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ONTOLOGY REPORT - ANNOTATIONS


Term:transport vesicle membrane
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Accession:GO:0030658 term browser browse the term
Definition:The lipid bilayer surrounding a transport vesicle.
Synonyms:exact_synonym: constitutive secretory pathway transport vesicle membrane
 broad_synonym: secretory vesicle membrane


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transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ca4 carbonic anhydrase 4 JBrowse link NW_004955451 1,485,939 1,493,249 RGD:9068941
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cplx3 complexin 3 JBrowse link NW_004955450 3,105,364 3,110,246 RGD:9068941
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004955528 317,891 366,299 RGD:9068941
G Rab10 RAB10, member RAS oncogene family JBrowse link NW_004955469 8,057,235 8,138,983 RGD:9068941
G Rab11b RAB11B, member RAS oncogene family JBrowse link NW_004955563 1,008,267 1,017,315 RGD:9068941
G Rab14 RAB14, member RAS oncogene family JBrowse link NW_004955419 6,790,110 6,812,870 RGD:9068941
G Rab26 RAB26, member RAS oncogene family JBrowse link NW_004955442 15,114,333 15,119,481 RGD:9068941
G Rab27b RAB27B, member RAS oncogene family JBrowse link NW_004955402 39,357,500 39,415,530 RGD:9068941
G Rab2a RAB2A, member RAS oncogene family JBrowse link NW_004955444 18,091,640 18,169,971 RGD:9068941
G Rab35 RAB35, member RAS oncogene family JBrowse link NW_004955455 11,484,557 11,502,630 RGD:9068941
G Rab3a RAB3A, member RAS oncogene family JBrowse link NW_004955524 3,220,108 3,224,376 RGD:9068941
G Rab3b RAB3B, member RAS oncogene family JBrowse link NW_004955464 7,117,908 7,177,138 RGD:9068941
G Rab3c RAB3C, member RAS oncogene family JBrowse link NW_004955446 9,335,298 9,577,919 RGD:9068941
G Rab4a RAB4A, member RAS oncogene family JBrowse link NW_004955492 8,715,252 8,743,432 RGD:9068941
G Rab4b RAB4B, member RAS oncogene family JBrowse link NW_004955578 559,029 568,966 RGD:9068941
G Rab5a RAB5A, member RAS oncogene family JBrowse link NW_004955430 11,991,548 12,040,003 RGD:9068941
G Rab5b RAB5B, member RAS oncogene family JBrowse link NW_004955458 3,563,363 3,582,620 RGD:9068941
G Rab5c RAB5C, member RAS oncogene family JBrowse link NW_004955451 16,200,442 16,215,583 RGD:9068941
G Rab7a RAB7A, member RAS oncogene family JBrowse link NW_004955429 15,103,792 15,167,498 RGD:9068941
G Syn1 synapsin I JBrowse link NW_004955516 460,258 521,484 RGD:9068941
AP-1 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aftph aftiphilin JBrowse link NW_004955424 19,835,911 19,899,878 RGD:9068941
G Slc18a3 solute carrier family 18 member A3 JBrowse link NW_004955556 696,779 698,869 RGD:9068941
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1l dynamin 1 like JBrowse link NW_004955505 3,025,742 3,081,491 RGD:9068941
G Synrg synergin gamma JBrowse link NW_004955451 439,205 510,675 RGD:9068941
COPII vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Klhl12 kelch like family member 12 JBrowse link NW_004955406 38,903,233 38,931,756 RGD:9068941
G Pdcd6 programmed cell death 6 JBrowse link NW_004955504 75,378 94,654 RGD:9068941
G Pef1 penta-EF-hand domain containing 1 JBrowse link NW_004955452 10,038,380 10,055,871 RGD:9068941
