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ONTOLOGY REPORT - ANNOTATIONS


Term:transport vesicle membrane
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Accession:GO:0030658 term browser browse the term
Definition:The lipid bilayer surrounding a transport vesicle.
Synonyms:exact_synonym: constitutive secretory pathway transport vesicle membrane
 broad_synonym: secretory vesicle membrane


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transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CA4 carbonic anhydrase 4 JBrowse link 12 37,962,951 37,972,443 RGD:14298760
G CYB561 cytochrome b561 JBrowse link 12 15,435,973 15,447,104 RGD:14298760
G DMBT1 deleted in malignant brain tumors 1 JBrowse link 14 132,154,346 132,231,274 RGD:14298760
G SCGN secretagogin, EF-hand calcium binding protein JBrowse link 7 20,389,156 20,432,985 RGD:14298760
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CPLX3 complexin 3 JBrowse link 7 58,712,743 58,717,028 RGD:14298760
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 17 62,754,630 62,780,470 RGD:9068941
G RAB10 RAB10, member RAS oncogene family JBrowse link 3 112,842,190 112,924,188 RGD:9068941
G RAB11B RAB11B, member RAS oncogene family JBrowse link 2 70,884,457 70,896,169 RGD:9068941
G RAB14 RAB14, member RAS oncogene family JBrowse link 1 261,228,112 261,256,913 RGD:9068941
G RAB26 RAB26, member RAS oncogene family JBrowse link 3 39,831,981 39,837,510 RGD:14298760
G RAB27B RAB27B, member RAS oncogene family JBrowse link 1 104,241,500 104,418,721 RGD:9068941
G RAB2A RAB2A, member RAS oncogene family JBrowse link 4 72,800,617 72,882,183 RGD:9068941
G RAB35 RAB35, member RAS oncogene family JBrowse link 14 40,124,318 40,141,261 RGD:9068941
G RAB3A RAB3A, member RAS oncogene family JBrowse link 2 59,603,090 59,609,773 RGD:14298760
G RAB3B RAB3B, member RAS oncogene family JBrowse link 6 160,194,488 160,255,635 RGD:14298760
G RAB3C RAB3C, member RAS oncogene family JBrowse link 16 37,411,931 37,729,583 RGD:9068941
G RAB4A RAB4A, member RAS oncogene family JBrowse link 14 60,481,484 60,528,549 RGD:9068941
G RAB4B RAB4B, member RAS oncogene family JBrowse link 6 48,989,080 49,010,042 RGD:9068941
G RAB5A RAB5A, member RAS oncogene family JBrowse link 13 6,905,302 6,940,165 RGD:14298760
G RAB5B RAB5B, member RAS oncogene family JBrowse link 5 21,373,333 21,392,729 RGD:9068941
G RAB5C RAB5C, member RAS oncogene family JBrowse link 12 20,613,991 20,635,952 RGD:9068941
G RAB7A RAB7A, member RAS oncogene family JBrowse link 13 71,777,422 71,886,758 RGD:9068941
G SYN1 synapsin I JBrowse link X 42,090,245 42,142,254 RGD:9068941
AP-1 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AFTPH aftiphilin JBrowse link 3 77,351,872 77,422,854 RGD:14298760
G AP1G1 adaptor related protein complex 1 subunit gamma 1 JBrowse link 6 14,719,949 14,809,821 RGD:14298760
G AP1G2 adaptor related protein complex 1 subunit gamma 2 JBrowse link 7 75,533,131 75,549,490 RGD:14298760
G SLC18A3 solute carrier family 18 member A3 JBrowse link 14 90,113,534 90,115,813 RGD:14298760
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CLTA clathrin light chain A JBrowse link 1 236,971,317 236,993,291 RGD:14298760
G CLTB clathrin light chain B JBrowse link 2 81,464,887 81,484,712 RGD:14298760
G CLTC clathrin heavy chain JBrowse link 12 35,848,894 35,926,028 RGD:14298760
G DNM1L dynamin 1 like JBrowse link 5 41,571,054 41,636,058 RGD:9068941
G SYNRG synergin gamma JBrowse link 12 38,974,567 39,069,868 RGD:14298760
