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ONTOLOGY REPORT - ANNOTATIONS


Term:transport vesicle membrane
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Accession:GO:0030658 term browser browse the term
Definition:The lipid bilayer surrounding a transport vesicle.
Synonyms:exact_synonym: constitutive secretory pathway transport vesicle membrane
 broad_synonym: secretory vesicle membrane


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transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CA4 carbonic anhydrase 4 JBrowse link 17 54,236,114 54,258,638 RGD:9068941
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CPLX3 complexin 3 JBrowse link 15 53,769,138 53,774,330 RGD:9068941
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 RGD:9068941
G LOC100977490 ras-related protein Rab-26 JBrowse link 16 1,006,847 1,012,263 RGD:9068941
G LOC100994374 uncharacterized LOC100994374 JBrowse link 12 117,670,697 117,672,876 RGD:9068941
G RAB10 RAB10, member RAS oncogene family JBrowse link 2A 26,034,046 26,132,658 RGD:9068941
G RAB11B RAB11B, member RAS oncogene family JBrowse link 19 7,676,095 7,690,177 RGD:9068941
G RAB14 RAB14, member RAS oncogene family JBrowse link 9 92,305,656 92,329,419 RGD:9068941
G RAB27B RAB27B, member RAS oncogene family JBrowse link 18 48,099,912 48,274,416 RGD:9068941
G RAB2A RAB2A, member RAS oncogene family JBrowse link 8 56,931,782 57,034,343 RGD:9068941
G RAB3A RAB3A, member RAS oncogene family JBrowse link 19 17,672,661 17,679,541 RGD:9068941
G RAB3B RAB3B, member RAS oncogene family JBrowse link 1 51,170,956 51,242,828 RGD:9068941
G RAB3C RAB3C, member RAS oncogene family JBrowse link 5 55,150,508 55,428,094 RGD:9068941
G RAB4A RAB4A, member RAS oncogene family JBrowse link 1 204,818,445 204,849,775 RGD:9068941
G RAB4B RAB4B, member RAS oncogene family JBrowse link 19 37,821,564 37,840,257 RGD:9068941
G RAB5A RAB5A, member RAS oncogene family JBrowse link 3 19,866,110 19,903,701 RGD:9068941
G RAB5B RAB5B, member RAS oncogene family JBrowse link 12 32,916,314 32,939,047 RGD:9068941
G RAB5C RAB5C, member RAS oncogene family JBrowse link 17 15,160,965 15,190,840 RGD:9068941
G RAB7A RAB7A, member RAS oncogene family JBrowse link 3 125,784,604 125,873,051 RGD:9068941
G SYN1 synapsin I JBrowse link X 40,007,777 40,055,801 RGD:9068941
AP-1 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AFTPH aftiphilin JBrowse link 2A 64,591,970 64,659,953 RGD:9068941
G SLC18A3 solute carrier family 18 member A3 JBrowse link 10 44,630,006 44,632,419 RGD:9068941
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNM1L dynamin 1 like JBrowse link 12 53,476,553 53,541,421 RGD:9068941
G SYNRG synergin gamma JBrowse link 17 19,467,539 19,560,618 RGD:9068941
COPII vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KLHL12 kelch like family member 12 JBrowse link 1 178,490,467 178,527,919 RGD:9068941
G PDCD6 programmed cell death 6 JBrowse link 5 250,025 291,055 RGD:9068941
G PEF1 penta-EF-hand domain containing 1 JBrowse link 1 30,913,773 30,929,066 RGD:9068941
G SAR1A secretion associated Ras related GTPase 1A JBrowse link 10 66,623,355 66,643,354 RGD:9068941
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 3 10,237,101 10,257,694 RGD:9068941
G SEC23A Sec23 homolog A, COPII coat complex component JBrowse link 14 19,802,612 19,873,076 RGD:9068941
G SEC24A SEC24 homolog A, COPII coat complex component JBrowse link 5 130,050,625 130,128,212 RGD:9068941
G SEC24B SEC24 homolog B, COPII coat complex component JBrowse link 4 101,937,119 102,043,038 RGD:9068941
G SEC24C SEC24 homolog C, COPII coat complex component JBrowse link 10 70,267,194 70,295,116 RGD:9068941
G SEC24D SEC24 homolog D, COPII coat complex component JBrowse link 4 110,916,508 111,033,298 RGD:9068941