G Sar1a secretion associated Ras related GTPase 1A JBrowse link NW_004955437 21,075,632 21,093,608 RGD:9068941
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link NW_004955561 1,707,053 1,723,715 RGD:9068941
G Sec23a Sec23 homolog A, COPII coat complex component JBrowse link NW_004955409 22,192,549 22,243,090 RGD:9068941
G Sec24a SEC24 homolog A, COPII coat complex component JBrowse link NW_004955408 5,803,438 5,850,879 RGD:9068941
G Sec24b SEC24 homolog B, COPII coat complex component JBrowse link NW_004955496 666,728 732,829 RGD:9068941
G Sec24c SEC24 homolog C, COPII coat complex component JBrowse link NW_004955437 18,132,969 18,161,167 RGD:9068941
G Sec24d SEC24 homolog D, COPII coat complex component JBrowse link NW_004955428 21,381,809 21,475,329 RGD:9068941
G Sec31a SEC31 homolog A, COPII coat complex component JBrowse link NW_004955433 6,830,732 6,891,259 RGD:9068941
ER to Golgi transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sec22b SEC22 homolog B, vesicle trafficking protein JBrowse link NW_004955568 1,559,519 1,587,782 RGD:9068941
G Sec23a Sec23 homolog A, COPII coat complex component JBrowse link NW_004955409 22,192,549 22,243,090 RGD:9068941
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amph amphiphysin JBrowse link NW_004955460 4,804,400 5,024,312 RGD:9068941
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 JBrowse link NW_004955424 14,256,096 14,281,572 RGD:9068941
G Bin1 bridging integrator 1 JBrowse link NW_004955459 3,376,149 3,423,157 RGD:9068941
G Cltc clathrin heavy chain JBrowse link NW_004955451 3,380,304 3,445,973 RGD:9068941
G Doc2a double C2 domain alpha JBrowse link NW_004955493 6,948,089 6,953,835 RGD:9068941
G Rph3a rabphilin 3A JBrowse link NW_004955482 9,190,137 9,312,596 RGD:9068941
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link NW_004955495 5,025,038 5,051,810 RGD:9068941
G Syn1 synapsin I JBrowse link NW_004955516 460,258 521,484 RGD:9068941
G Syn2 synapsin II JBrowse link NW_004955429 14,676,286 14,724,625 RGD:9068941
G Syn3 synapsin III JBrowse link NW_004955405 41,450,081 41,762,894 RGD:9068941
integral component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link NW_004955451 16,396,287 16,442,596 RGD:9068941
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 JBrowse link NW_004955437 86,053 88,355 RGD:9068941
G Atp8a1 ATPase phospholipid transporting 8A1 JBrowse link NW_004955443 5,142,049 5,362,031 RGD:9068941
G Clcn3 chloride voltage-gated channel 3 JBrowse link NW_004955403 36,625,871 36,710,201 RGD:9068941
G Gabra2 gamma-aminobutyric acid type A receptor alpha2 subunit JBrowse link NW_004955443 2,042,202 2,176,589 RGD:9068941
G Lamp1 lysosomal associated membrane protein 1 JBrowse link NW_004955404 557,090 573,532 RGD:9068941
G Mal2 mal, T cell differentiation protein 2 JBrowse link NW_004955417 25,069,847 25,096,132 RGD:9068941
G Oprd1 opioid receptor delta 1 JBrowse link NW_004955452 7,866,790 7,913,399 RGD:9068941
G Oprk1 opioid receptor kappa 1 JBrowse link NW_004955454 12,741,577 12,751,282 RGD:9068941
G Ptprn2 protein tyrosine phosphatase receptor type N2 JBrowse link NW_004955579 366,441 862,837 RGD:9068941
G Ptprs protein tyrosine phosphatase receptor type S JBrowse link NW_004955495 3,943,075 3,991,361 RGD:9068941
G Scamp1 secretory carrier membrane protein 1 JBrowse link NW_004955425 22,562,336 22,686,661 RGD:9068941
