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ONTOLOGY REPORT - ANNOTATIONS


Term:transport vesicle membrane
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Accession:GO:0030658 term browser browse the term
Definition:The lipid bilayer surrounding a transport vesicle.
Synonyms:exact_synonym: constitutive secretory pathway transport vesicle membrane
 broad_synonym: secretory vesicle membrane


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transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CA4 carbonic anhydrase 4 JBrowse link 9 36,327,919 36,337,103 RGD:9068941
G DBH dopamine beta-hydroxylase JBrowse link 9 50,004,806 50,024,130 RGD:13508589
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CPLX3 complexin 3 JBrowse link 30 37,888,770 37,893,168 RGD:13508589
G RAB10 RAB10, member RAS oncogene family JBrowse link 17 20,181,363 20,264,927 RGD:9068941
G RAB11B RAB11B, member RAS oncogene family JBrowse link 20 52,955,949 52,966,279 RGD:9068941
G RAB14 RAB14, member RAS oncogene family JBrowse link 11 74,157,497 74,172,817 RGD:9068941
G RAB26 RAB26, member RAS oncogene family JBrowse link 6 38,806,750 38,812,541 RGD:13508589
G RAB27B RAB27B, member RAS oncogene family JBrowse link 1 20,695,100 20,832,745 RGD:9068941
G RAB2A RAB2A, member RAS oncogene family JBrowse link 29 10,953,425 11,042,789 RGD:9068941
G RAB35 RAB35, member RAS oncogene family JBrowse link 26 16,061,872 16,078,489 RGD:9068941
G RAB3A RAB3A, member RAS oncogene family JBrowse link 20 44,796,740 44,802,224 RGD:13508589
G RAB3B RAB3B, member RAS oncogene family JBrowse link 15 9,305,495 9,378,003 RGD:13508589
G RAB3C RAB3C, member RAS oncogene family JBrowse link 2 45,459,068 45,731,994 RGD:9068941
G RAB4A RAB4A, member RAS oncogene family JBrowse link 4 9,914,681 9,965,468 RGD:9068941
G RAB4B RAB4B, member RAS oncogene family JBrowse link 1 113,003,317 113,011,978 RGD:9068941
G RAB5A RAB5A, member RAS oncogene family JBrowse link 23 23,303,650 23,333,571 RGD:13508589
G RAB5B RAB5B, member RAS oncogene family JBrowse link 10 307,693 325,766 RGD:9068941
G RAB5C RAB5C, member RAS oncogene family JBrowse link 9 20,754,264 20,776,941 RGD:9068941
G RAB7A RAB7A, member RAS oncogene family JBrowse link 20 2,704,716 2,776,518 RGD:13508589
G SYN1 synapsin I JBrowse link X 41,191,571 41,241,557 RGD:9068941
AP-1 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AFTPH aftiphilin JBrowse link 10 64,104,511 64,171,341 RGD:13508589
G AP1G1 adaptor related protein complex 1 subunit gamma 1 JBrowse link 5 77,512,865 77,589,136 RGD:13508589
G AP1G2 adaptor related protein complex 1 subunit gamma 2 JBrowse link 8 3,785,085 3,793,081 RGD:13508589
G CLBA1 clathrin binding box of aftiphilin containing 1 JBrowse link 8 72,448,580 72,454,685 RGD:13508589
G MYH6 myosin heavy chain 6 JBrowse link 8 3,629,459 3,655,946 RGD:13508589
G MYH7 myosin heavy chain 7 JBrowse link 8 3,660,155 3,677,650 RGD:13508589
G SLC18A3 solute carrier family 18 member A3 JBrowse link 28 1,476,873 1,478,538 RGD:13508589
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CLTA clathrin light chain A JBrowse link 11 52,636,328 52,681,258 RGD:13508589
G CLTB clathrin light chain B JBrowse link 4 36,915,106 36,935,565 RGD:13508589
G CLTC clathrin heavy chain JBrowse link 9 34,116,344 34,183,023 RGD:13508589
G CLTCL1 clathrin heavy chain like 1 JBrowse link 26 29,907,235 30,002,136 RGD:13508589
G DNM1L dynamin 1 like JBrowse link 27 16,161,855 16,211,983 RGD:9068941
G GLIPR2 GLI pathogenesis related 2 JBrowse link 11 52,622,460 52,634,602 RGD:13508589
G SYNRG synergin gamma JBrowse link 9 37,280,620 37,365,477 RGD:13508589
COPII vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KLHL12 kelch like family member 12 JBrowse link 7 256,814 284,132 RGD:9068941
