lymphocyte differentiation
 related_synonym: B cell development
 alt_id: GO:0042115


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B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 ISO (MGI:MGI:3828349|PMID:17371977) BHF-UCL PMID:17371977 MGI:MGI:3828349 NCBI chrNW_004955487:5,180,241...5,218,298
Ensembl chrNW_004955487:5,180,252...5,218,216
JBrowse link
G Adgrg3 adhesion G protein-coupled receptor G3 ISO (MGI:MGI:5645196|PMID:24113187) UniProtKB PMID:24113187 MGI:MGI:5645196 NCBI chrNW_004955433:15,290,538...15,317,020
Ensembl chrNW_004955433:15,290,394...15,319,361
JBrowse link
G Bcl11a BAF chromatin remodeling complex subunit BCL11A ISO (MGI:MGI:2662805|PMID:12717432) MGI PMID:12717432 MGI:MGI:2662805 NCBI chrNW_004955424:23,233,523...23,330,679
Ensembl chrNW_004955424:23,233,523...23,330,679
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:2156164|PMID:8170972), (MGI:MGI:85476|PMID:9028316) MGI PMID:8170972, PMID:9028316 MGI:MGI:2156164, MGI:MGI:85476 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bcl6 BCL6 transcription repressor ISO (MGI:MGI:3028360|PMID:14647274) MGI PMID:14647274 MGI:MGI:3028360 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259
JBrowse link
G Card11 caspase recruitment domain family member 11 ISO (MGI:MGI:2664641|PMID:12818158) MGI PMID:12818158 MGI:MGI:2664641 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041
JBrowse link
G Cd40lg CD40 ligand ISO (MGI:MGI:3028360|PMID:14647274) MGI PMID:14647274 MGI:MGI:3028360 NCBI chrNW_004955489:8,465,571...8,477,714
Ensembl chrNW_004955489:8,465,164...8,477,746
JBrowse link
G Cd79a CD79a molecule ISO (MGI:MGI:2149180|PMID:11514602), (MGI:MGI:2687348|PMID:12097390) UniProtKB PMID:11514602, PMID:12097390 MGI:MGI:2149180, MGI:MGI:2687348 NCBI chrNW_004955555:961,522...965,605
Ensembl chrNW_004955555:961,522...965,605
JBrowse link
G Cdh17 cadherin 17 ISO (MGI:MGI:3531365|PMID:15688343) UniProtKB PMID:15688343 MGI:MGI:3531365 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128
JBrowse link
G Cebpg CCAAT enhancer binding protein gamma ISO (PMID:1431100) UniProtKB PMID:1431100 NCBI chrNW_004955468:3,137,106...3,141,733
Ensembl chrNW_004955468:3,137,106...3,141,733
JBrowse link
G Clcf1 cardiotrophin like cytokine factor 1 ISO (MGI:MGI:1346205|PMID:10500198) MGI PMID:10500198 MGI:MGI:1346205 NCBI chrNW_004955422:18,097,779...18,108,628
Ensembl chrNW_004955422:18,097,779...18,108,628
JBrowse link
G Cr2 complement C3d receptor 2 ISO (PMID:2995485) UniProtKB PMID:2995485 NCBI chrNW_004955406:42,877,041...42,910,970
Ensembl chrNW_004955406:42,876,966...42,911,564
JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 ISO (MGI:MGI:5314150|PMID:22157821) UniProtKB PMID:22157821 MGI:MGI:5314150 NCBI chrNW_004955532:3,085,386...3,153,952
Ensembl chrNW_004955532:3,085,386...3,154,671
JBrowse link
G Dclre1c DNA cross-link repair 1C ISO (MGI:MGI:2447929|PMID:12504013) MGI PMID:12504013 MGI:MGI:2447929 NCBI chrNW_004955429:19,461,446...19,501,908
Ensembl chrNW_004955429:19,461,528...19,505,321
JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 ISO (MGI:MGI:5644772|PMID:25222125) UniProtKB PMID:25222125 MGI:MGI:5644772 NCBI chrNW_004955410:12,814,993...12,820,852
Ensembl chrNW_004955410:12,814,479...12,822,777
JBrowse link
