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ONTOLOGY REPORT - ANNOTATIONS


Term:extracellular matrix organization
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Accession:GO:0030198 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.
Synonyms:exact_synonym: extracellular matrix organisation
 related_synonym: extracellular matrix organization and biogenesis


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extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936630:2,286,089...2,518,588 JBrowse link
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 ISO (MGI:3778519|PMID:18454205) MGI PMID:18454205 MGI:3778519 NCBI chrNW_004936512:1,942,902...2,088,122 JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 ISO (MGI:4452308|PMID:20096780) BHF-UCL PMID:20096780 MGI:4452308 NCBI chrNW_004936637:1,787,987...1,946,250 JBrowse link
G Adamtsl2 ADAMTS like 2 ISO (MGI:5638958|PMID:25762570) MGI PMID:25762570 MGI:5638958 NCBI chrNW_004936669:3,363,991...3,397,099 JBrowse link
G Adamtsl4 ADAMTS like 4 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936580:782,146...791,388 JBrowse link
G Agt angiotensinogen ISO (MGI:2385816|PMID:9734405) MGI PMID:9734405 MGI:2385816 NCBI chrNW_004936484:19,713,299...19,721,144 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 ISO (MGI:3614238|PMID:16407979) MGI PMID:16407979 MGI:3614238 NCBI chrNW_004936842:452,682...476,533 JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 ISO (MGI:3614238|PMID:16407979) MGI PMID:16407979 MGI:3614238 NCBI chrNW_004936482:8,166,380...8,489,489 JBrowse link
G Aplp1 amyloid beta precursor like protein 1 ISO (MGI:3056838|PMID:15385965) MGI PMID:15385965 MGI:3056838 NCBI chrNW_004936570:475,446...484,379 JBrowse link
G Aplp2 amyloid beta precursor like protein 2 ISO (MGI:3056838|PMID:15385965) MGI PMID:15385965 MGI:3056838 NCBI chrNW_004936572:2,205,527...2,277,786 JBrowse link
G App amyloid beta precursor protein ISO (MGI:3056838|PMID:15385965) MGI PMID:15385965 MGI:3056838 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Atp7a ATPase copper transporting alpha ISO (MGI:53994|PMID:1115218) MGI PMID:1115218 MGI:53994 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Atxn1l ataxin 1 like ISO (MGI:5298126|PMID:22014525) MGI PMID:22014525 MGI:5298126 NCBI chrNW_004936475:21,941,682...21,953,071 JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 ISO (MGI:2178150|PMID:11900463)
(MGI:84206|PMID:8787759)
MGI PMID:8787759 PMID:11900463 MGI:2178150 MGI:84206 NCBI chrNW_004936524:1,659,791...1,713,971 JBrowse link
G Bcl3 BCL3 transcription coactivator ISO (MGI:3655550|PMID:10586052) MGI PMID:10586052 MGI:3655550 NCBI chrNW_004936706:1,410,848...1,427,822 JBrowse link
G Ccdc80 coiled-coil domain containing 80 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936536:294,650...330,875 JBrowse link
G Ccn1 cellular communication network factor 1 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936608:152,174...155,123 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain ISO (MGI:3054601|PMID:15254016) MGI PMID:15254016 MGI:3054601 NCBI chrNW_004936778:847,473...943,038 JBrowse link
G Col19a1 collagen type XIX alpha 1 chain ISO (MGI:3053247|PMID:15302855) MGI PMID:15302855 MGI:3053247 NCBI chrNW_004936618:1,856,473...2,169,869 JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain ISO (MGI:5315238|PMID:22206015) MGI PMID:22206015 MGI:5315238 NCBI chrNW_004936487:3,487,776...3,601,779 JBrowse link
G Col4a6 collagen type IV alpha 6 chain ISO (MGI:2148900|PMID:10965041) MGI PMID:10965041 MGI:2148900 NCBI chrNW_004936499:6,421,930...6,640,429 JBrowse link
G Crispld2 cysteine rich secretory protein LCCL domain containing 2 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936641:3,228,791...3,277,379 JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO (MGI:4946456|PMID:21148564) MGI PMID:21148564 MGI:4946456 NCBI chrNW_004936555:3,639,459...3,807,483 JBrowse link
G CUNH6orf15 chromosome unknown C6orf15 homolog ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936837:781,958...783,112 JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936905:419,478...427,335 JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ISO (MGI:5294250|PMID:21972064) MGI PMID:21972064 MGI:5294250 NCBI chrNW_004936797:332,962...377,397 JBrowse link
G Ecm2 extracellular matrix protein 2 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936487:2,117,226...2,150,382 JBrowse link
G Egfl6 EGF like domain multiple 6 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936470:3,156,593...3,215,039 JBrowse link
G Egflam EGF like, fibronectin type III and laminin G domains ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936518:3,706,818...3,882,308 JBrowse link
G Elf3 E74 like ETS transcription factor 3 ISO (MGI:2179164|PMID:11984530) MGI PMID:11984530 MGI:2179164 NCBI chrNW_004936567:2,494,645...2,500,361 JBrowse link
G Eln elastin ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G Emilin1 elastin microfibril interfacer 1 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936493:5,455,369...5,463,205 JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO (MGI:1267106|PMID:9651581) MGI PMID:9651581 MGI:1267106 NCBI chrNW_004936706:1,816,561...1,829,638 JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha ISO (MGI:5461404|PMID:22981861) MGI PMID:22981861 MGI:5461404 NCBI chrNW_004936697:2,154,517...2,199,913 JBrowse link
