Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:myofibril assembly
go back to main search page
Accession:GO:0030239 term browser browse the term
Definition:Formation of myofibrils, the repeating units of striated muscle.


show annotations for term's descendants       view all columns           Sort by:
 
myofibril assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Capn3 calpain 3 JBrowse link 3 112,227,486 112,278,408 RGD:1624291
RGD:1600115
G Klhl41 kelch-like family member 41 JBrowse link 3 55,910,177 55,923,303 RGD:1624291
RGD:1600115
G Lmod1 leiomodin 1 JBrowse link 13 52,147,099 52,189,835 RGD:13792537
G Lmod2 leiomodin 2 JBrowse link 4 51,553,439 51,561,135 RGD:13792537
G Lmod3 leiomodin 3 JBrowse link 4 129,604,378 129,619,136 RGD:13792537
G Myh10 myosin heavy chain 10 JBrowse link 10 55,274,910 55,406,738 RGD:1624291
G Myh6 myosin heavy chain 6 JBrowse link 15 33,605,653 33,629,730 RGD:1624291
G Neurl2 neuralized E3 ubiquitin protein ligase 2 JBrowse link 3 161,296,303 161,299,024 RGD:1624291
G Pgm5 phosphoglucomutase 5 JBrowse link 1 242,582,591 242,765,837 RGD:13792537
G Tmod1 tropomodulin 1 JBrowse link 5 61,635,244 61,712,052 RGD:1624291
RGD:13792537
RGD:1600115
G Tmod2 tropomodulin 2 JBrowse link 8 82,505,947 82,547,450 RGD:13792537
G Tmod3 tropomodulin 3 JBrowse link 8 82,432,165 82,492,243 RGD:13792537
G Tmod4 tropomodulin 4 JBrowse link 2 196,294,990 196,299,896 RGD:13792537
cardiac muscle thin filament assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Neb nebulin JBrowse link 3 37,658,081 37,855,843 RGD:13792537
G Nebl nebulette JBrowse link 17 84,141,014 84,247,038 RGD:1600115
RGD:13792537
RGD:1624291
G Nrap nebulin-related anchoring protein JBrowse link 1 277,104,519 277,181,397 RGD:13792537
cardiac myofibril assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actc1 actin, alpha, cardiac muscle 1 JBrowse link 3 105,507,403 105,512,939 RGD:1624291
G Csrp3 cysteine and glycine rich protein 3 JBrowse link 1 104,147,205 104,166,389 RGD:1624291
RGD:1600115
G Fhod3 formin homology 2 domain containing 3 JBrowse link 18 16,650,786 17,332,209 RGD:1624291
G Myh10 myosin heavy chain 10 JBrowse link 10 55,274,910 55,406,738 RGD:1624291
RGD:1600115
G Myl2 myosin light chain 2 JBrowse link 12 39,951,863 39,959,065 RGD:1624291
RGD:1600115
G Mylk3 myosin light chain kinase 3 JBrowse link 19 27,388,163 27,442,451 RGD:8554371
RGD:13792537
G Myom1 myomesin 1 JBrowse link 9 119,353,840 119,469,196 RGD:13792537
G Myom2 myomesin 2 JBrowse link 16 79,587,136 79,672,871 RGD:13792537
G Myom3 myomesin 3 JBrowse link 5 154,109,293 154,159,943 RGD:13792537
G Pdgfra platelet derived growth factor receptor alpha JBrowse link 14 35,527,926 35,581,130 RGD:1600115
RGD:1624291
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:1624291
RGD:1600115
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
G Tcap titin-cap JBrowse link 10 86,337,705 86,338,414 RGD:1624291
RGD:13792537
G Ttn titin JBrowse link 3 63,565,160 63,837,815 RGD:1624291
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:1624291
RGD:1600115
negative regulation of sarcomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cav3 caveolin 3 JBrowse link 4 144,382,945 144,398,919 RGD:1624291
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:13204833
positive regulation of sarcomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp10 bone morphogenetic protein 10 JBrowse link 4 119,224,906 119,230,534 RGD:1624291
RGD:1600115
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:1624291
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:2312280
G Mylk3 myosin light chain kinase 3 JBrowse link 19 27,388,163 27,442,451 RGD:8554371
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1624291