G Ep300 E1A binding protein p300 ISO (MGI:MGI:3812266|PMID:18684867) MGI PMID:18684867 MGI:MGI:3812266 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO (MGI:MGI:5484711|PMID:23531880) MGI PMID:23531880 MGI:MGI:5484711 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235
JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 ISO (MGI:MGI:4946600|PMID:21228325) UniProtKB PMID:21228325 MGI:MGI:4946600 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439
JBrowse link
G Fzd9 frizzled class receptor 9 ISO (MGI:MGI:3577530|PMID:15572594) MGI PMID:15572594 MGI:MGI:3577530 NCBI chrNW_004955456:14,245,994...14,247,551
Ensembl chrNW_004955456:14,246,324...14,247,550
JBrowse link
G Gon4l gon-4 like ISO (MGI:MGI:4821908|PMID:20530203) MGI PMID:20530203 MGI:MGI:4821908 NCBI chrNW_004955545:1,990,202...2,054,614 JBrowse link
G Gps2 G protein pathway suppressor 2 ISO (MGI:MGI:5896692|PMID:28039360) UniProtKB PMID:28039360 MGI:MGI:5896692 NCBI chrNW_004955467:9,600,829...9,604,148
Ensembl chrNW_004955467:9,600,829...9,603,606
JBrowse link
G Hhex hematopoietically expressed homeobox ISO (MGI:MGI:2449266|PMID:12522149) MGI PMID:12522149 MGI:MGI:2449266 NCBI chrNW_004955425:737,506...742,775
Ensembl chrNW_004955425:735,378...742,775
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:MGI:5449477|PMID:23071339)
(MGI:MGI:68746|PMID:7923373)
MGI PMID:7923373, PMID:23071339 MGI:MGI:5449477, MGI:MGI:68746 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791
JBrowse link
G Jak3 Janus kinase 3 ISO (MGI:MGI:3655405|PMID:9498750) BHF-UCL PMID:9498750 MGI:MGI:3655405 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643
JBrowse link
G Lyl1 LYL1 basic helix-loop-helix family member ISO (MGI:MGI:3693935|PMID:16514064) UniProtKB PMID:16514064 MGI:MGI:3693935 NCBI chrNW_004955415:32,121,808...32,124,730
Ensembl chrNW_004955415:32,121,808...32,124,730
JBrowse link
G Ms4a1 membrane spanning 4-domains A1 ISO (PMID:3925015) UniProt PMID:3925015 NCBI chrNW_004955511:5,252,934...5,263,961
Ensembl chrNW_004955511:5,258,341...5,267,113
JBrowse link
G Msh2 mutS homolog 2 ISO (MGI:MGI:1275867|PMID:9697843) MGI PMID:9697843 MGI:MGI:1275867 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698
JBrowse link
G Myb MYB proto-oncogene, transcription factor ISO (MGI:MGI:3763573|PMID:17927961) MGI PMID:17927961 MGI:MGI:3763573 NCBI chrNW_004955439:1,523,516...1,560,185
Ensembl chrNW_004955439:1,521,292...1,560,220
JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 ISO (MGI:MGI:3044463|PMID:15143214) HGNC PMID:15143214 MGI:MGI:3044463 NCBI chrNW_004955413:27,865,672...27,893,793
Ensembl chrNW_004955413:27,866,271...27,893,844
JBrowse link
G Nhej1 non-homologous end joining factor 1 ISO (PMID:16439204) UniProtKB PMID:16439204 NCBI chrNW_004955453:14,278,773...14,362,167
Ensembl chrNW_004955453:14,281,069...14,363,876
JBrowse link
G Nkx2-3 NK2 homeobox 3 ISO (MGI:MGI:2654966|PMID:12682228) MGI PMID:12682228 MGI:MGI:2654966 NCBI chrNW_004955507:5,454,871...5,457,247
Ensembl chrNW_004955507:5,455,087...5,457,660
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO (MGI:MGI:3487180|PMID:15459109) MGI PMID:15459109 MGI:MGI:3487180 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579
JBrowse link
G Onecut1 one cut homeobox 1 ISO (MGI:MGI:3707632|PMID:12874218) MGI PMID:12874218 MGI:MGI:3707632 NCBI chrNW_004955409:2,181,364...2,214,636
Ensembl chrNW_004955409:2,181,346...2,207,888