G Ero1b endoplasmic reticulum oxidoreductase 1 beta ISO (MGI:5461404|PMID:22981861) MGI PMID:22981861 MGI:5461404 NCBI chrNW_004936484:16,495,953...16,537,716 JBrowse link
G Fbln1 fibulin 1 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936629:4,170,186...4,242,100 JBrowse link
G Fbln5 fibulin 5 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936733:136,374...200,106 JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:12388756 RGD:1358623 NCBI chrNW_004936586:1,708,803...1,773,372 JBrowse link
G Foxf1 forkhead box F1 ISO (MGI:3617131|PMID:16439479) MGI PMID:16439479 MGI:3617131 NCBI chrNW_004943883:4...1,756 JBrowse link
G Foxf2 forkhead box F2 ISO (MGI:3617131|PMID:16439479) MGI PMID:16439479 MGI:3617131 NCBI chrNW_004936633:2,538,209...2,543,649 JBrowse link
G Gfap glial fibrillary acidic protein ISO (MGI:3719550|PMID:11487638) MGI PMID:11487638 MGI:3719550 NCBI chrNW_004936541:1,265,915...1,275,232 JBrowse link
G Gfod2 glucose-fructose oxidoreductase domain containing 2 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936475:18,065,626...18,114,683 JBrowse link
G Hpse2 heparanase 2 (inactive) ISO (MGI:5621237|PMID:25510506) MGI PMID:25510506 MGI:5621237 NCBI chrNW_004936636:774,705...1,402,009 JBrowse link
G Hsd17b12 hydroxysteroid 17-beta dehydrogenase 12 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936562:4,802,282...4,949,500 JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO (MGI:1349497|PMID:10579729) MGI PMID:10579729 MGI:1349497 NCBI chrNW_004936474:7,407,622...7,478,950 JBrowse link
G Ibsp integrin binding sialoprotein ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936905:316,459...323,446 JBrowse link
G Idua alpha-L-iduronidase ISO (MGI:5632446|PMID:25410057) MGI PMID:25410057 MGI:5632446 NCBI chrNW_004936477:22,200,471...22,215,473 JBrowse link
G Itga8 integrin subunit alpha 8 ISO (MGI:1355040|PMID:10742111) MGI PMID:10742111 MGI:1355040 NCBI chrNW_004936574:5,985,181...6,155,067 JBrowse link
G Itih1 inter-alpha-trypsin inhibitor heavy chain 1 ISO (MGI:3761906|PMID:17675295) MGI PMID:17675295 MGI:3761906 NCBI chrNW_004936473:3,534,071...3,548,554 JBrowse link
G Kazald1 Kazal type serine peptidase inhibitor domain 1 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936600:4,625,909...4,633,163 JBrowse link
G Lgals3 galectin 3 ISO (MGI:3589495|PMID:15800063) MGI PMID:15800063 MGI:3589495 NCBI chrNW_004936697:20,861...38,568 JBrowse link
G Mia MIA SH3 domain containing ISO (MGI:2158918|PMID:11839810) MGI PMID:11839810 MGI:2158918 NCBI chrNW_004936661:3,047,735...3,049,050 JBrowse link
G Mmp11 matrix metallopeptidase 11 ISO (MGI:3822602|PMID:18622425) MGI PMID:18622425 MGI:3822602 NCBI chrNW_004936619:1,309,013...1,320,062 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO (MGI:3589495|PMID:15800063) MGI PMID:15800063 MGI:3589495 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Mpzl3 myelin protein zero like 3 ISO (MGI:3055636|PMID:15482472) MGI PMID:15482472 MGI:3055636 NCBI chrNW_004936542:3,314,921...3,332,785 JBrowse link
G Myf5 myogenic factor 5 ISO (MGI:3624056|PMID:16554364) MGI PMID:16554364 MGI:3624056 NCBI chrNW_004936698:1,609,227...1,611,283 JBrowse link
G Ndnf neuron derived neurotrophic factor ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936662:593,848...624,974 JBrowse link
G Nf1 neurofibromin 1 ISO (MGI:3655425|PMID:16835260) MGI PMID:16835260 MGI:3655425 NCBI chrNW_004936538:3,394,623...3,596,025 JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 ISO (MGI:3655550|PMID:10586052) MGI PMID:10586052 MGI:3655550 NCBI chrNW_004936600:3,465,016...3,471,258 JBrowse link
G Nid1 nidogen 1 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936484:16,621,666...16,691,304 JBrowse link
G Nox1 NADPH oxidase 1 ISO (MGI:3615064|PMID:16386251) MGI PMID:16386251 MGI:3615064 NCBI chrNW_004936584:6,023,960...6,040,041 JBrowse link
G Nphp3 nephrocystin 3 ISO (MGI:71873|PMID:7539536) MGI PMID:7539536 MGI:71873 NCBI chrNW_004936529:6,013,321...6,048,249 JBrowse link
G Npnt nephronectin ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936814:1,096,604...1,165,755 JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:3615102|PMID:16424942) MGI PMID:16424942 MGI:3615102 NCBI chrNW_004936564:4,432,556...4,453,056 JBrowse link
G Olfml2a olfactomedin like 2A ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936487:12,999,818...13,031,539 JBrowse link
G Olfml2b olfactomedin like 2B ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936831:169,866...210,974 JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO (MGI:3525374|PMID:15543606) MGI PMID:15543606 MGI:3525374 NCBI chrNW_004936482:16,804,129...16,853,539 JBrowse link
G Pomt1 protein O-mannosyltransferase 1 ISO (MGI:3057057|PMID:15383666) MGI PMID:15383666 MGI:3057057 NCBI chrNW_004936487:18,249,472...18,267,875 JBrowse link