G PDCD6 programmed cell death 6 JBrowse link 34 11,909,657 11,929,850 RGD:9068941
G PEF1 penta-EF-hand domain containing 1 JBrowse link 2 69,465,773 69,482,465 RGD:9068941
G POLR3F RNA polymerase III subunit F JBrowse link 24 4,715,146 4,727,938 RGD:13508589
G SAR1A secretion associated Ras related GTPase 1A JBrowse link 4 21,120,788 21,136,409 RGD:13508589
G SAR1B secretion associated Ras related GTPase 1B JBrowse link 11 22,713,459 22,743,190 RGD:13508589
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 20 8,041,485 8,075,078 RGD:13508589
G SEC23A Sec23 homolog A, COPII coat complex component JBrowse link 8 17,205,960 17,292,067 RGD:13508589
G SEC23B SEC23 homolog B, COPII coat complex component JBrowse link 24 4,663,043 4,700,949 RGD:13508589
G SEC24A SEC24 homolog A, COPII coat complex component JBrowse link 11 22,749,633 22,813,045 RGD:13508589
G SEC24B SEC24 homolog B, COPII coat complex component JBrowse link 32 29,671,702 29,766,628 RGD:13508589
G SEC24C SEC24 homolog C, COPII coat complex component JBrowse link 4 24,183,768 24,209,062 RGD:13508589
G SEC24D SEC24 homolog D, COPII coat complex component JBrowse link 32 37,690,158 37,795,762 RGD:13508589
G SEC31A SEC31 homolog A, COPII coat complex component JBrowse link 32 6,761,018 6,840,802 RGD:13508589
G SEC31B SEC31 homolog B, COPII coat complex component JBrowse link 28 13,210,213 13,246,170 RGD:13508589
ER to Golgi transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GOSR2 golgi SNAP receptor complex member 2 JBrowse link 9 10,201,625 10,220,688 RGD:13508589
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor JBrowse link 9 49,027,190 49,060,858 RGD:13508589
G SEC16B SEC16 homolog B, endoplasmic reticulum export factor JBrowse link 7 21,683,310 21,739,914 RGD:13508589
G SEC22B SEC22 homolog B, vesicle trafficking protein JBrowse link 17 57,094,038 57,115,891 RGD:13508589
G SEC23A Sec23 homolog A, COPII coat complex component JBrowse link 8 17,205,960 17,292,067 RGD:9068941
G USO1 USO1 vesicle transport factor JBrowse link 32 305,895 395,113 RGD:13508589
G VMA21 vacuolar ATPase assembly factor VMA21 JBrowse link X 119,429,680 119,502,007 RGD:13508589
G VTI1A vesicle transport through interaction with t-SNAREs 1A JBrowse link 28 23,496,553 23,854,609 RGD:13508589
G VTI1B vesicle transport through interaction with t-SNAREs 1B JBrowse link 8 41,619,365 41,650,389 RGD:13508589
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMPH amphiphysin JBrowse link 18 11,132,078 11,261,847 RGD:9068941
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 JBrowse link 10 69,261,311 69,287,540 RGD:9068941
G BIN1 bridging integrator 1 JBrowse link 19 23,503,934 23,534,407 RGD:9068941
G CLTC clathrin heavy chain JBrowse link 9 34,116,344 34,183,023 RGD:9068941
G DOC2A double C2 domain alpha JBrowse link 6 18,041,551 18,046,779 RGD:9068941
G RPH3A rabphilin 3A JBrowse link 26 10,147,910 10,379,742 RGD:9068941
G SGTA small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 20 56,432,688 56,451,438 RGD:9068941
G SYN1 synapsin I JBrowse link X 41,191,571 41,241,557 RGD:9068941
G SYN2 synapsin II JBrowse link 20 6,368,348 6,569,355 RGD:9068941
G SYN3 synapsin III JBrowse link 10 30,475,134 30,927,758 RGD:9068941
integral component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 JBrowse link 9 20,422,144 20,486,459 RGD:9068941
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 JBrowse link 12 1,046,109 1,049,839 RGD:9068941
G ATP8A1 ATPase phospholipid transporting 8A1 JBrowse link 13 39,366,692 39,588,879 RGD:9068941
G CLCN3 chloride voltage-gated channel 3 JBrowse link 25 20,528,708 20,616,687 RGD:9068941