COPII vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KLHL12 kelch like family member 12 JBrowse link 10 24,869,816 24,902,981 RGD:9068941
G PDCD6 programmed cell death 6 JBrowse link 16 79,818,960 79,832,272 RGD:9068941
G PEF1 penta-EF-hand domain containing 1 JBrowse link 6 88,152,232 88,170,327 RGD:14298760
G SAR1A secretion associated Ras related GTPase 1A JBrowse link 14 73,090,936 73,108,209 RGD:14298760
G SAR1B secretion associated Ras related GTPase 1B JBrowse link 2 136,848,843 136,874,248 RGD:14298760
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 13 66,483,620 66,524,411 RGD:14298760
G SEC23A Sec23 homolog A, COPII coat complex component JBrowse link 7 61,113,760 61,184,218 RGD:14298760
G SEC23B SEC23 homolog B, COPII coat complex component JBrowse link 17 26,760,048 26,801,091 RGD:14298760
G SEC24A SEC24 homolog A, COPII coat complex component JBrowse link 2 136,833,399 136,952,181 RGD:14298760
G SEC24B SEC24 homolog B, COPII coat complex component JBrowse link 8 112,670,529 112,762,870 RGD:14298760
G SEC24C SEC24 homolog C, COPII coat complex component JBrowse link 14 76,473,706 76,499,127 RGD:14298760
G SEC24D SEC24 homolog D, COPII coat complex component JBrowse link 8 104,560,723 105,005,400 RGD:14298760
G SEC31A SEC31 homolog A, COPII coat complex component JBrowse link 8 135,431,965 135,495,124 RGD:14298760
G SEC31B SEC31 homolog B, COPII coat complex component JBrowse link 14 111,585,917 111,626,691 RGD:14298760
ER to Golgi transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GOSR2 golgi SNAP receptor complex member 2 JBrowse link 12 17,768,082 17,799,313 RGD:14298760
G LOC100157002 vesicle-trafficking protein SEC22b JBrowse link 4 100,880,843 100,900,942 RGD:14298760
G SCAP SREBF chaperone JBrowse link 13 30,253,262 30,320,625 RGD:14298760
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor RGD:14298760
G SEC16B SEC16 homolog B, endoplasmic reticulum export factor JBrowse link 9 119,778,660 119,842,962 RGD:14298760
G SEC23A Sec23 homolog A, COPII coat complex component JBrowse link 7 61,113,760 61,184,218 RGD:9068941
G SREBF1 sterol regulatory element binding transcription factor 1 JBrowse link 12 60,733,967 60,750,951 RGD:14298760
G USO1 USO1 vesicle transport factor JBrowse link 8 71,363,627 71,451,258 RGD:14298760
G VMA21 vacuolar ATPase assembly factor VMA21 JBrowse link X 122,872,141 122,882,976 RGD:14298760
G VTI1B vesicle transport through interaction with t-SNAREs 1B JBrowse link 7 91,386,020 91,413,480 RGD:14298760
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMPH amphiphysin JBrowse link 9 108,800,718 108,971,575 RGD:9068941
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 JBrowse link 3 71,560,102 71,591,885 RGD:9068941
G BIN1 bridging integrator 1 JBrowse link 15 25,328,679 25,379,675 RGD:9068941
G CLTC clathrin heavy chain JBrowse link 12 35,848,894 35,926,028 RGD:9068941
G DOC2A double C2 domain alpha JBrowse link 3 18,211,264 18,216,096 RGD:9068941
G RPH3A rabphilin 3A JBrowse link 14 38,867,095 39,162,052 RGD:9068941
G SGTA small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 2 75,879,081 75,896,279 RGD:9068941
G SYN1 synapsin I JBrowse link X 42,090,245 42,142,254 RGD:9068941
G SYN2 synapsin II JBrowse link 13 68,050,015 68,221,504 RGD:9068941
G SYN3 synapsin III JBrowse link 5 12,017,741 12,501,995 RGD:9068941
integral component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 JBrowse link 12 20,288,409 20,344,142 RGD:9068941
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 JBrowse link 7 23,670,970 23,673,860 RGD:14298760