G Postn periostin ISO (MGI:3610687|PMID:16314533) MGI PMID:16314533 MGI:3610687 NCBI chrNW_004936472:31,644,778...31,677,572 JBrowse link
G Prdx4 peroxiredoxin 4 ISO (MGI:5461404|PMID:22981861) MGI PMID:22981861 MGI:5461404 NCBI chrNW_004936624:859,281...873,784 JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO (MGI:2679914|PMID:14642275) MGI PMID:14642275 MGI:2679914 NCBI chrNW_004936470:10,379,855...10,578,531 JBrowse link
G Ptx3 pentraxin 3 ISO (MGI:3761906|PMID:17675295) MGI PMID:17675295 MGI:3761906 NCBI chrNW_004936519:4,303,549...4,309,143 JBrowse link
G Pxdn peroxidasin ISO (PMID:19590037)
(MGI:3851833|PMID:19590037)
UniProtKB
UniProt
PMID:19590037 MGI:3851833 NCBI chrNW_004936532:462,507...543,549 JBrowse link
G Reck reversion inducing cysteine rich protein with kazal motifs ISO (MGI:3621661|PMID:11747814) MGI PMID:11747814 MGI:3621661 NCBI chrNW_004936524:4,021,666...4,099,703 JBrowse link
G Rxfp1 relaxin family peptide receptor 1 ISO (MGI:3054144|PMID:15256493) MGI PMID:15256493 MGI:3054144 NCBI chrNW_004936576:4,996,203...5,131,485 JBrowse link
G Serac1 serine active site containing 1 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936489:9,911,484...9,983,826 JBrowse link
G Serpinb5 serpin family B member 5 ISO (MGI:3806752|PMID:18593913) MGI PMID:18593913 MGI:3806752 NCBI chrNW_004936497:2,067,796...2,089,965 JBrowse link
G Slc39a8 solute carrier family 39 member 8 ISO (PMID:29337306)
(MGI:6117959|PMID:29337306)
UniProt PMID:29337306 MGI:6117959 NCBI chrNW_004936520:961,376...1,036,801 JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (MGI:3776329|PMID:18267097) MGI PMID:18267097 MGI:3776329 NCBI chrNW_004936659:1,152,846...1,246,718 JBrowse link
G Smoc1 SPARC related modular calcium binding 1 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936495:13,056,851...13,215,581 JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936489:17,454,274...17,594,894 JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:5523731|PMID:24191021)
(MGI:3709829|PMID:17350610)
MGI PMID:17350610 PMID:24191021 MGI:3709829 MGI:5523731 NCBI chrNW_004936655:1,849,044...1,852,648 JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 ISO (MGI:3700412|PMID:17174946) MGI PMID:17174946 MGI:3700412 NCBI chrNW_004936471:4,238,883...4,251,291 JBrowse link
G Spock2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936521:6,799,823...6,823,917 JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (MGI:2156271|PMID:11784073), (MGI:3522686|PMID:15528466) MGI PMID:11784073 PMID:15528466 MGI:2156271 MGI:3522686 NCBI chrNW_004936628:310,720...394,002 JBrowse link
G Tgfbi transforming growth factor beta induced ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936597:3,128,007...3,161,885 JBrowse link
G Tnf tumor necrosis factor ISO (MGI:3510270|PMID:15381731) MGI PMID:15381731 MGI:3510270 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11b ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936470:27,571,263...27,598,725 JBrowse link
G Tnr tenascin R ISO (MGI:1337730|PMID:10341229), (MGI:1927381|PMID:11077416), (MGI:3652670|PMID:16870730) MGI PMID:10341229 PMID:11077416 PMID:16870730 MGI:1337730 MGI:1927381 MGI:3652670 NCBI chrNW_004936481:12,586,460...12,972,348 JBrowse link
G Tnxb tenascin XB ISO (MGI:3052884|PMID:15242785) MGI PMID:15242785 MGI:3052884 NCBI chrNW_004936727:1,492,725...1,550,762 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO (MGI:3619780|PMID:16537898) MGI PMID:16537898 MGI:3619780 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
G Vit vitrin ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936663:1,402,713...1,508,253 JBrowse link
G Vtn vitronectin ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chrNW_004936538:4,522,275...4,525,245 JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 ISO (MGI:3807344|PMID:18757743)
(MGI:3849094|PMID:19279005)
MGI PMID:18757743 PMID:19279005 MGI:3807344 MGI:3849094 NCBI chrNW_004936737:1,733,837...1,738,861 JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:3793974|PMID:17943183) MGI PMID:17943183 MGI:3793974 NCBI chrNW_004936864:150,742...179,205 JBrowse link
basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ISO (MGI:3618677|PMID:16467571) MGI PMID:16467571 MGI:3618677 NCBI chrNW_004936543:1,090,268...1,097,170 JBrowse link
G Ramp2 receptor activity modifying protein 2 ISO (MGI:3772552|PMID:18097473) UniProt PMID:18097473 MGI:3772552 NCBI chrNW_004936490:17,479,899...17,481,788 JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctss cathepsin S ISO (PMID:22952693)
(MGI:5553237|PMID:22952693)
BHF-UCL PMID:22952693 MGI:5553237 NCBI chrNW_004936580:963,176...991,732 JBrowse link
G Hpn hepsin ISO (PMID:16908524) UniProtKB PMID:16908524 NCBI chrNW_004936570:1,170,951...1,186,501 JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 ISO (MGI:2176684|PMID:11884617) MGI PMID:11884617 MGI:2176684 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Cav2 caveolin 2 ISO (MGI:2176684|PMID:11884617) MGI PMID:11884617 MGI:2176684 NCBI chrNW_004936589:2,553,932...2,561,186 JBrowse link
G Col4a1 collagen type IV alpha 1 chain ISO (PMID:18160688), (PMID:19949034), (PMID:23065703) BHF-UCL PMID:18160688 PMID:19949034 PMID:23065703 NCBI chrNW_004936472:2,416,043...2,543,561 JBrowse link
