Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:chondroitin sulfate biosynthetic process
go back to main search page
Accession:GO:0030206 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.
Synonyms:exact_synonym: chondroitin sulfate anabolism;   chondroitin sulfate biosynthesis;   chondroitin sulfate formation;   chondroitin sulfate synthesis;   chondroitin sulphate biosynthesis;   chondroitin sulphate biosynthetic process


show annotations for term's descendants           Sort by:
 
chondroitin sulfate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07032202.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr18:54,206,651...54,207,523 JBrowse link
G Chpf chondroitin polymerizing factor ISO
IBA
MGI:MGI:2681120|MGI:MGI:5464019 (MGI:MGI:5462280|PMID:22952873), (MGI:MGI:5462286|PMID:22952769)
(PMID:12761225)
PMID:21873635
RGD PMID:12761225, PMID:22952769, PMID:22952873, PMID:21873635 MGI:MGI:5462280, MGI:MGI:5462286, RGD:13792537 NCBI chr 9:82,669,199...82,673,898
Ensembl chr 9:82,669,204...82,673,898
JBrowse link
G Chpf2 chondroitin polymerizing factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:7,108,461...7,113,940
Ensembl chr 4:7,108,462...7,113,919
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 ISO (PMID:11056388)
MGI:MGI:1926002 (MGI:MGI:1354846|PMID:10722746), (MGI:MGI:4941099|PMID:21138417)
RGD PMID:10722746, PMID:11056388, PMID:21138417 MGI:MGI:1354846, MGI:MGI:4941099 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
JBrowse link
G Chst12 carbohydrate sulfotransferase 12 ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:16,199,975...16,218,404
Ensembl chr12:16,200,019...16,201,632
JBrowse link
G Chst13 carbohydrate sulfotransferase 13 ISO (PMID:12080076) RGD PMID:12080076 NCBI chr 4:122,223,846...122,244,848
Ensembl chr 4:122,224,535...122,237,754
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:MGI:2176247 (MGI:MGI:1206144|PMID:9597547), (MGI:MGI:2156294|PMID:11696535)
(PMID:9883891)
Ensembl
RGD
PMID:9597547, PMID:9883891, PMID:11696535, PMID:21873635 GO_REF:0000107, MGI:MGI:1206144, MGI:MGI:2156294, RGD:13792537 NCBI chr20:29,731,828...29,768,656
Ensembl chr20:29,731,816...29,738,506
JBrowse link
G Chst7 carbohydrate sulfotransferase 7 ISO
IBA
(PMID:10781596)
PMID:21873635
RGD PMID:10781596, PMID:21873635 RGD:13792537 NCBI chr  X:2,623,018...2,657,155
Ensembl chr  X:2,623,024...2,657,155
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 ISO
IBA
(PMID:11514575)
PMID:21873635
MGI:MGI:106576 (MGI:MGI:5462286|PMID:22952769)
RGD PMID:11514575, PMID:22952769, PMID:21873635 MGI:MGI:5462286, RGD:13792537 NCBI chr 1:127,010,587...127,071,570
Ensembl chr 1:127,010,588...127,071,570
JBrowse link
G Chsy3 chondroitin sulfate synthase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:54,243,626...54,497,475
Ensembl chr18:54,243,949...54,496,585
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO
IBA
(PMID:11514575), (PMID:12163485)
PMID:21873635
RGD PMID:11514575, PMID:12163485, PMID:21873635 RGD:13792537 NCBI chr16:22,704,318...23,075,071
Ensembl chr16:22,979,444...23,074,798
JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:150,148,626...150,185,062
Ensembl chr 4:150,153,844...150,185,044
JBrowse link
G Slc35d1 solute carrier family 35 member D1 ISO MGI:MGI:3774133 (MGI:MGI:3771453|PMID:17952091) RGD PMID:17952091 MGI:MGI:3771453 NCBI chr 5:122,700,396...122,746,815
Ensembl chr 5:122,699,587...122,746,839
JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:2675908|PMID:14505572)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14505572 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2675908 NCBI chr14:44,479,614...44,502,845
Ensembl chr14:44,479,614...44,502,845
JBrowse link
G Xylt1 xylosyltransferase 1 IEA
ISO
GO_REF:0000041
(MGI:MGI:5544658|PMID:24161523)
UniProt
RGD
PMID:24161523 GO_REF:0000041, MGI:MGI:5544658 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
G Xylt2 xylosyltransferase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:82,386,003...82,399,485
Ensembl chr10:82,386,005...82,399,485
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      cellular metabolic process 11085
        cellular biosynthetic process 6060
          sulfur compound biosynthetic process 108
            chondroitin sulfate biosynthetic process 16
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      organic substance metabolic process 11651
        organic substance biosynthetic process 6117
          macromolecule biosynthetic process 5156
            cellular macromolecule biosynthetic process 5074
              glycoprotein biosynthetic process 296
                proteoglycan biosynthetic process 52
                  chondroitin sulfate proteoglycan biosynthetic process 22
                    chondroitin sulfate biosynthetic process 16
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.