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO (MGI:MGI:1329776|PMID:9988280) MGI PMID:9988280 MGI:MGI:1329776 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820
JBrowse link
G Plcg2 phospholipase C gamma 2 ISO (MGI:MGI:1861532|PMID:10925250) UniProtKB PMID:10925250 MGI:MGI:1861532 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Polm DNA polymerase mu ISO (MGI:MGI:3576407|PMID:15789338) MGI PMID:15789338 MGI:MGI:3576407 NCBI chrNW_004955456:7,886,182...7,893,800
Ensembl chrNW_004955456:7,886,291...7,895,085
JBrowse link
G Pou1f1 POU class 1 homeobox 1 ISO (MGI:MGI:3640879|PMID:9300691) MGI PMID:9300691 MGI:MGI:3640879 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 ISO (MGI:MGI:1096020|PMID:9271584) UniProtKB PMID:9271584 MGI:MGI:1096020 NCBI chrNW_004955402:771,410...846,671 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C ISO (MGI:MGI:3521537|PMID:15557316), (MGI:MGI:3774343|PMID:18249142)
(MGI:MGI:2670259|PMID:12902479), (MGI:MGI:80946|PMID:8666928)
(MGI:MGI:1095647|PMID:9254656)
ARUK-UCL
MGI
PMID:8666928, PMID:9254656, PMID:12902479, PMID:15557316, PMID:18249142 MGI:MGI:1095647, MGI:MGI:2670259, MGI:MGI:3521537, MGI:MGI:3774343, MGI:MGI:80946 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552
JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J ISO (MGI:MGI:3774343|PMID:18249142) ARUK-UCL PMID:18249142 MGI:MGI:3774343 NCBI chrNW_004955422:396,266...438,792
Ensembl chrNW_004955422:399,357...443,054
JBrowse link
G Rabl3 RAB, member of RAS oncogene family like 3 ISO (MGI:MGI:6405642|PMID:32220963) UniProt PMID:32220963 MGI:MGI:6405642 NCBI chrNW_004955427:20,204,901...20,242,242
Ensembl chrNW_004955427:20,204,901...20,242,242
JBrowse link
G Rag1 recombination activating 1 ISO (MGI:MGI:50458|PMID:1547488)
(MGI:MGI:2178701|PMID:11976687)
UniProtKB
MGI
PMID:1547488, PMID:11976687 MGI:MGI:2178701, MGI:MGI:50458 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504
JBrowse link
G Rag2 recombination activating 2 ISO (MGI:MGI:50458|PMID:1547488), (MGI:MGI:50459|PMID:1547487)
(MGI:MGI:2179579|PMID:11980719), (MGI:MGI:3709144|PMID:14595002)
UniProtKB
MGI
PMID:1547487, PMID:1547488, PMID:11980719, PMID:14595002 MGI:MGI:2179579, MGI:MGI:3709144, MGI:MGI:50458, MGI:MGI:50459 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:2178898|PMID:11967543) MGI PMID:11967543 MGI:MGI:2178898 NCBI chrNW_004955443:18,783,061...19,029,441
Ensembl chrNW_004955443:18,783,061...18,910,228
JBrowse link
G Sp3 Sp3 transcription factor ISO (MGI:MGI:2670314|PMID:12676787) MGI PMID:12676787 MGI:MGI:2670314 NCBI chrNW_004955449:1,347,781...1,404,368 JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:MGI:3055645|PMID:15284856), (MGI:MGI:3655025|PMID:16797412)
(MGI:MGI:3054344|PMID:15294947)
MGI PMID:15284856, PMID:15294947, PMID:16797412 MGI:MGI:3054344, MGI:MGI:3055645, MGI:MGI:3655025 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003
JBrowse link
G Tpd52 tumor protein D52 ISO (PMID:15576473) UniProtKB PMID:15576473 NCBI chrNW_004955444:1,230,730...1,261,839 JBrowse link
G Tshr thyroid stimulating hormone receptor ISO (MGI:MGI:3640879|PMID:9300691) MGI PMID:9300691 MGI:MGI:3640879 NCBI chrNW_004955438:4,601,765...4,758,922
Ensembl chrNW_004955438:4,614,584...4,761,582
JBrowse link