G Dag1 dystroglycan 1 ISO (MGI:5470500|PMID:23217742) MGI PMID:23217742 MGI:5470500 NCBI chrNW_004936529:1,099,510...1,171,587 JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:5766597|PMID:26024086) MGI PMID:26024086 MGI:5766597 NCBI chrNW_004936470:28,303,213...28,566,470 JBrowse link
G Fermt1 fermitin family member 1 ISO (MGI:5571208|PMID:24681597) CAFA PMID:24681597 MGI:5571208 NCBI chrNW_004936485:12,985,552...13,016,997 JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 ISO (MGI:4950310|PMID:21350012) UniProt PMID:21350012 MGI:4950310 NCBI chrNW_004936488:13,372,889...13,457,586 JBrowse link
G Fshr follicle stimulating hormone receptor ISO (MGI:1313058|PMID:9811848) MGI PMID:9811848 MGI:1313058 NCBI chrNW_004936508:3,601,205...3,754,234 JBrowse link
G Gas2 growth arrest specific 2 ISO (MGI:6102554|PMID:27734842) MGI PMID:27734842 MGI:6102554 NCBI chrNW_004936654:3,326,557...3,448,930 JBrowse link
G Itgb1 integrin subunit beta 1 ISO (MGI:5571208|PMID:24681597) CAFA PMID:24681597 MGI:5571208 NCBI chrNW_004936574:1,465,981...1,495,717 JBrowse link
G Mmp11 matrix metallopeptidase 11 ISO (MGI:3822602|PMID:18622425) MGI PMID:18622425 MGI:3822602 NCBI chrNW_004936619:1,309,013...1,320,062 JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:3613258|PMID:16436605) MGI PMID:16436605 MGI:3613258 NCBI chrNW_004936724:1,747,015...1,780,298 JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A ISO (MGI:4849883|PMID:21069829) MGI PMID:21069829 MGI:4849883 NCBI chrNW_004936888:57,212...62,722 JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type 2 ISO (MGI:4360135|PMID:19592578) MGI PMID:19592578 MGI:4360135 NCBI chrNW_004936801:1,041,946...1,069,617 JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (MGI:3610667|PMID:16186342) MGI PMID:16186342 MGI:3610667 NCBI chrNW_004936534:2,481,804...2,518,573 JBrowse link
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan ISO (MGI:2664273|PMID:3070812) MGI PMID:3070812 MGI:2664273 NCBI chrNW_004936483:14,811,152...14,846,305 JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif 14 ISO (MGI:2158963|PMID:11741898) MGI PMID:11741898 MGI:2158963 NCBI chrNW_004936521:7,951,176...8,025,666 JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 ISO (MGI:3621082|PMID:16556917) MGI PMID:16556917 MGI:3621082 NCBI chrNW_004936739:1,394,119...1,643,422 JBrowse link
G Anxa2 annexin A2 ISO (MGI:3027337|PMID:14702107) MGI PMID:14702107 MGI:3027337 NCBI chrNW_004936471:21,274,112...21,329,286 JBrowse link
G Atp7a ATPase copper transporting alpha ISO (MGI:3616522|PMID:16338116)
(MGI:54357|PMID:20889), (MGI:83811|PMID:8895222)
(MGI:83737|PMID:8096378)
(MGI:53875|PMID:4808708)
MGI PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 MGI:3616522 MGI:53875 MGI:54357 MGI:83737 MGI:83811 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO (MGI:2664273|PMID:3070812), (MGI:3694610|PMID:17029294), (MGI:3766851|PMID:17683922), (MGI:5014156|PMID:21467034), (MGI:53676|PMID:4100752), (MGI:53732|PMID:4110409), (MGI:70833|PMID:7859283)
(MGI:3694610|PMID:17029294), (MGI:5014156|PMID:21467034)
MGI PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 PMID:17683922 PMID:21467034 MGI:2664273 MGI:3694610 MGI:3766851 MGI:5014156 MGI:53676 MGI:53732 MGI:70833 NCBI chrNW_004936730:466,912...680,823 JBrowse link
G Col11a2 collagen type XI alpha 2 chain ISO (PMID:9188673)
(MGI:1350441|PMID:10581026), (MGI:2151300|PMID:11668593)
UniProtKB
MGI
PMID:9188673 PMID:10581026 PMID:11668593 MGI:1350441 MGI:2151300 NCBI chrNW_004936476:25,663,563...25,692,315 JBrowse link
G Col14a1 collagen type XIV alpha 1 chain ISO (MGI:5444801|PMID:22906538) MGI PMID:22906538 MGI:5444801 NCBI chrNW_004936470:26,440,606...26,643,015 JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO (PMID:14976317), (PMID:15095409), (PMID:17211858), (PMID:18375391) UniProtKB PMID:14976317 PMID:15095409 PMID:17211858 PMID:18375391 NCBI chrNW_004936490:11,448,552...11,465,836 JBrowse link
G Col1a2 collagen type I alpha 2 chain ISO (PMID:17211858), (PMID:18375391) UniProtKB PMID:17211858 PMID:18375391 NCBI chrNW_004936585:5,650,322...5,686,393 JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO (PMID:1429602)
(MGI:85592|PMID:9022054)
(MGI:1315157|PMID:9832566), (MGI:1327515|PMID:9915573), (MGI:3618042|PMID:11171689), (MGI:77563|PMID:7590256)
(MGI:2664273|PMID:3070812), (MGI:55057|PMID:7276808), (MGI:84914|PMID:8989518)
BHF-UCL
MGI
PMID:1429602 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 PMID:9022054 PMID:9832566 PMID:9915573 PMID:11171689 MGI:1315157 MGI:1327515 MGI:2664273 MGI:3618042 MGI:55057 MGI:77563 MGI:84914 MGI:85592 NCBI chrNW_004936512:5,861,933...5,894,898 JBrowse link
G Col3a1 collagen type III alpha 1 chain ISO (PMID:7546986), (PMID:9036918)
(MGI:86656|PMID:9050868)
UniProtKB
MGI
PMID:7546986 PMID:9036918 PMID:9050868 MGI:86656 NCBI chrNW_004936506:8,886,494...8,923,921 JBrowse link
G Col5a1 collagen type V alpha 1 chain ISO (PMID:11278977), (PMID:15095409), (PMID:9683580)
(MGI:3694610|PMID:17029294), (MGI:5014156|PMID:21467034)
(MGI:3663234|PMID:16492673), (MGI:3664596|PMID:15383546), (MGI:3694610|PMID:17029294)