G GABRA2 gamma-aminobutyric acid type A receptor subunit alpha2 JBrowse link 13 42,367,988 42,488,069 RGD:9068941
G LAMP1 lysosomal associated membrane protein 1 JBrowse link 22 60,678,116 60,695,619 RGD:9068941
G MAL2 mal, T cell differentiation protein 2 JBrowse link 13 18,404,979 18,422,076 RGD:9068941
G OPRD1 opioid receptor delta 1 JBrowse link 2 71,685,129 71,721,692 RGD:9068941
G OPRK1 opioid receptor kappa 1 JBrowse link 29 5,022,270 5,054,223 RGD:9068941
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 16 19,904,468 20,562,585 RGD:9068941
G PTPRS protein tyrosine phosphatase receptor type S JBrowse link 20 54,575,853 54,672,141 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 3 28,296,229 28,417,398 RGD:9068941
G SCAMP5 secretory carrier membrane protein 5 JBrowse link 30 38,007,967 38,029,541 RGD:9068941
G SLC10A4 solute carrier family 10 member 4 JBrowse link 13 44,293,956 44,299,529 RGD:9068941
G SLC17A6 solute carrier family 17 member 6 JBrowse link 21 44,015,161 44,056,286 RGD:13508589
G SLC17A7 solute carrier family 17 member 7 JBrowse link 1 107,054,242 107,064,444 RGD:13508589
G SLC17A8 solute carrier family 17 member 8 JBrowse link 15 39,443,790 39,489,988 RGD:13508589
G SLC18A2 solute carrier family 18 member A2 JBrowse link 28 27,731,709 27,809,341 RGD:9068941
G SLC18A3 solute carrier family 18 member A3 JBrowse link 28 1,476,873 1,478,538 RGD:9068941
G SLC30A3 solute carrier family 30 member 3 JBrowse link 17 21,230,918 21,239,598 RGD:13508589
G SLC32A1 solute carrier family 32 member 1 JBrowse link 24 27,142,153 27,146,986 RGD:13508589
G SLC6A17 solute carrier family 6 member 17 JBrowse link 6 41,773,367 41,822,831 RGD:9068941
G SLC6A7 solute carrier family 6 member 7 JBrowse link 4 58,873,547 58,892,357 RGD:9068941
G SLC6A9 solute carrier family 6 member 9 JBrowse link 15 16,235,342 16,267,161 RGD:9068941
G STX10 syntaxin 10 JBrowse link 20 49,075,302 49,078,694 RGD:13508589
G STX12 syntaxin 12 JBrowse link 2 72,546,178 72,582,706 RGD:9068941
G STX16 syntaxin 16 JBrowse link 24 43,425,719 43,451,828 RGD:9068941
G STX1A syntaxin 1A JBrowse link 6 6,574,616 6,583,002 RGD:9068941
G STX6 syntaxin 6 JBrowse link 7 14,452,663 14,506,120 RGD:13508589
G STX7 syntaxin 7 JBrowse link 1 25,544,283 25,607,179 RGD:9068941
G SV2A synaptic vesicle glycoprotein 2A JBrowse link 17 59,185,715 59,195,888 RGD:9068941
G SV2B synaptic vesicle glycoprotein 2B JBrowse link 3 48,694,905 48,870,157 RGD:9068941
G SV2C synaptic vesicle glycoprotein 2C JBrowse link 3 30,232,892 30,440,046 RGD:9068941
G SYNGR1 synaptogyrin 1 JBrowse link 10 25,685,079 25,735,940 RGD:9068941
G SYNPR synaptoporin JBrowse link 20 27,572,890 27,870,286 RGD:9068941
G SYP synaptophysin JBrowse link X 42,288,071 42,301,802 RGD:9068941
G SYPL1 synaptophysin like 1 JBrowse link 18 14,356,655 14,380,755 RGD:9068941
G SYT1 synaptotagmin 1 JBrowse link 15 21,629,061 22,042,734 RGD:9068941
G SYT11 synaptotagmin 11 JBrowse link 7 41,910,102 41,929,020 RGD:9068941
G SYT2 synaptotagmin 2 JBrowse link 7 497,387 509,338 RGD:9068941
G SYT9 synaptotagmin 9 JBrowse link 21 30,985,059 31,123,986 RGD:9068941
G TMEM163 transmembrane protein 163 JBrowse link 19 37,335,608 37,744,291 RGD:9068941
G VAMP1 vesicle associated membrane protein 1 JBrowse link 27 38,518,978 38,526,361 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 5 32,975,372 32,977,967 RGD:9068941
G VAMP3 vesicle associated membrane protein 3 JBrowse link 5 61,430,711 61,440,626 RGD:9068941
G VAMP4 vesicle associated membrane protein 4 JBrowse link 7 27,278,200 27,303,499 RGD:9068941
G VAMP7 vesicle associated membrane protein 7 JBrowse link X 123,717,524 123,783,781 RGD:9068941
G WFS1 wolframin ER transmembrane glycoprotein JBrowse link 13 38,451,722 38,466,481 RGD:9068941
synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCC8 ATP binding cassette subfamily C member 8 JBrowse link 21 39,963,001 40,037,040 RGD:9068941
G BCL2L1 BCL2 like 1 JBrowse link 24 21,145,214 21,209,425 RGD:9068941
G BORCS5 BLOC-1 related complex subunit 5 JBrowse link 27 33,839,345 33,949,056 RGD:13508589
G C5H16orf70 chromosome 5 C16orf70 homolog JBrowse link 5 82,215,511 82,244,216 RGD:13508589
G CALM1 calmodulin 1 JBrowse link 8 61,398,231 61,408,874 RGD:9068941
G CALM2 calmodulin 2 JBrowse link 10 49,299,698 49,314,533 RGD:9068941
G CALM3 calmodulin 3 JBrowse link 1 109,284,729 109,294,491 RGD:9068941
G CLTA clathrin light chain A JBrowse link 11 52,636,328 52,681,258 RGD:13508589
G CLTB clathrin light chain B JBrowse link 4 36,915,106 36,935,565 RGD:13508589
G DLG2 discs large MAGUK scaffold protein 2 JBrowse link 21 13,796,725 15,776,601 RGD:9068941
G DMD dystrophin JBrowse link X 26,290,903 28,444,635 RGD:9068941
G DNM1L dynamin 1 like JBrowse link 27 16,161,855 16,211,983 RGD:9068941
G DRD2 dopamine receptor D2 JBrowse link 5 19,732,842 19,795,241 RGD:9068941
G DTNBP1 dystrobrevin binding protein 1 JBrowse link 35 14,738,025 14,862,609 RGD:13508589
G GAD2 glutamate decarboxylase 2 JBrowse link 2 7,365,708 7,450,893 RGD:9068941
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 4 55,801,269 56,103,383 RGD:9068941
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 15 54,634,332 54,710,711 RGD:9068941
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 9 48,492,967 48,513,981 RGD:9068941
G ICA1 islet cell autoantigen 1 JBrowse link 14 23,673,739 23,816,850 RGD:13508589
G MCTP1 multiple C2 and transmembrane domain containing 1 JBrowse link 3 14,255,685 14,782,798 RGD:13508589
G MCTP2 multiple C2 and transmembrane domain containing 2 JBrowse link 3 45,842,415 46,037,455 RGD:13508589
G MFF mitochondrial fission factor JBrowse link 25 40,111,860 40,142,246 RGD:9068941
G OTOF otoferlin JBrowse link 17 20,518,480 20,619,713 RGD:13508589
G PI4K2A phosphatidylinositol 4-kinase type 2 alpha JBrowse link 28 10,890,654 10,921,898 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 1 49,886,887 51,201,930 RGD:9068941
G PRRT1 proline rich transmembrane protein 1 JBrowse link 12 1,545,384 1,549,015 RGD:9068941
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 16 19,904,468 20,562,585 RGD:9068941
G RPH3A rabphilin 3A JBrowse link 26 10,147,910 10,379,742 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 3 28,296,229 28,417,398 RGD:13508589
G SEMA4C semaphorin 4C JBrowse link 10 45,105,701 45,116,504 RGD:13508589
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 11 37,720,793 37,769,027 RGD:9068941
G SLC17A6 solute carrier family 17 member 6 JBrowse link 21 44,015,161 44,056,286 RGD:13508589
G SLC17A7 solute carrier family 17 member 7 JBrowse link 1 107,054,242 107,064,444 RGD:13508589
G SLC17A8 solute carrier family 17 member 8 JBrowse link 15 39,443,790 39,489,988 RGD:13508589
G SLC18A1 solute carrier family 18 member A1 JBrowse link 25 36,859,047 36,904,057 RGD:13508589
G SLC18A2 solute carrier family 18 member A2 JBrowse link 28 27,731,709 27,809,341 RGD:13508589
G SLC2A3 solute carrier family 2 member 3 JBrowse link 27 37,297,932 37,309,604 RGD:9068941
G SLC30A3 solute carrier family 30 member 3 JBrowse link 17 21,230,918 21,239,598 RGD:9068941
G SLC9B2 solute carrier family 9 member B2 JBrowse link 32 24,354,741 24,419,198 RGD:13508589
G SNAP47 synaptosome associated protein 47 JBrowse link 14 1,058,891 1,104,568 RGD:9068941
G SNCA synuclein alpha JBrowse link 32 12,915,871 13,079,338 RGD:9068941
G STX1A syntaxin 1A JBrowse link 6 6,574,616 6,583,002 RGD:13508589
G SV2A synaptic vesicle glycoprotein 2A JBrowse link 17 59,185,715 59,195,888 RGD:13508589