G Yy1 YY1 transcription factor ISO (MGI:MGI:5484711|PMID:23531880) MGI PMID:23531880 MGI:MGI:5484711 NCBI chrNW_004955438:21,341,374...21,377,674 JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 ISO (MGI:MGI:5300225|PMID:22201126) MGI PMID:22201126 MGI:MGI:5300225 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A ISO (MGI:MGI:3710692|PMID:17495164) UniProt PMID:17495164 MGI:MGI:3710692 NCBI chrNW_004955495:4,747,905...4,754,066
Ensembl chrNW_004955495:4,740,901...4,753,992
JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase ISO (MGI:MGI:65977|PMID:7680896) MGI PMID:7680896 MGI:MGI:65977 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120
JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:78866|PMID:8788039) MGI PMID:8788039 MGI:MGI:78866 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO (MGI:MGI:78866|PMID:8788039) MGI PMID:8788039 MGI:MGI:78866 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Rag2 recombination activating 2 ISO (MGI:MGI:78866|PMID:8788039) MGI PMID:8788039 MGI:MGI:78866 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732
JBrowse link
G Tcf3 transcription factor 3 ISO (PMID:15030778) UniProtKB PMID:15030778 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:78866|PMID:8788039) MGI PMID:8788039 MGI:MGI:78866 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
B cell negative selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2 antagonist/killer 1 ISO (MGI:MGI:3588597|PMID:16055554) MGI PMID:16055554 MGI:MGI:3588597 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:MGI:3588597|PMID:16055554) MGI PMID:16055554 MGI:MGI:3588597 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
B-1 B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd19 CD19 molecule ISO (MGI:MGI:74944|PMID:7543183) UniProt PMID:7543183 MGI:MGI:74944 NCBI chrNW_004955493:6,540,160...6,544,077 JBrowse link
G Malt1 MALT1 paracaspase ISO (MGI:MGI:3629264|PMID:14614861) MGI PMID:14614861 MGI:MGI:3629264 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429
JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slamf8 SLAM family member 8 ISO (MGI:MGI:6215454|PMID:11313408) UniProt PMID:11313408 MGI:MGI:6215454 NCBI chrNW_004955468:11,623,092...11,632,566
Ensembl chrNW_004955468:11,623,197...11,632,573
JBrowse link
B-1a B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtm7 CKLF like MARVEL transmembrane domain containing 7 ISO (MGI:MGI:5554324|PMID:24080084) MGI PMID:24080084 MGI:MGI:5554324 NCBI chrNW_004955430:23,752,910...23,803,754
Ensembl chrNW_004955430:23,752,919...23,807,141
JBrowse link
G Nfatc1 nuclear factor of activated T cells 1 ISO (MGI:MGI:2680742|PMID:14595020) MGI PMID:14595020 MGI:MGI:2680742 NCBI chrNW_004955402:62,558,392...62,674,347
Ensembl chrNW_004955402:62,558,286...62,674,457
JBrowse link
G Plcl2 phospholipase C like 2 ISO (MGI:MGI:2677607|PMID:14517301) MGI PMID:14517301 MGI:MGI:2677607 NCBI chrNW_004955430:9,157,074...9,347,366
Ensembl chrNW_004955430:9,157,074...9,348,563
JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg2 phospholipase C gamma 2 ISO (MGI:MGI:2679743|PMID:12928432) MGI PMID:12928432 MGI:MGI:2679743 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO (MGI:MGI:3619310|PMID:14607964) MGI PMID:14607964 MGI:MGI:3619310 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Cdh17 cadherin 17 ISO (MGI:MGI:3531365|PMID:15688343) UniProtKB PMID:15688343 MGI:MGI:3531365 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128
JBrowse link
G Il21 interleukin 21 ISO (MGI:MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:MGI:5450752 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492