UniProtKB
MGI
PMID:9683580 PMID:11278977 PMID:15095409 PMID:15383546 PMID:16492673 PMID:17029294 PMID:21467034 MGI:3663234 MGI:3664596 MGI:3694610 MGI:5014156 NCBI chrNW_004936669:2,474,381...2,613,541 JBrowse link
G Col5a2 collagen type V alpha 2 chain ISO (PMID:9425231)
(MGI:3047505|PMID:15199158)
UniProtKB
UniProt
PMID:9425231 PMID:15199158 MGI:3047505 NCBI chrNW_004936506:8,739,475...8,873,073 JBrowse link
G Comp cartilage oligomeric matrix protein ISO (MGI:5568656|PMID:24312420)
(MGI:5922181|PMID:26746240)
(MGI:4412116|PMID:19808781)
MGI PMID:19808781 PMID:24312420 PMID:26746240 MGI:4412116 MGI:5568656 MGI:5922181 NCBI chrNW_004936596:2,544,389...2,551,155 JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO (MGI:5318020|PMID:19900459) UniProt PMID:19900459 MGI:5318020 NCBI chrNW_004936831:799,948...946,139 JBrowse link
G Dpt dermatopontin ISO (MGI:2386368|PMID:12230512), (MGI:3655897|PMID:16877395) MGI PMID:12230512 PMID:16877395 MGI:2386368 MGI:3655897 NCBI chrNW_004936481:17,723,108...17,747,712 JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:6406768|PMID:19850926) MGI PMID:19850926 MGI:6406768 NCBI chrNW_004936470:28,303,213...28,566,470 JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 ISO (MGI:6114458|PMID:28206698)
(MGI:5585367|PMID:24777781)
MGI PMID:24777781 PMID:28206698 MGI:5585367 MGI:6114458 NCBI chrNW_004936490:16,712,843...16,720,438 JBrowse link
G Foxc2 forkhead box C2 ISO (MGI:1355577|PMID:10767326) MGI PMID:10767326 MGI:1355577 NCBI chrNW_004936641:2,236,224...2,238,501 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) BHF-UCL PMID:15539560 NCBI chrNW_004936673:1,394,743...1,399,726 JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO (MGI:1353150|PMID:10660670) MGI PMID:10660670 MGI:1353150 NCBI chrNW_004936487:14,513,303...14,587,771 JBrowse link
G LOC101970101 cytochrome P450 1B1 ISO (MGI:5544856|PMID:23979599) UniProt PMID:23979599 MGI:5544856 NCBI chrNW_004936663:345,021...355,188 JBrowse link
G Lox lysyl oxidase ISO (MGI:5766417|PMID:26700732)
(MGI:3604822|PMID:16192629)
RGD
MGI
PMID:16192629 PMID:16432278 PMID:16804742 PMID:26700732 MGI:3604822 MGI:5766417 RGD:1600668 RGD:1600669 NCBI chrNW_004936575:2,526,067...2,533,996 JBrowse link
G Loxl2 lysyl oxidase like 2 ISO (PMID:21835952) UniProtKB PMID:21835952 NCBI chrNW_004936555:6,781,563...6,865,662 JBrowse link
G Mkx mohawk homeobox ISO (MGI:5287220|PMID:20696843) MGI PMID:20696843 MGI:5287220 NCBI chrNW_004936613:2,019,815...2,083,724 JBrowse link
G Mmp11 matrix metallopeptidase 11 ISO (MGI:3822602|PMID:18622425) MGI PMID:18622425 MGI:3822602 NCBI chrNW_004936619:1,309,013...1,320,062 JBrowse link
G Nf1 neurofibromin 1 ISO (MGI:1339276|PMID:10383727) MGI PMID:10383727 MGI:1339276 NCBI chrNW_004936538:3,394,623...3,596,025 JBrowse link
G Optc opticin ISO (MGI:6148629|PMID:29323130) UniProt PMID:29323130 MGI:6148629 NCBI chrNW_004936567:1,142,994...1,152,311 JBrowse link
G P3h1 prolyl 3-hydroxylase 1 ISO (MGI:4830073|PMID:20363744) MGI PMID:20363744 MGI:4830073 NCBI chrNW_004936474:24,077,270...24,093,399 JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 (inactive) ISO (MGI:5779580|PMID:27119146) UniProt PMID:27119146 MGI:5779580 NCBI chrNW_004936490:16,705,716...16,712,324 JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 ISO (MGI:3706231|PMID:17135260) MGI PMID:17135260 MGI:3706231 NCBI chrNW_004936521:5,981,205...6,045,195 JBrowse link
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ISO (MGI:3618677|PMID:16467571) MGI PMID:16467571 MGI:3618677 NCBI chrNW_004936543:1,090,268...1,097,170 JBrowse link
G Pxdn peroxidasin ISO (PMID:22842973) FlyBase PMID:22842973 NCBI chrNW_004936532:462,507...543,549 JBrowse link
G Scx scleraxis bHLH transcription factor ISO (MGI:4413438|PMID:18802027) UniProt PMID:18802027 MGI:4413438 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
G Serpinf2 serpin family F member 2 ISO (MGI:5306295|PMID:17958745) BHF-UCL PMID:17958745 MGI:5306295 NCBI chrNW_004936538:7,870,898...7,877,279 JBrowse link
G Serpinh1 serpin family H member 1 ISO (MGI:5494537|PMID:22492985)
(MGI:1890100|PMID:10995453)
MGI PMID:10995453 PMID:22492985 MGI:1890100 MGI:5494537 NCBI chrNW_004936498:4,341,944...4,351,432 JBrowse link
G Sfrp2 secreted frizzled related protein 2 ISO (MGI:3839034|PMID:19079247) MGI PMID:19079247 MGI:3839034 NCBI chrNW_004936576:604,174...612,440 JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (PMID:16891397) BHF-UCL PMID:16891397 NCBI chrNW_004936628:310,720...394,002 JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 ISO (MGI:3588906|PMID:15993878) MGI PMID:15993878 MGI:3588906 NCBI chrNW_004936524:7,656,523...7,680,043 JBrowse link
G Tnxb tenascin XB ISO (MGI:3052887|PMID:15194424)
(MGI:2177884|PMID:11925569)
MGI PMID:11925569 PMID:15194424 MGI:2177884 MGI:3052887 NCBI chrNW_004936727:1,492,725...1,550,762 JBrowse link
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog ISO (MGI:5804716|PMID:27435297) MGI PMID:27435297 MGI:5804716 NCBI chrNW_004936488:6,247,329...6,277,494 JBrowse link