regulation of sarcomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap13 A-kinase anchoring protein 13 JBrowse link 1 137,089,558 137,315,272 RGD:1624291
RGD:1600115
G Ankrd23 ankyrin repeat domain 23 JBrowse link 9 43,110,980 43,117,585 RGD:1624291
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:1624291
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1624291
RGD:1600115
sarcomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actg1 actin, gamma 1 JBrowse link 10 109,518,429 109,521,288 RGD:1624291
G Actn1 actinin, alpha 1 JBrowse link 6 103,376,557 103,470,497 RGD:1600115
G Actn2 actinin alpha 2 JBrowse link 17 66,304,530 66,397,647 RGD:1624291
G Bmp10 bone morphogenetic protein 10 JBrowse link 4 119,224,906 119,230,534 RGD:2302083
G Capn3 calpain 3 JBrowse link 3 112,227,486 112,278,408 RGD:1624291
RGD:1600115
G Capn9 calpain 9 JBrowse link 19 57,341,938 57,378,901 RGD:1600115
G Casq1 calsequestrin 1 JBrowse link 13 90,592,676 90,602,365 RGD:1624291
RGD:1600115
G Casq2 calsequestrin 2 JBrowse link 2 204,512,361 204,568,643 RGD:1600115
RGD:1624291
G Cfl2 cofilin 2 JBrowse link 6 75,759,140 75,763,185 RGD:1624291
G Csrp1 cysteine and glycine-rich protein 1 JBrowse link 13 52,553,843 52,575,054 RGD:13792537
G Csrp3 cysteine and glycine rich protein 3 JBrowse link 1 104,147,205 104,166,389 RGD:13792537
G Fhod3 formin homology 2 domain containing 3 JBrowse link 18 16,650,786 17,332,209 RGD:1624291
RGD:8554207
G Foxp1 forkhead box P1 JBrowse link 4 131,362,178 131,963,466 RGD:1624291
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1624291
RGD:1600115
G Klhl41 kelch-like family member 41 JBrowse link 3 55,910,177 55,923,303 RGD:1600115
G Krt19 keratin 19 JBrowse link 10 88,055,843 88,060,560 RGD:1624291
G Krt8 keratin 8 JBrowse link 7 143,596,511 143,603,745 RGD:1600063
G Ldb3 LIM domain binding 3 JBrowse link 16 10,878,348 10,943,016 RGD:1624291
G Lmod2 leiomodin 2 JBrowse link 4 51,553,439 51,561,135 RGD:11344939
RGD:1624291
G Mybpc3 myosin binding protein C3 JBrowse link 3 79,940,509 79,958,731 RGD:1624291
G Myh6 myosin heavy chain 6 JBrowse link 15 33,605,653 33,629,730 RGD:1624291
RGD:1600115
G Mylk3 myosin light chain kinase 3 JBrowse link 19 27,388,163 27,442,451 RGD:8554765
RGD:13792537
RGD:1624291
G Myom1 myomesin 1 JBrowse link 9 119,353,840 119,469,196 RGD:13792537
G Myom2 myomesin 2 JBrowse link 16 79,587,136 79,672,871 RGD:13792537
G Myom3 myomesin 3 JBrowse link 5 154,109,293 154,159,943 RGD:13792537
G Myoz1 myozenin 1 JBrowse link 15 4,077,066 4,084,306 RGD:1624291
G Myoz2 myozenin 2 JBrowse link 2 227,180,887 227,207,629 RGD:1624291
G Mypn myopalladin JBrowse link 20 26,988,820 27,074,106 RGD:1624291
G Neurl2 neuralized E3 ubiquitin protein ligase 2 JBrowse link 3 161,296,303 161,299,024 RGD:1624291
G Nkx2-5 NK2 homeobox 5 JBrowse link 10 16,635,989 16,638,758 RGD:1600115
RGD:1624291
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 10 97,940,705 97,959,199 RGD:1624291
G Six4 SIX homeobox 4 JBrowse link 6 95,984,868 95,999,709 RGD:1624291
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
G Synpo2l synaptopodin 2-like JBrowse link 15 4,064,706 4,074,151 RGD:1624291
G Tcap titin-cap JBrowse link 10 86,337,705 86,338,414 RGD:1624291
RGD:1600115
G Tnnt1 troponin T1, slow skeletal type JBrowse link 1 72,889,270 72,899,629 RGD:13792537
G Tnnt2 troponin T2, cardiac type JBrowse link 13 52,662,974 52,680,992 RGD:1624291
RGD:13792537
G Tnnt3 troponin T3, fast skeletal type JBrowse link 1 215,666,628 215,683,628 RGD:13792537
G Tpm1 tropomyosin 1 JBrowse link 8 72,814,737 72,841,496 RGD:1624291
RGD:1600115
G Ttn titin JBrowse link 3 63,565,160 63,837,815 RGD:634444
RGD:1624291
G Wdr1 WD repeat domain 1 JBrowse link 14 76,990,014 77,023,739 RGD:1624291
RGD:13792537
G Xirp1 xin actin-binding repeat containing 1 JBrowse link 8 128,694,809 128,712,092 RGD:1624291
sarcomerogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mylk3 myosin light chain kinase 3 JBrowse link 19 27,388,163 27,442,451 RGD:8554371
G Tcap titin-cap JBrowse link 10 86,337,705 86,338,414 RGD:1624291
RGD:13792537
G Ttn titin JBrowse link 3 63,565,160 63,837,815 RGD:1624291
skeletal muscle myosin thick filament assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myom1 myomesin 1 JBrowse link 9 119,353,840 119,469,196 RGD:13792537
G Myom2 myomesin 2 JBrowse link 16 79,587,136 79,672,871 RGD:13792537
G Myom3 myomesin 3 JBrowse link 5 154,109,293 154,159,943 RGD:13792537
G Tcap titin-cap JBrowse link 10 86,337,705 86,338,414 RGD:1624291
RGD:13792537
G Tmod1 tropomodulin 1 JBrowse link 5 61,635,244 61,712,052 RGD:1624291
G Ttn titin JBrowse link 3 63,565,160 63,837,815 RGD:1624291
skeletal muscle thin filament assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acta1 actin, alpha 1, skeletal muscle JBrowse link 19 56,674,072 56,677,084 RGD:1624291
RGD:13792537
RGD:1600115
G Actc1 actin, alpha, cardiac muscle 1 JBrowse link 3 105,507,403 105,512,939 RGD:1624291
G Lmod3 leiomodin 3 JBrowse link 4 129,604,378 129,619,136 RGD:1624291
G LOC102552318 actin-like JBrowse link 1 217,039,727 217,066,768 RGD:13792537
G Myom1 myomesin 1 JBrowse link 9 119,353,840 119,469,196 RGD:13792537
G Myom2 myomesin 2 JBrowse link 16 79,587,136 79,672,871 RGD:13792537
G Myom3 myomesin 3 JBrowse link 5 154,109,293 154,159,943 RGD:13792537
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1624291
G Tcap titin-cap JBrowse link 10 86,337,705 86,338,414 RGD:1624291
RGD:13792537
G Ttn titin JBrowse link 3 63,565,160 63,837,815 RGD:1624291
skeletal myofibril assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cflar CASP8 and FADD-like apoptosis regulator JBrowse link 9 65,534,608 65,586,395 RGD:1624291
striated muscle myosin thick filament assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myom1 myomesin 1 JBrowse link 9 119,353,840 119,469,196 RGD:13792537
G Myom2 myomesin 2 JBrowse link 16 79,587,136 79,672,871 RGD:13792537
G Myom3 myomesin 3 JBrowse link 5 154,109,293 154,159,943 RGD:13792537
ventricular cardiac myofibril assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mef2a myocyte enhancer factor 2a JBrowse link 1 128,207,715 128,341,681 RGD:1600115
RGD:1624291
G Nkx2-5 NK2 homeobox 5 JBrowse link 10 16,635,989 16,638,758 RGD:1624291
RGD:1600115
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19335
    developmental process 6638
      anatomical structure formation involved in morphogenesis 1189
        cellular component assembly involved in morphogenesis 122
          myofibril assembly 71
            cardiac myofibril assembly + 21
            muscle thin filament assembly 0
            sarcomere organization + 51
            sarcomerogenesis 3
            skeletal myofibril assembly + 12
            striated muscle myosin thick filament assembly + 6
            striated muscle paramyosin thick filament assembly 0
Path 2
Term Annotations click to browse term
  biological_process 19335
    developmental process 6638
      cellular developmental process 4415
        cell differentiation 4195
          cell development 2462
            muscle cell development 210
              striated muscle cell development 198
                myofibril assembly 71
                  cardiac myofibril assembly + 21
                  muscle thin filament assembly 0
                  sarcomere organization + 51
                  sarcomerogenesis 3
                  skeletal myofibril assembly + 12
                  striated muscle myosin thick filament assembly + 6
                  striated muscle paramyosin thick filament assembly 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.