JBrowse link
G Il6 interleukin 6 ISO (MGI:MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:MGI:5450752 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO (MGI:MGI:5547463|PMID:23997217) MGI PMID:23997217 MGI:MGI:5547463 NCBI chrNW_004955429:18,356,642...18,372,928
Ensembl chrNW_004955429:18,356,642...18,372,928
JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 ISO (MGI:MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:MGI:5450752 NCBI chrNW_004955412:13,131,229...13,167,150
Ensembl chrNW_004955412:13,131,168...13,156,128
JBrowse link
immature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fnip1 folliculin interacting protein 1 ISO (MGI:MGI:5436190|PMID:22608497) MGI PMID:22608497 MGI:MGI:5436190 NCBI chrNW_004955408:3,117,258...3,238,223
Ensembl chrNW_004955408:3,117,277...3,238,223
JBrowse link
G Irf2bp2 interferon regulatory factor 2 binding protein 2 ISO (PMID:27016798) UniProtKB PMID:27016798 NCBI chrNW_004955492:4,889,878...4,895,508
Ensembl chrNW_004955492:4,889,878...4,894,325
JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO (MGI:MGI:3040777|PMID:15067126) UniProtKB PMID:15067126 MGI:MGI:3040777 NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734
JBrowse link
G Syvn1 synoviolin 1 ISO (MGI:MGI:6220623|PMID:29907570) UniProt PMID:29907570 MGI:MGI:6220623 NCBI chrNW_004955422:20,067,933...20,074,947
Ensembl chrNW_004955422:20,068,848...20,073,850
JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3 transcription coactivator ISO (MGI:MGI:85481|PMID:9009202) MGI PMID:9009202 MGI:MGI:85481 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466
JBrowse link
G Cdh17 cadherin 17 ISO (MGI:MGI:3531365|PMID:15688343) UniProtKB PMID:15688343 MGI:MGI:3531365 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128
JBrowse link
G Dll1 delta like canonical Notch ligand 1 ISO (MGI:MGI:3044313|PMID:15146182), (MGI:MGI:3838059|PMID:19217325) UniProtKB PMID:15146182, PMID:19217325 MGI:MGI:3044313, MGI:MGI:3838059 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Dock10 dedicator of cytokinesis 10 ISO (MGI:MGI:5818419|PMID:25729399) UniProtKB PMID:25729399 MGI:MGI:5818419 NCBI chrNW_004955453:9,229,535...9,424,570
Ensembl chrNW_004955453:9,264,666...9,424,570
JBrowse link
G Dock11 dedicator of cytokinesis 11 ISO (MGI:MGI:5818419|PMID:25729399) UniProtKB PMID:25729399 MGI:MGI:5818419 NCBI chrNW_004955534:1,239,241...1,431,714
Ensembl chrNW_004955534:1,239,247...1,431,714
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:3838059|PMID:19217325) UniProtKB PMID:19217325 MGI:MGI:3838059 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512
JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:3838059|PMID:19217325) UniProtKB PMID:19217325 MGI:MGI:3838059 NCBI chrNW_004955413:23,901,987...23,917,720
Ensembl chrNW_004955413:23,902,707...23,917,542
JBrowse link
G Notch2 notch receptor 2 ISO (MGI:MGI:3838059|PMID:19217325) UniProtKB PMID:19217325 MGI:MGI:3838059 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO (MGI:MGI:1860716|PMID:10881171) UniProtKB PMID:10881171 MGI:MGI:1860716 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
mature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou2f2 POU class 2 homeobox 2 ISO (MGI:MGI:53043|PMID:8096198) MGI PMID:8096198 MGI:MGI:53043 NCBI chrNW_004955555:759,308...793,500