G Vps33b VPS33B late endosome and lysosome associated ISO (MGI:5804716|PMID:27435297) MGI PMID:27435297 MGI:5804716 NCBI chrNW_004936483:16,007,448...16,031,353 JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:54141|PMID:937819), (MGI:54357|PMID:20889), (MGI:63907|PMID:3385878)
(MGI:3616522|PMID:16338116)
MGI PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 MGI:3616522 MGI:54141 MGI:54357 MGI:63907 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 ISO (MGI:4397710|PMID:19855011) MGI PMID:19855011 MGI:4397710 NCBI chrNW_004936599:3,663,288...3,670,048 JBrowse link
G Emilin1 elastin microfibril interfacer 1 ISO (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chrNW_004936493:5,455,369...5,463,205 JBrowse link
G Fbln5 fibulin 5 ISO (PMID:17035250)
(MGI:2681470|PMID:11805835), (MGI:2681471|PMID:11805834)
UniProtKB
BHF-UCL
PMID:11805834 PMID:11805835 PMID:17035250 MGI:2681470 MGI:2681471 NCBI chrNW_004936733:136,374...200,106 JBrowse link
G Lox lysyl oxidase ISO (MGI:3604822|PMID:16192629), (MGI:3609311|PMID:12417550)
(MGI:5616293|PMID:23413430)
RGD
MGI
PMID:12417550 PMID:16192629 PMID:16432278 PMID:23413430 MGI:3604822 MGI:3609311 MGI:5616293 RGD:1600669 NCBI chrNW_004936575:2,526,067...2,533,996 JBrowse link
G Mfap4 microfibril associated protein 4 ISO (PMID:22355679) BHF-UCL PMID:22355679 NCBI chrNW_004936881:369,161...372,628 JBrowse link
G Myh11 myosin heavy chain 11 ISO (PMID:16444274) UniProtKB PMID:16444274 NCBI chrNW_004936501:3,223,057...3,313,487 JBrowse link
G Thsd4 thrombospondin type 1 domain containing 4 ISO (MGI:4453293|PMID:19940141) MGI PMID:19940141 MGI:4453293 NCBI chrNW_004936471:31,002,241...31,213,057 JBrowse link
G Tnxb tenascin XB ISO (PMID:15102077) UniProtKB PMID:15102077 NCBI chrNW_004936727:1,492,725...1,550,762 JBrowse link
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a2 collagen type I alpha 2 chain ISO (MGI:5468210|PMID:22910579) MGI PMID:22910579 MGI:5468210 NCBI chrNW_004936585:5,650,322...5,686,393 JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 ISO (MGI:6094666|PMID:28774593) MGI PMID:28774593 MGI:6094666 NCBI chrNW_004936490:16,712,843...16,720,438 JBrowse link
G Gas6 growth arrest specific 6 ISO PMID:18374201 UniProt PMID:18374201 RGD:8554638 NCBI chrNW_004936472:27,116...57,158 JBrowse link
G Gpm6b glycoprotein M6B ISO (PMID:21638316) UniProtKB PMID:21638316 NCBI chrNW_004936470:3,332,856...3,496,178 JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 ISO (MGI:4437139|PMID:20181608) MGI PMID:20181608 MGI:4437139 NCBI chrNW_004936580:5,792,421...5,811,096 JBrowse link
G Has1 hyaluronan synthase 1 ISO (MGI:5508296|PMID:10455188) UniProt PMID:10455188 MGI:5508296 NCBI chrNW_004937026:125,622...132,141 JBrowse link
G Has2 hyaluronan synthase 2 ISO (MGI:5508296|PMID:10455188) UniProt PMID:10455188 MGI:5508296 NCBI chrNW_004936470:25,418,069...25,443,332 JBrowse link
G Has3 hyaluronan synthase 3 ISO (MGI:5508296|PMID:10455188) UniProt PMID:10455188 MGI:5508296 NCBI chrNW_004936475:19,270,788...19,282,922 JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 ISO (PMID:23867277) UniProt PMID:23867277 NCBI chrNW_004936481:8,975,818...9,013,684 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO (MGI:5468210|PMID:22910579) MGI PMID:22910579 MGI:5468210 NCBI chrNW_004936475:18,667,563...18,755,132 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:19734317)
(MGI:4820704|PMID:19734317)
BHF-UCL PMID:19734317 MGI:4820704 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 ISO positive regulation RGD PMID:18613219 RGD:2314619 NCBI chrNW_004936560:42,561...45,748 JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 ISO (MGI:4438316|PMID:19767743) UniProt PMID:19767743 MGI:4438316 NCBI chrNW_004936562:2,739,908...2,772,484 JBrowse link
G Eng endoglin ISO RGD PMID:15539634 RGD:1601032 NCBI chrNW_004936487:15,467,165...15,499,180 JBrowse link
G Tmem38b transmembrane protein 38B ISO (MGI:6141091|PMID:27188440) MGI PMID:27188440 MGI:6141091 NCBI chrNW_004936559:6,501,890...6,553,446 JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capg capping actin protein, gelsolin like NOT ISO (PMID:24236012) UniProtKB PMID:24236012 NCBI chrNW_004936712:1,793,666...1,803,621 JBrowse link
G Eng endoglin ISO (PMID:18223685) BHF-UCL PMID:18223685 NCBI chrNW_004936487:15,467,165...15,499,180 JBrowse link
G Exoc8 exocyst complex component 8 ISO (PMID:24344185) UniProtKB PMID:24344185 NCBI chrNW_004936484:19,403,458...19,407,202 JBrowse link
G Flot1 flotillin 1 ISO (PMID:21119006) UniProtKB PMID:21119006 NCBI chrNW_004936837:387,012...401,076 JBrowse link
G Gsn gelsolin NOT ISO (PMID:24236012) UniProtKB PMID:24236012 NCBI chrNW_004936487:9,749,755...9,802,787 JBrowse link
G Kif9 kinesin family member 9 ISO (PMID:21119006) UniProtKB PMID:21119006 NCBI chrNW_004936596:952,028...1,010,889 JBrowse link
G Klk4 kallikrein related peptidase 4 ISO (MGI:5502300|PMID:22243248) MGI PMID:22243248 MGI:5502300 NCBI chrNW_004936889:583,259...586,412 JBrowse link
G Lamc1 laminin subunit gamma 1 ISO (PMID:15159456) HGNC PMID:15159456 NCBI chrNW_004936481:6,675,620...6,783,184 JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 ISO (PMID:24236012) UniProtKB PMID:24236012 NCBI chrNW_004936857:646,363...726,338 JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO (PMID:8576151), (PMID:9065415)