G Scamp5 secretory carrier membrane protein 5 JBrowse link NW_004955450 2,986,522 3,009,655 RGD:9068941
G Slc10a4 solute carrier family 10 member 4 JBrowse link NW_004955447 19,189,516 19,194,982 RGD:9068941
G Slc17a6 solute carrier family 17 member 6 JBrowse link NW_004955476 2,813,368 2,854,371 RGD:9068941
G Slc17a7 solute carrier family 17 member 7 JBrowse link NW_004955559 1,399,182 1,409,074 RGD:9068941
G Slc17a8 solute carrier family 17 member 8 JBrowse link NW_004955405 36,063,688 36,115,312 RGD:9068941
G Slc18a2 solute carrier family 18 member A2 JBrowse link NW_004955431 21,949,553 21,979,679 RGD:9068941
G Slc18a3 solute carrier family 18 member A3 JBrowse link NW_004955556 696,779 698,869 RGD:9068941
G Slc30a3 solute carrier family 30 member 3 JBrowse link NW_004955469 9,235,159 9,254,291 RGD:9068941
G Slc32a1 solute carrier family 32 member 1 JBrowse link NW_004955445 18,033,128 18,038,002 RGD:9068941
G Slc6a17 solute carrier family 6 member 17 JBrowse link NW_004955435 13,668,690 13,717,401 RGD:9068941
G Slc6a7 solute carrier family 6 member 7 JBrowse link NW_004955415 4,314,090 4,332,659 RGD:9068941
G Slc6a9 solute carrier family 6 member 9 JBrowse link NW_004955537 3,520,516 3,549,492 RGD:9068941
G Stx12 syntaxin 12 JBrowse link NW_004955452 6,977,813 7,015,281 RGD:9068941
G Stx16 syntaxin 16 JBrowse link NW_004955445 884,372 910,010 RGD:9068941
G Stx1a syntaxin 1A JBrowse link NW_004955456 14,030,233 14,046,456 RGD:9068941
G Stx6 syntaxin 6 JBrowse link NW_004955406 20,042,552 20,089,853 RGD:9068941
G Stx7 syntaxin 7 JBrowse link NW_004955436 12,928,274 12,975,745 RGD:9068941
G Sv2a synaptic vesicle glycoprotein 2A JBrowse link NW_004955413 834,743 849,176 RGD:9068941
G Sv2b synaptic vesicle glycoprotein 2B JBrowse link NW_004955416 19,456,414 19,650,782 RGD:9068941
G Sv2c synaptic vesicle glycoprotein 2C JBrowse link NW_004955425 24,489,304 24,682,555 RGD:9068941
G Syngr1 synaptogyrin 1 JBrowse link NW_004955413 25,244,679 25,269,725 RGD:9068941
G Synpr synaptoporin JBrowse link NW_004955517 2,261,080 2,442,271 RGD:9068941
G Syp synaptophysin JBrowse link NW_004955543 675,294 689,579 RGD:9068941
G Sypl1 synaptophysin like 1 JBrowse link NW_004955410 10,571,888 10,590,978 RGD:9068941
G Syt1 synaptotagmin 1 JBrowse link NW_004955405 17,840,012 18,372,156 RGD:9068941
G Syt11 synaptotagmin 11 JBrowse link NW_004955545 2,054,720 2,074,526 RGD:9068941
G Syt2 synaptotagmin 2 JBrowse link NW_004955406 38,638,192 38,743,077 RGD:9068941
G Syt9 synaptotagmin 9 JBrowse link NW_004955414 23,061,163 23,221,986 RGD:9068941
G Tmem163 transmembrane protein 163 JBrowse link NW_004955440 2,006,152 2,240,209 RGD:9068941
G Vamp1 vesicle associated membrane protein 1 JBrowse link NW_004955413 4,117,367 4,124,149 RGD:9068941
G Vamp2 vesicle associated membrane protein 2 JBrowse link NW_004955467 8,793,296 8,796,771 RGD:9068941
G Vamp3 vesicle associated membrane protein 3 JBrowse link NW_004955486 5,103,228 5,112,157 RGD:9068941
G Vamp4 vesicle associated membrane protein 4 JBrowse link NW_004955406 12,223,736 12,260,506 RGD:9068941
G Vamp7 vesicle associated membrane protein 7 JBrowse link NW_004955594 20,496 72,648 RGD:9068941
G Wfs1 wolframin ER transmembrane glycoprotein JBrowse link NW_004955514 3,902,508 3,924,281 RGD:9068941
synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link NW_004955414 32,216,243 32,289,028 RGD:9068941
G Bcl2l1 BCL2 like 1 JBrowse link NW_004955422 29,254,440 29,307,104 RGD:9068941
G Calm1 calmodulin 1 JBrowse link NW_004955438 12,842,437 12,854,028 RGD:9068941
G Calm2 calmodulin 2 JBrowse link NW_004955441 13,973,147 13,988,665 RGD:9068941
G Calm3 calmodulin 3 JBrowse link NW_004955574 672,441 680,924 RGD:9068941
G Clta clathrin light chain A JBrowse link NW_004955472 96,958 117,230 RGD:9068941
G Cltb clathrin light chain B JBrowse link NW_004955408 28,692,933 28,717,566 RGD:9068941
G Dlg2 discs large MAGUK scaffold protein 2 JBrowse link NW_004955414 7,247,248 9,171,664 RGD:9068941
G Dmd dystrophin JBrowse link NW_004955535 1,283,084 3,297,015 RGD:9068941
G Dnm1l dynamin 1 like JBrowse link NW_004955505 3,025,742 3,081,491 RGD:9068941
G Drd2 dopamine receptor D2 JBrowse link NW_004955412 15,054,255 15,114,558 RGD:9068941
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link NW_004955590 276,143 382,812 RGD:9068941
G Gad2 glutamate decarboxylase 2 JBrowse link NW_004955429 3,092,977 3,170,128 RGD:9068941
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link NW_004955408 7,912,223 8,226,241 RGD:9068941
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link NW_004955471 9,970,396 10,108,871 RGD:9068941
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link NW_004955513 5,154,864 5,178,636 RGD:9068941
G Ica1 islet cell autoantigen 1 JBrowse link NW_004955432 15,136,606 15,297,415 RGD:9068941
G LOC102016597 chromosome unknown open reading frame, human C16orf70 JBrowse link NW_004955484 9,466,880 9,491,176 RGD:9068941
G Mctp1 multiple C2 and transmembrane domain containing 1 JBrowse link NW_004955418 17,229,498 17,746,936 RGD:9068941
G Mff mitochondrial fission factor JBrowse link NW_004955453 7,221,244 7,256,029 RGD:9068941
G Otof otoferlin JBrowse link NW_004955469 8,480,099 8,569,215 RGD:9068941
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha JBrowse link NW_004955507 3,729,947 3,761,703 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Prrt1 proline rich transmembrane protein 1 JBrowse link NW_004955437 614,026 615,177 RGD:9068941
G Ptprn2 protein tyrosine phosphatase receptor type N2 JBrowse link NW_004955579 366,441 862,837 RGD:9068941
G Rph3a rabphilin 3A JBrowse link NW_004955482 9,190,137 9,312,596 RGD:9068941
G Scamp1 secretory carrier membrane protein 1 JBrowse link NW_004955425 22,562,336 22,686,661 RGD:9068941
G Sema4c semaphorin 4C JBrowse link NW_004955470 4,213,006 4,220,167 RGD:9068941
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link NW_004955434 20,332,727 20,381,320 RGD:9068941
G Slc17a7 solute carrier family 17 member 7 JBrowse link NW_004955559 1,399,182 1,409,074 RGD:9068941
G Slc17a8 solute carrier family 17 member 8 JBrowse link NW_004955405 36,063,688 36,115,312 RGD:9068941
G Slc18a2 solute carrier family 18 member A2 JBrowse link NW_004955431 21,949,553 21,979,679 RGD:9068941
G Slc30a3 solute carrier family 30 member 3 JBrowse link NW_004955469 9,235,159 9,254,291 RGD:9068941
G Slc9b2 solute carrier family 9 member B2 JBrowse link NW_004955496 5,532,113 5,587,801 RGD:9068941
G Snap47 synaptosome associated protein 47 JBrowse link NW_004955581 486,087 525,171 RGD:9068941
G Snca synuclein alpha JBrowse link NW_004955405 854,011 962,741 RGD:9068941