Ensembl chrNW_004955555:759,308...793,485
JBrowse link
mature B cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr183 G protein-coupled receptor 183 ISO (MGI:MGI:4352759|PMID:19597478) UniProtKB PMID:19597478 MGI:MGI:4352759 NCBI chrNW_004955404:11,264,954...11,277,531
Ensembl chrNW_004955404:11,264,954...11,277,531
JBrowse link
G LOC102026773 chromosome unknown open reading frame, human C17orf99 ISO (MGI:MGI:6103709|PMID:28978694) UniProtKB PMID:28978694 MGI:MGI:6103709 NCBI chrNW_004955506:4,397,221...4,408,645 JBrowse link
memory B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (MGI:MGI:2387354|PMID:10755614) UniProt PMID:10755614 MGI:MGI:2387354 NCBI chrNW_004955461:7,960,901...8,036,221
Ensembl chrNW_004955461:7,960,690...7,976,183
JBrowse link
negative regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 fms related receptor tyrosine kinase 3 ISO (MGI:MGI:3623701|PMID:16618805) MGI PMID:16618805 MGI:MGI:3623701 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439
JBrowse link
G Hmgb3 high mobility group box 3 ISO (MGI:MGI:2670545|PMID:12714519) MGI PMID:12714519 MGI:MGI:2670545 NCBI chrNW_004955498:6,633,540...6,640,393 JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3805135|PMID:18523151) MGI PMID:18523151 MGI:MGI:3805135 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Sfrp1 secreted frizzled related protein 1 ISO (PMID:18941195)
(MGI:MGI:3814493|PMID:18941195)
UniProtKB PMID:18941195 MGI:MGI:3814493 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itm2a integral membrane protein 2A ISO (MGI:MGI:5613782|PMID:24831988) MGI PMID:24831988 MGI:MGI:5613782 NCBI chrNW_004955557:2,235,223...2,243,911
Ensembl chrNW_004955557:2,235,223...2,243,927
JBrowse link
G Lgals1 galectin 1 ISO (MGI:MGI:5301217|PMID:21753146) MGI PMID:21753146 MGI:MGI:5301217 NCBI chrNW_004955413:24,072,086...24,075,452
Ensembl chrNW_004955413:24,072,086...24,075,452
JBrowse link
G Lgals8 galectin 8 ISO (MGI:MGI:5301217|PMID:21753146) MGI PMID:21753146 MGI:MGI:5301217 NCBI chrNW_004955492:3,673,233...3,693,777
Ensembl chrNW_004955492:3,673,233...3,693,776
JBrowse link
G Nkx2-3 NK2 homeobox 3 ISO (MGI:MGI:1888604|PMID:10926756) MGI PMID:10926756 MGI:MGI:1888604 NCBI chrNW_004955507:5,454,871...5,457,247
Ensembl chrNW_004955507:5,455,087...5,457,660
JBrowse link
positive regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C ISO (MGI:MGI:5002406|PMID:21423173) UniProtKB PMID:21423173 MGI:MGI:5002406 NCBI chrNW_004955489:5,394,553...5,567,295
Ensembl chrNW_004955489:5,394,357...5,567,405
JBrowse link
G Bad BCL2 associated agonist of cell death ISO (MGI:MGI:3029504|PMID:12431371) MGI PMID:12431371 MGI:MGI:3029504 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Il2rg interleukin 2 receptor subunit gamma ISO (MGI:MGI:1095961|PMID:9252128) MGI PMID:9252128 MGI:MGI:1095961 NCBI chrNW_004955475:10,676,592...10,680,565 JBrowse link
G Il7 interleukin 7 ISO (MGI:MGI:3655025|PMID:16797412) MGI PMID:16797412 MGI:MGI:3655025 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D ISO (MGI:MGI:1266928|PMID:9620849), (MGI:MGI:1354084|PMID:10704460) MGI PMID:9620849, PMID:10704460 MGI:MGI:1266928, MGI:MGI:1354084 NCBI chrNW_004955453:2,938,659...3,037,211
Ensembl chrNW_004955453:2,938,659...3,037,211
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO (MGI:MGI:5013661|PMID:21572390) UniProtKB PMID:21572390 MGI:MGI:5013661 NCBI chrNW_004955409:37,438,924...37,448,704