(MGI:3771509|PMID:17987127)
UniProtKB
UniProt
PMID:8576151 PMID:9065415 PMID:17987127 MGI:3771509 NCBI chrNW_004936551:5,040,084...5,050,384 JBrowse link
G Mmp20 matrix metallopeptidase 20 ISO (MGI:5502300|PMID:22243248) MGI PMID:22243248 MGI:5502300 NCBI chrNW_004936551:5,310,426...5,352,883 JBrowse link
G Noxo1 NADPH oxidase organizer 1 ISO (PMID:19755710) UniProtKB PMID:19755710 NCBI chrNW_004936694:2,054,429...2,060,098 JBrowse link
G Plg plasminogen ISO (PMID:14699093) BHF-UCL PMID:14699093 NCBI chrNW_004936489:11,775,243...11,808,482 JBrowse link
G Sh3pxd2b SH3 and PX domains 2B ISO (PMID:19755710) UniProtKB PMID:19755710 NCBI chrNW_004936609:2,934,814...2,975,111 JBrowse link
G Washc1 WASH complex subunit 1 ISO (PMID:24344185) UniProtKB PMID:24344185 NCBI chrNW_004936606:209,289...228,986 JBrowse link
G Wdr72 WD repeat domain 72 ISO (MGI:5906533|PMID:26247047) MGI PMID:26247047 MGI:5906533 NCBI chrNW_004936471:15,233,828...15,416,415 JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein ISO (MGI:5588521|PMID:23900597) MGI PMID:23900597 MGI:5588521 NCBI chrNW_004936905:458,062...463,359 JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a3 collagen type IV alpha 3 chain ISO (MGI:3610934|PMID:12631063) UniProt PMID:12631063 MGI:3610934 NCBI chrNW_004936525:8,642,744...8,774,975 JBrowse link
G Col4a4 collagen type IV alpha 4 chain ISO (PMID:17942953), (PMID:19675380)
(MGI:1347142|PMID:10534397)
UniProtKB
MGI
PMID:10534397 PMID:17942953 PMID:19675380 MGI:1347142 NCBI chrNW_004936525:8,788,753...8,899,671 JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:4360160|PMID:18480751) MGI PMID:18480751 MGI:4360160 NCBI chrNW_004936470:28,303,213...28,566,470 JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 ISO (MGI:3776221|PMID:16041630) UniProt PMID:16041630 MGI:3776221 NCBI chrNW_004936493:5,246,803...5,258,147 JBrowse link
G Myo1e myosin IE ISO (MGI:4441423|PMID:19005011) UniProt PMID:19005011 MGI:4441423 NCBI chrNW_004936471:20,244,424...20,435,604 JBrowse link
G Nid1 nidogen 1 ISO (MGI:2680880|PMID:14566019) MGI PMID:14566019 MGI:2680880 NCBI chrNW_004936484:16,621,666...16,691,304 JBrowse link
G Sulf1 sulfatase 1 ISO (MGI:5306737|PMID:21719793) UniProt PMID:21719793 MGI:5306737 NCBI chrNW_004936496:4,755,806...4,931,964 JBrowse link
G Sulf2 sulfatase 2 ISO (MGI:5306737|PMID:21719793) UniProt PMID:21719793 MGI:5306737 NCBI chrNW_004936514:5,819,375...5,899,324 JBrowse link
G Wt1 WT1 transcription factor ISO (PMID:19205749) UniProtKB PMID:19205749 NCBI chrNW_004936533:5,411,949...5,459,693 JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 ISO (MGI:3664526|PMID:16886065), (MGI:75217|PMID:7670489) MGI PMID:7670489 PMID:16886065 MGI:3664526 MGI:75217 NCBI chrNW_004936529:826,178...841,304 JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chadl chondroadherin like ISO (PMID:25451920) UniProtKB PMID:25451920 NCBI chrNW_004936492:633,443...643,550 JBrowse link
G Emilin1 elastin microfibril interfacer 1 ISO (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chrNW_004936493:5,455,369...5,463,205 JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antxr1 ANTXR cell adhesion molecule 1 ISO (MGI:5662198|PMID:25572963) MGI PMID:25572963 MGI:5662198 NCBI chrNW_004936491:13,288,986...13,516,878 JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen dependent TFPI regulating protein ISO (PMID:28341552) BHF-UCL PMID:28341552 NCBI chrNW_004936534:1,332,682...1,389,242 JBrowse link
G Notch1 notch receptor 1 ISO (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chrNW_004936709:1,407,327...1,421,448 JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chrNW_004936474:908,414...935,765 JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpp4 dipeptidyl peptidase 4 ISO (PMID:16651416) UniProtKB PMID:16651416 NCBI chrNW_004936469:16,979,220...17,062,198 JBrowse link
G Fap fibroblast activation protein alpha ISO (PMID:16651416) UniProtKB PMID:16651416 NCBI chrNW_004936469:16,817,000...16,889,066 JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fap fibroblast activation protein alpha ISO (PMID:10455171) UniProtKB PMID:10455171 NCBI chrNW_004936469:16,817,000...16,889,066 JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 ISO (PMID:23940118) UniProtKB PMID:23940118 NCBI chrNW_004936469:49,067,357...49,335,212 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 ISO (PMID:23940118) UniProtKB PMID:23940118 NCBI chrNW_004936473:23,756,291...23,940,966 JBrowse link
G Dag1 dystroglycan 1 ISO (PMID:23940118) UniProtKB PMID:23940118 NCBI chrNW_004936529:1,099,510...1,171,587 JBrowse link
G Phldb1 pleckstrin homology like domain family B member 1 ISO (PMID:23940118) UniProtKB PMID:23940118 NCBI chrNW_004936542:3,639,992...3,688,000 JBrowse link
G Phldb2 pleckstrin homology like domain family B member 2 ISO (PMID:23940118) UniProtKB PMID:23940118 NCBI chrNW_004936834:592,688...791,533 JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 ISO (PMID:27402836) UniProtKB PMID:27402836 NCBI chrNW_004936596:3,377,805...3,395,124 JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO (MGI:6112863|PMID:29304157) BHF-UCL PMID:29304157 MGI:6112863 NCBI chrNW_004936565:1,596,227...1,746,706 JBrowse link