G SV2B synaptic vesicle glycoprotein 2B JBrowse link 3 48,694,905 48,870,157 RGD:13508589
G SV2C synaptic vesicle glycoprotein 2C JBrowse link 3 30,232,892 30,440,046 RGD:13508589
G SYN1 synapsin I JBrowse link X 41,191,571 41,241,557 RGD:13508589
G SYN2 synapsin II JBrowse link 20 6,368,348 6,569,355 RGD:13508589
G SYN3 synapsin III JBrowse link 10 30,475,134 30,927,758 RGD:13508589
G SYNDIG1 synapse differentiation inducing 1 JBrowse link 23 759,787 865,659 RGD:9068941
G SYNGR1 synaptogyrin 1 JBrowse link 10 25,685,079 25,735,940 RGD:13508589
G SYNGR2 synaptogyrin 2 JBrowse link 9 2,972,561 2,976,775 RGD:9068941
G SYNPR synaptoporin JBrowse link 20 27,572,890 27,870,286 RGD:13508589
G SYP synaptophysin JBrowse link X 42,288,071 42,301,802 RGD:13508589
G SYPL1 synaptophysin like 1 JBrowse link 18 14,356,655 14,380,755 RGD:13508589
G SYPL2 synaptophysin like 2 JBrowse link 6 42,377,528 42,391,765 RGD:13508589
G SYT1 synaptotagmin 1 JBrowse link 15 21,629,061 22,042,734 RGD:13508589
G SYT5 synaptotagmin 5 JBrowse link 1 102,456,767 102,463,750 RGD:13508589
G SYT8 synaptotagmin 8 JBrowse link 18 46,069,380 46,075,477 RGD:13508589
G TRPM7 transient receptor potential cation channel subfamily M member 7 JBrowse link 30 16,465,546 16,579,874 RGD:9068941
G UNC13A unc-13 homolog A JBrowse link 20 45,179,275 45,237,544 RGD:13508589
G UNC13B unc-13 homolog B JBrowse link 11 51,707,968 51,941,148 RGD:13508589
G UNC13C unc-13 homolog C JBrowse link 30 19,519,177 20,096,633 RGD:13508589
G VAMP2 vesicle associated membrane protein 2 JBrowse link 5 32,975,372 32,977,967 RGD:13508589
trans-Golgi network transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NRGN neurogranin JBrowse link 5 9,673,107 9,679,819 RGD:9068941
G RASSF9 Ras association domain family member 9 JBrowse link 15 27,304,618 27,331,876 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16223
    cellular anatomical entity 16055
      membrane 8027
        whole membrane 1126
          transport vesicle membrane 153
            ER to Golgi transport vesicle membrane + 23
            Golgi to ER transport vesicle membrane 0
            clathrin-sculpted acetylcholine transport vesicle membrane 0
            clathrin-sculpted glutamate transport vesicle membrane 0
            clathrin-sculpted monoamine transport vesicle membrane 0
            cytoplasmic side of transport vesicle membrane + 0
            exocytic vesicle membrane + 117
            inter-Golgi transport vesicle membrane 0
            lumenal side of transport vesicle membrane + 0
            trans-Golgi network transport vesicle membrane + 16
Path 2
Term Annotations click to browse term
  cellular_component 16223
    cellular anatomical entity 16055
      organelle 11223
        membrane-bounded organelle 9922
          vesicle 1766
            intracellular vesicle 1613
              cytoplasmic vesicle 1607
                cytoplasmic vesicle membrane 336
                  transport vesicle membrane 153
                    ER to Golgi transport vesicle membrane + 23
                    Golgi to ER transport vesicle membrane 0
                    clathrin-sculpted acetylcholine transport vesicle membrane 0
                    clathrin-sculpted glutamate transport vesicle membrane 0
                    clathrin-sculpted monoamine transport vesicle membrane 0
                    cytoplasmic side of transport vesicle membrane + 0
                    exocytic vesicle membrane + 117
                    inter-Golgi transport vesicle membrane 0
                    lumenal side of transport vesicle membrane + 0
                    trans-Golgi network transport vesicle membrane + 16
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.