Ensembl chrNW_004955409:37,440,541...37,448,437
JBrowse link
G Nckap1l NCK associated protein 1 like ISO (MGI:MGI:3818191|PMID:19015308) UniProtKB PMID:19015308 MGI:MGI:3818191 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182
JBrowse link
G Pcid2 PCI domain containing 2 ISO (MGI:MGI:4839685|PMID:20870947) UniProtKB PMID:20870947 MGI:MGI:4839685 NCBI chrNW_004955404:618,092...639,424
Ensembl chrNW_004955404:618,092...639,704
JBrowse link
G Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma ISO (MGI:MGI:3589325|PMID:16129705) MGI PMID:16129705 MGI:MGI:3589325 NCBI chrNW_004955409:25,920,973...25,943,985 JBrowse link
G Prdm1 PR/SET domain 1 NOT ISO (MGI:MGI:3826899|PMID:18845144) MGI PMID:18845144 MGI:MGI:3826899 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056
JBrowse link
G Stat5a signal transducer and activator of transcription 5A ISO (MGI:MGI:1889695|PMID:10979977) MGI PMID:10979977 MGI:MGI:1889695 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B ISO (MGI:MGI:1889695|PMID:10979977) MGI PMID:10979977 MGI:MGI:1889695 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Syk spleen associated tyrosine kinase ISO (PMID:18369315)
(MGI:MGI:77314|PMID:7477352)
(MGI:MGI:77315|PMID:7477353)
CACAO
MGI
PMID:7477352, PMID:7477353, PMID:18369315 MGI:MGI:77314, MGI:MGI:77315 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581
JBrowse link
G Xbp1 X-box binding protein 1 ISO (PMID:11460154) UniProtKB PMID:11460154 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
JBrowse link
G Il2 interleukin 2 ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265
JBrowse link
G Xbp1 X-box binding protein 1 ISO (PMID:11460154) UniProtKB PMID:11460154 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
pre-B cell allelic exclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO (MGI:MGI:3848557|PMID:19448632) UniProtKB PMID:19448632 MGI:MGI:3848557 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Rag1 recombination activating 1 ISO (MGI:MGI:3848557|PMID:19448632) UniProtKB PMID:19448632 MGI:MGI:3848557 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504
JBrowse link
G Rag2 recombination activating 2 ISO (MGI:MGI:3848557|PMID:19448632) UniProtKB PMID:19448632 MGI:MGI:3848557 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732
JBrowse link
pre-B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C ISO (MGI:MGI:5002406|PMID:21423173) UniProtKB PMID:21423173 MGI:MGI:5002406 NCBI chrNW_004955489:5,394,553...5,567,295
Ensembl chrNW_004955489:5,394,357...5,567,405
JBrowse link
G Cd24 CD24 molecule ISO (MGI:MGI:2179980|PMID:9028339), (MGI:MGI:74794|PMID:7795661) MGI PMID:7795661, PMID:9028339 MGI:MGI:2179980, MGI:MGI:74794 NCBI chrNW_004955411:32,270,881...32,275,236 JBrowse link
G Foxp1 forkhead box P1 ISO (MGI:MGI:3662963|PMID:16819554) MGI PMID:16819554 MGI:MGI:3662963 NCBI chrNW_004955421:16,595,445...17,075,923 JBrowse link
regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT ISO (MGI:MGI:5800654|PMID:27010503) UniProtKB PMID:27010503 MGI:MGI:5800654 NCBI chrNW_004955524:933,200...936,933 JBrowse link
G Card11 caspase recruitment domain family member 11 ISO (MGI:MGI:3039643|PMID:12867038) MGI PMID:12867038 MGI:MGI:3039643 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041
JBrowse link