G SEC31A SEC31 homolog A, COPII coat complex component JBrowse link 4 41,312,389 41,384,924 RGD:9068941
ER to Golgi transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SEC22B SEC22 homolog B, vesicle trafficking protein JBrowse link 1 82,383,313 82,404,612 RGD:9068941
G SEC23A Sec23 homolog A, COPII coat complex component JBrowse link 14 19,802,612 19,873,076 RGD:9068941
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMPH amphiphysin JBrowse link 7 39,015,699 39,262,120 RGD:9068941
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 JBrowse link 2A 71,000,096 71,030,306 RGD:9068941
G BIN1 bridging integrator 1 JBrowse link 2B 33,168,767 33,228,075 RGD:9068941
G CLTC clathrin heavy chain JBrowse link 17 53,685,865 53,761,008 RGD:9068941
G DOC2A double C2 domain alpha RGD:9068941
G RPH3A rabphilin 3A JBrowse link 12 110,393,495 110,504,099 RGD:9068941
G SGTA small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 19 1,778,728 1,808,199 RGD:9068941
G SYN1 synapsin I JBrowse link X 40,007,777 40,055,801 RGD:9068941
G SYN2 synapsin II JBrowse link 3 11,935,680 12,118,981 RGD:9068941
G SYN3 synapsin III JBrowse link 22 13,517,932 14,069,661 RGD:9068941
integral component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 JBrowse link 17 14,793,717 14,857,706 RGD:9068941
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 JBrowse link 6 31,205,541 31,207,930 RGD:9068941
G ATP8A1 ATPase phospholipid transporting 8A1 JBrowse link 4 36,729,820 36,978,825 RGD:9068941
G CLCN3 chloride voltage-gated channel 3 JBrowse link 4 161,838,061 161,943,072 RGD:9068941
G GABRA2 gamma-aminobutyric acid type A receptor subunit alpha2 JBrowse link 4 75,762,568 75,913,708 RGD:9068941
G LAMP1 lysosomal associated membrane protein 1 JBrowse link 13 94,442,507 94,464,061 RGD:9068941
G MAL2 mal, T cell differentiation protein 2 JBrowse link 8 115,894,617 115,935,359 RGD:9068941
G OPRD1 opioid receptor delta 1 JBrowse link 1 28,068,053 28,143,053 RGD:9068941
G OPRK1 opioid receptor kappa 1 JBrowse link 8 49,650,844 49,677,494 RGD:9068941
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 7 149,158,513 150,390,077 RGD:9068941
G PTPRS protein tyrosine phosphatase receptor type S JBrowse link 19 4,227,038 4,361,958 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 5 36,829,770 36,951,827 RGD:9068941
G SCAMP5 secretory carrier membrane protein 5 JBrowse link 15 53,935,756 53,961,611 RGD:9068941
G SLC10A4 solute carrier family 10 member 4 JBrowse link 4 73,663,681 73,669,852 RGD:9068941
G SLC17A6 solute carrier family 17 member 6 JBrowse link 11 22,350,537 22,392,009 RGD:9068941
G SLC17A7 solute carrier family 17 member 7 JBrowse link 19 46,443,076 46,455,195 RGD:9068941
G SLC17A8 solute carrier family 17 member 8 JBrowse link 12 97,935,177 98,001,240 RGD:9068941
G SLC18A2 solute carrier family 18 member A2 JBrowse link 10 113,823,005 113,862,451 RGD:9068941
G SLC18A3 solute carrier family 18 member A3 JBrowse link 10 44,630,006 44,632,419 RGD:9068941
G SLC30A3 solute carrier family 30 member 3 JBrowse link 2A 27,255,944 27,276,720 RGD:9068941
G SLC32A1 solute carrier family 32 member 1 JBrowse link 20 35,049,115 35,054,347 RGD:9068941
G SLC6A17 solute carrier family 6 member 17 JBrowse link 1 112,801,302 112,852,916 RGD:9068941
G SLC6A7 solute carrier family 6 member 7 JBrowse link 5 145,614,286 145,635,345 RGD:9068941
G SLC6A9 solute carrier family 6 member 9 JBrowse link 1 43,298,326 43,333,345 RGD:9068941
G STX12 syntaxin 12 JBrowse link 1 27,035,807 27,086,825 RGD:9068941
G STX16 syntaxin 16 JBrowse link 20 54,999,514 55,027,787 RGD:9068941
G STX1A syntaxin 1A RGD:9068941
G STX6 syntaxin 6 JBrowse link 1 156,450,202 156,500,143 RGD:9068941
G STX7 syntaxin 7 JBrowse link 6 130,232,041 130,289,326 RGD:9068941
G SV2A synaptic vesicle glycoprotein 2A JBrowse link 1 125,247,429 125,262,041 RGD:9068941