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 ISO (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chrNW_004936493:5,455,369...5,463,205 JBrowse link
G Rgcc regulator of cell cycle ISO (PMID:21307346) BHF-UCL PMID:21307346 NCBI chrNW_004936667:232,807...245,131 JBrowse link
G Smad3 SMAD family member 3 ISO (PMID:21307346) BHF-UCL PMID:21307346 NCBI chrNW_004936471:27,080,662...27,185,861 JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:4848001|PMID:20881014) MGI PMID:20881014 MGI:4848001 NCBI chrNW_004936655:1,849,044...1,852,648 JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:21419085 RGD:5129171 NCBI chrNW_004936484:19,713,299...19,721,144 JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO (MGI:3640731|PMID:16730346) BHF-UCL PMID:16730346 MGI:3640731 NCBI chrNW_004936485:12,428,765...12,439,570 JBrowse link
G Cpb2 carboxypeptidase B2 ISO RGD PMID:23369837 RGD:7243115 NCBI chrNW_004936857:577,067...609,855 JBrowse link
G Rgcc regulator of cell cycle ISO (PMID:19158077) BHF-UCL PMID:19158077 NCBI chrNW_004936667:232,807...245,131 JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil2 capping protein regulator and myosin 1 linker 2 ISO (PMID:26466680), (PMID:26578515) UniProtKB PMID:26466680 PMID:26578515 NCBI chrNW_004936475:18,036,233...18,049,144 JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 ISO (PMID:24859005) UniProtKB PMID:24859005 NCBI chrNW_004936469:49,067,357...49,335,212 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 ISO (PMID:24859005) UniProtKB PMID:24859005 NCBI chrNW_004936473:23,756,291...23,940,966 JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO (MGI:2158097|PMID:11723120) UniProt PMID:11723120 MGI:2158097 NCBI chrNW_004936831:799,948...946,139 JBrowse link
G Fscn1 fascin actin-bundling protein 1 ISO (PMID:20137952) UniProtKB PMID:20137952 NCBI chrNW_004936765:609,894...619,417 JBrowse link
G Meltf melanotransferrin ISO (PMID:16713448) UniProtKB PMID:16713448 NCBI chrNW_004936833:853,925...875,069 JBrowse link
G Pdpn podoplanin ISO (PMID:25486435) UniProtKB PMID:25486435 NCBI chrNW_004936474:1,751,159...1,779,011 JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (MGI:5688835|PMID:21984612) UniProt PMID:21984612 MGI:5688835 NCBI chrNW_004936628:310,720...394,002 JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO RGD PMID:19846571 RGD:8693597 NCBI chrNW_004936487:17,690,206...17,819,619 JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:24691542 RGD:11341715 NCBI chrNW_004936726:381,888...425,565 JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO (MGI:6112863|PMID:29304157) BHF-UCL PMID:29304157 MGI:6112863 NCBI chrNW_004936565:1,596,227...1,746,706 JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp1 AE binding protein 1 ISO (PMID:29606302) UniProtKB PMID:29606302 NCBI chrNW_004936478:19,065,092...19,074,783 JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO (PMID:17416596) BHF-UCL PMID:17416596 NCBI chrNW_004936484:19,713,299...19,721,144 JBrowse link
G Has2 hyaluronan synthase 2 ISO RGD PMID:27094859 RGD:12910548 NCBI chrNW_004936470:25,418,069...25,443,332 JBrowse link
G Notch1 notch receptor 1 ISO (MGI:5298073|PMID:21311046) BHF-UCL PMID:21311046 MGI:5298073 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 ISO (PMID:31932796) UniProt PMID:31932796 NCBI chrNW_004936539:290,429...404,928 JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr1 discoidin domain receptor tyrosine kinase 1 ISO (PMID:12065315)
(MGI:3629583|PMID:12065315)
UniProtKB
UniProt
PMID:12065315 MGI:3629583 NCBI chrNW_004936837:523,227...538,799 JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:16738537 RGD:2313717 NCBI chrNW_004936572:3,728,971...3,795,612 JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 ISO (PMID:20876804) UniProtKB PMID:20876804 NCBI chrNW_004936597:1,388,394...1,397,731 JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:4840122|PMID:20980600) MGI PMID:20980600 MGI:4840122 NCBI chrNW_004936487:17,690,206...17,819,619 JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO (MGI:4840122|PMID:20980600) MGI PMID:20980600 MGI:4840122 NCBI chrNW_004936481:9,823,790...9,847,291 JBrowse link
G Angptl7 angiopoietin like 7 ISO (PMID:21199193) UniProt PMID:21199193 NCBI chrNW_004936474:224,836...230,682 JBrowse link
G Itgb3 integrin subunit beta 3 ISO (MGI:5462513|PMID:22984613) MGI PMID:22984613 MGI:5462513 NCBI chrNW_004936541:2,822,789...2,871,069 JBrowse link
G Lemd3 LEM domain containing 3 ISO (MGI:3702795|PMID:16943282) MGI PMID:16943282 MGI:3702795 NCBI chrNW_004936545:3,385,821...3,453,861 JBrowse link
G Slc2a10 solute carrier family 2 member 10 ISO (PMID:26376865) ARUK-UCL PMID:26376865 NCBI chrNW_004936514:6,490,728...6,504,152 JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (MGI:5140242|PMID:21780244) MGI PMID:21780244 MGI:5140242 NCBI chrNW_004936628:310,720...394,002 JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO (MGI:3766861|PMID:17881493) MGI PMID:17881493 MGI:3766861 NCBI chrNW_004936569:1,474,693...1,480,562 JBrowse link

Term paths to the root