G Cd24 CD24 molecule ISO (MGI:MGI:2179980|PMID:9028339), (MGI:MGI:74794|PMID:7795661) MGI PMID:7795661, PMID:9028339 MGI:MGI:2179980, MGI:MGI:74794 NCBI chrNW_004955411:32,270,881...32,275,236 JBrowse link
G Cyld CYLD lysine 63 deubiquitinase ISO (MGI:MGI:3656194|PMID:16501569) MGI PMID:16501569 MGI:MGI:3656194 NCBI chrNW_004955433:8,788,867...8,845,925
Ensembl chrNW_004955433:8,788,655...8,845,925
JBrowse link
G Ikzf3 IKAROS family zinc finger 3 ISO (MGI:MGI:1307021|PMID:9806640) UniProtKB PMID:9806640 MGI:MGI:1307021 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916
JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 ISO (MGI:MGI:3044463|PMID:15143214) MGI PMID:15143214 MGI:MGI:3044463 NCBI chrNW_004955413:27,865,672...27,893,793
Ensembl chrNW_004955413:27,866,271...27,893,844
JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 ISO (MGI:MGI:1095647|PMID:9254656) MGI PMID:9254656 MGI:MGI:1095647 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177
JBrowse link
G Slamf8 SLAM family member 8 ISO (MGI:MGI:6215454|PMID:11313408) UniProt PMID:11313408 MGI:MGI:6215454 NCBI chrNW_004955468:11,623,092...11,632,566
Ensembl chrNW_004955468:11,623,197...11,632,573
JBrowse link
G Tlr9 toll like receptor 9 ISO (PMID:23857366) UniProtKB PMID:23857366 NCBI chrNW_004955532:3,828,645...3,832,699 JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 ISO (MGI:MGI:5779430|PMID:27102483) UniProtKB PMID:27102483 MGI:MGI:5779430 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617
JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 ISO (MGI:MGI:5779430|PMID:27102483) UniProtKB PMID:27102483 MGI:MGI:5779430 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
transitional one stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:MGI:3839222|PMID:19228876) MGI PMID:19228876 MGI:MGI:3839222 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    immune system process 1909
      leukocyte activation 798
        lymphocyte activation 648
          lymphocyte differentiation 350
            B cell differentiation 117
              B cell lineage commitment + 6
              B cell selection + 3
              immature B cell differentiation + 11
              mature B cell differentiation + 32
              negative regulation of B cell differentiation + 4
              positive regulation of B cell differentiation + 16
              regulation of B cell differentiation + 31
Path 2
Term Annotations click to browse term
  biological_process 11892
    developmental process 5616
      anatomical structure development 5254
        multicellular organism development 4812
          system development 4532
            immune system development 924
              hematopoietic or lymphoid organ development 866
                hemopoiesis 820
                  leukocyte differentiation 517
                    lymphocyte differentiation 350
                      B cell differentiation 117
                        B cell lineage commitment + 6
                        B cell selection + 3
                        immature B cell differentiation + 11
                        mature B cell differentiation + 32
                        negative regulation of B cell differentiation + 4
                        positive regulation of B cell differentiation + 16
                        regulation of B cell differentiation + 31
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.