G SV2B synaptic vesicle glycoprotein 2B JBrowse link 15 69,793,642 69,989,339 RGD:9068941
G SV2C synaptic vesicle glycoprotein 2C JBrowse link 5 38,969,056 39,222,300 RGD:9068941
G SYNGR1 synaptogyrin 1 JBrowse link 22 20,253,936 20,289,470 RGD:9068941
G SYNPR synaptoporin JBrowse link 3 63,186,196 63,523,267 RGD:9068941
G SYP synaptophysin JBrowse link X 41,487,538 41,500,039 RGD:9068941
G SYPL1 synaptophysin like 1 JBrowse link 7 98,074,940 98,097,052 RGD:9068941
G SYT1 synaptotagmin 1 JBrowse link 12 76,392,955 76,981,800 RGD:9068941
G SYT11 synaptotagmin 11 JBrowse link 1 131,193,999 131,218,752 RGD:9068941
G SYT2 synaptotagmin 2 JBrowse link 1 178,187,872 178,308,522 RGD:9068941
G SYT9 synaptotagmin 9 JBrowse link 11 7,350,612 7,565,272 RGD:9068941
G TMEM163 transmembrane protein 163 JBrowse link 2B 25,138,333 25,393,295 RGD:9068941
G VAMP1 vesicle associated membrane protein 1 JBrowse link 12 6,592,688 6,601,317 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 17 43,495,464 43,499,348 RGD:9068941
G VAMP3 vesicle associated membrane protein 3 JBrowse link 1 6,534,115 6,544,275 RGD:9068941
G VAMP4 vesicle associated membrane protein 4 JBrowse link 1 147,192,001 147,233,945 RGD:9068941
G VAMP7 vesicle associated membrane protein 7 JBrowse link X 145,362,432 145,425,097 RGD:9068941
G WFS1 wolframin ER transmembrane glycoprotein RGD:9068941
synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCC8 ATP binding cassette subfamily C member 8 JBrowse link 11 17,447,564 17,531,513 RGD:9068941
G BCL2L1 BCL2 like 1 JBrowse link 20 27,955,688 28,015,950 RGD:9068941
G C16H16orf70 chromosome 16 C16orf70 homolog JBrowse link 16 47,455,363 47,494,241 RGD:9068941
G CALM1 calmodulin 1 JBrowse link 14 71,015,099 71,026,322 RGD:9068941
G CALM2 calmodulin 2 JBrowse link 2A 47,274,722 47,290,861 RGD:9068941
G CALM3 calmodulin 3 JBrowse link 19 43,593,069 43,602,550 RGD:9068941
G CLTA clathrin light chain A JBrowse link 9 36,040,566 36,061,744 RGD:9068941
G CLTB clathrin light chain B JBrowse link 5 171,689,273 171,713,198 RGD:9068941
G DLG2 discs large MAGUK scaffold protein 2 JBrowse link 11 78,517,601 80,684,319 RGD:9068941
G DMD dystrophin JBrowse link X 23,728,650 26,338,849 RGD:9068941
G DNM1L dynamin 1 like JBrowse link 12 53,476,553 53,541,421 RGD:9068941
G DRD2 dopamine receptor D2 JBrowse link 11 108,289,838 108,357,174 RGD:9068941
G DTNBP1 dystrobrevin binding protein 1 JBrowse link 6 15,377,263 15,523,317 RGD:9068941
G GAD2 glutamate decarboxylase 2 JBrowse link 10 26,392,877 26,481,859 RGD:9068941
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 5 148,879,996 149,206,914 RGD:9068941
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 4 149,566,563 149,712,135 RGD:9068941
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 9 108,198,350 108,228,887 RGD:9068941
G ICA1 islet cell autoantigen 1 JBrowse link 7 8,838,319 8,992,433 RGD:9068941
G MCTP1 multiple C2 and transmembrane domain containing 1 JBrowse link 5 20,071,072 20,669,826 RGD:9068941
G MFF mitochondrial fission factor JBrowse link 2B 114,569,893 114,602,158 RGD:9068941
G OTOF otoferlin JBrowse link 2A 26,454,010 26,555,642 RGD:9068941
G PI4K2A phosphatidylinositol 4-kinase type 2 alpha JBrowse link 10 94,261,096 94,293,358 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G PRRT1 proline rich transmembrane protein 1 JBrowse link 6 31,795,267 31,798,873 RGD:9068941
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 7 149,158,513 150,390,077 RGD:9068941
G RPH3A rabphilin 3A JBrowse link 12 110,393,495 110,504,099 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 5 36,829,770 36,951,827 RGD:9068941
G SEMA4C semaphorin 4C JBrowse link 2A 102,443,333 102,455,176 RGD:9068941