G Stx1a syntaxin 1A JBrowse link NW_004955456 14,030,233 14,046,456 RGD:9068941
G Sv2a synaptic vesicle glycoprotein 2A JBrowse link NW_004955413 834,743 849,176 RGD:9068941
G Syn1 synapsin I JBrowse link NW_004955516 460,258 521,484 RGD:9068941
G Syn2 synapsin II JBrowse link NW_004955429 14,676,286 14,724,625 RGD:9068941
G Syn3 synapsin III JBrowse link NW_004955405 41,450,081 41,762,894 RGD:9068941
G Syndig1 synapse differentiation inducing 1 JBrowse link NW_004955415 30,909,654 31,005,421 RGD:9068941
G Syngr1 synaptogyrin 1 JBrowse link NW_004955413 25,244,679 25,269,725 RGD:9068941
G Syngr2 synaptogyrin 2 JBrowse link NW_004955506 4,391,587 4,393,475 RGD:9068941
G Syp synaptophysin JBrowse link NW_004955543 675,294 689,579 RGD:9068941
G Syt1 synaptotagmin 1 JBrowse link NW_004955405 17,840,012 18,372,156 RGD:9068941
G Trpm7 transient receptor potential cation channel subfamily M member 7 JBrowse link NW_004955409 3,690,722 3,787,139 RGD:9068941
G Unc13c unc-13 homolog C JBrowse link NW_004955409 889,912 1,325,136 RGD:9068941
G Vamp2 vesicle associated membrane protein 2 JBrowse link NW_004955467 8,793,296 8,796,771 RGD:9068941
trans-Golgi network transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrgn neurogranin JBrowse link NW_004955412 25,809,512 25,818,237 RGD:9068941
G Rassf9 Ras association domain family member 9 JBrowse link NW_004955405 23,677,319 23,711,542 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 11974
    cellular anatomical entity 11806
      membrane 4688
        whole membrane 982
          transport vesicle membrane 125
            ER to Golgi transport vesicle membrane + 12
            Golgi to ER transport vesicle membrane 0
            clathrin-sculpted acetylcholine transport vesicle membrane 0
            clathrin-sculpted glutamate transport vesicle membrane 0
            clathrin-sculpted monoamine transport vesicle membrane 0
            cytoplasmic side of transport vesicle membrane + 0
            exocytic vesicle membrane + 108
            inter-Golgi transport vesicle membrane 0
            lumenal side of transport vesicle membrane + 0
            trans-Golgi network transport vesicle membrane + 6
Path 2
Term Annotations click to browse term
  cellular_component 11974
    cellular anatomical entity 11806
      organelle 9272
        membrane-bounded organelle 8224
          vesicle 1516
            intracellular vesicle 1391
              cytoplasmic vesicle 1385
                cytoplasmic vesicle membrane 272
                  transport vesicle membrane 125
                    ER to Golgi transport vesicle membrane + 12
                    Golgi to ER transport vesicle membrane 0
                    clathrin-sculpted acetylcholine transport vesicle membrane 0
                    clathrin-sculpted glutamate transport vesicle membrane 0
                    clathrin-sculpted monoamine transport vesicle membrane 0
                    cytoplasmic side of transport vesicle membrane + 0
                    exocytic vesicle membrane + 108
                    inter-Golgi transport vesicle membrane 0
                    lumenal side of transport vesicle membrane + 0
                    trans-Golgi network transport vesicle membrane + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.