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 9 17,386,298 17,605,722 RGD:9068941
G SLC17A7 solute carrier family 17 member 7 JBrowse link 19 46,443,076 46,455,195 RGD:9068941
G SLC17A8 solute carrier family 17 member 8 JBrowse link 12 97,935,177 98,001,240 RGD:9068941
G SLC18A2 solute carrier family 18 member A2 JBrowse link 10 113,823,005 113,862,451 RGD:9068941
G SLC30A3 solute carrier family 30 member 3 JBrowse link 2A 27,255,944 27,276,720 RGD:9068941
G SLC9B2 solute carrier family 9 member B2 JBrowse link 4 95,474,854 95,532,311 RGD:9068941
G SNAP47 synaptosome associated protein 47 JBrowse link 1 203,128,827 203,181,521 RGD:9068941
G SNCA synuclein alpha JBrowse link 4 82,018,585 82,132,938 RGD:9068941
G STX1A syntaxin 1A RGD:9068941
G SV2A synaptic vesicle glycoprotein 2A JBrowse link 1 125,247,429 125,262,041 RGD:9068941
G SYN1 synapsin I JBrowse link X 40,007,777 40,055,801 RGD:9068941
G SYN2 synapsin II JBrowse link 3 11,935,680 12,118,981 RGD:9068941
G SYN3 synapsin III JBrowse link 22 13,517,932 14,069,661 RGD:9068941
G SYNDIG1 synapse differentiation inducing 1 JBrowse link 20 24,402,471 24,629,365 RGD:9068941
G SYNGR1 synaptogyrin 1 JBrowse link 22 20,253,936 20,289,470 RGD:9068941
G SYNGR2 synaptogyrin 2 JBrowse link 17 72,245,844 72,250,031 RGD:9068941
G SYP synaptophysin JBrowse link X 41,487,538 41,500,039 RGD:9068941
G SYT1 synaptotagmin 1 JBrowse link 12 76,392,955 76,981,800 RGD:9068941
G TRPM7 transient receptor potential cation channel subfamily M member 7 JBrowse link 15 29,513,220 29,639,506 RGD:9068941
G UNC13C unc-13 homolog C JBrowse link 15 32,914,784 33,563,610 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 17 43,495,464 43,499,348 RGD:9068941
trans-Golgi network transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NRGN neurogranin JBrowse link 11 119,566,934 119,574,248 RGD:9068941
G RASSF9 Ras association domain family member 9 JBrowse link 12 83,331,750 83,367,348 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12607
    cellular anatomical entity 12424
      membrane 4868
        whole membrane 994
          transport vesicle membrane 125
            ER to Golgi transport vesicle membrane + 12
            Golgi to ER transport vesicle membrane 0
            clathrin-sculpted acetylcholine transport vesicle membrane 0
            clathrin-sculpted glutamate transport vesicle membrane 0
            clathrin-sculpted monoamine transport vesicle membrane 0
            cytoplasmic side of transport vesicle membrane + 0
            exocytic vesicle membrane + 108
            inter-Golgi transport vesicle membrane 0
            lumenal side of transport vesicle membrane + 0
            trans-Golgi network transport vesicle membrane + 6
Path 2
Term Annotations click to browse term
  cellular_component 12607
    cellular anatomical entity 12424
      organelle 9687
        membrane-bounded organelle 8601
          vesicle 1580
            intracellular vesicle 1448
              cytoplasmic vesicle 1443
                cytoplasmic vesicle membrane 273
                  transport vesicle membrane 125
                    ER to Golgi transport vesicle membrane + 12
                    Golgi to ER transport vesicle membrane 0
                    clathrin-sculpted acetylcholine transport vesicle membrane 0
                    clathrin-sculpted glutamate transport vesicle membrane 0
                    clathrin-sculpted monoamine transport vesicle membrane 0
                    cytoplasmic side of transport vesicle membrane + 0
                    exocytic vesicle membrane + 108
                    inter-Golgi transport vesicle membrane 0
                    lumenal side of transport vesicle membrane + 0
                    trans-Golgi network transport vesicle membrane + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.