G ATP8A1 ATPase phospholipid transporting 8A1 JBrowse link 8 33,384,493 33,637,299 RGD:9068941
G CLCN3 chloride voltage-gated channel 3 JBrowse link 14 20,037,628 20,127,160 RGD:9068941
G GABRA2 gamma-aminobutyric acid type A receptor subunit alpha2 JBrowse link 8 36,344,633 36,474,840 RGD:9068941
G LAMP1 lysosomal associated membrane protein 1 JBrowse link 11 78,600,818 78,617,587 RGD:9068941
G MAL2 mal, T cell differentiation protein 2 JBrowse link 4 19,593,536 19,658,695 RGD:9068941
G OPRD1 opioid receptor delta 1 JBrowse link 6 85,775,576 85,827,170 RGD:9068941
G OPRK1 opioid receptor kappa 1 JBrowse link 4 77,399,298 77,429,025 RGD:9068941
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 18 721,125 1,389,609 RGD:9068941
G PTPRS protein tyrosine phosphatase receptor type S JBrowse link 2 73,607,815 73,680,685 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 2 87,210,839 87,313,520 RGD:9068941
G SCAMP5 secretory carrier membrane protein 5 JBrowse link 7 58,550,190 58,577,894 RGD:9068941
G SLC10A4 solute carrier family 10 member 4 JBrowse link 8 38,378,878 38,385,748 RGD:9068941
G SLC17A6 solute carrier family 17 member 6 JBrowse link 2 37,098,983 37,138,935 RGD:14298760
G SLC17A7 solute carrier family 17 member 7 JBrowse link 6 54,511,121 54,521,616 RGD:14298760
G SLC17A8 solute carrier family 17 member 8 JBrowse link 5 83,741,641 83,809,472 RGD:14298760
G SLC18A2 solute carrier family 18 member A2 JBrowse link 14 127,357,605 127,394,242 RGD:9068941
G SLC18A3 solute carrier family 18 member A3 JBrowse link 14 90,113,534 90,115,813 RGD:9068941
G SLC30A3 solute carrier family 30 member 3 JBrowse link 3 111,870,803 111,878,234 RGD:9068941
G SLC32A1 solute carrier family 32 member 1 JBrowse link 17 41,689,479 41,694,560 RGD:14298760
G SLC6A17 solute carrier family 6 member 17 JBrowse link 4 109,919,153 109,974,235 RGD:9068941
G SLC6A7 solute carrier family 6 member 7 JBrowse link 2 151,221,542 151,241,983 RGD:9068941
G SLC6A9 solute carrier family 6 member 9 JBrowse link 6 167,267,193 167,301,598 RGD:9068941
G STX10 syntaxin 10 JBrowse link 2 65,914,132 65,917,075 RGD:14298760
G STX12 syntaxin 12 JBrowse link 6 84,918,827 84,960,235 RGD:14298760
G STX16 syntaxin 16 JBrowse link 17 58,839,982 58,873,396 RGD:9068941
G STX6 syntaxin 6 JBrowse link 9 122,533,737 122,580,631 RGD:9068941
G STX7 syntaxin 7 JBrowse link 1 31,184,905 31,237,052 RGD:9068941
G SV2A synaptic vesicle glycoprotein 2A JBrowse link 4 99,138,319 99,153,153 RGD:9068941
G SV2B synaptic vesicle glycoprotein 2B JBrowse link 7 87,564,380 87,767,247 RGD:9068941
G SV2C synaptic vesicle glycoprotein 2C JBrowse link 2 84,996,697 85,235,827 RGD:9068941
G SYNGR1 synaptogyrin 1 JBrowse link 5 8,870,641 8,902,267 RGD:9068941
G SYNPR synaptoporin JBrowse link 13 44,841,224 45,164,810 RGD:9068941
G SYP synaptophysin JBrowse link X 43,232,190 43,246,764 RGD:9068941
G SYPL1 synaptophysin like 1 JBrowse link 9 105,952,898 105,985,172 RGD:9068941
G SYT1 synaptotagmin 1 JBrowse link 5 101,871,313 102,394,310 RGD:9068941
G SYT11 synaptotagmin 11 JBrowse link 4 94,139,345 94,163,091 RGD:9068941
G SYT2 synaptotagmin 2 JBrowse link 10 24,638,645 24,727,198 RGD:9068941
G SYT9 synaptotagmin 9 JBrowse link 9 2,191,757 2,395,157 RGD:14298760
G TMEM163 transmembrane protein 163 JBrowse link 15 17,260,885 17,548,920 RGD:14298760
G VAMP1 vesicle associated membrane protein 1 JBrowse link 5 64,181,496 64,188,275 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 12 53,378,407 53,382,243 RGD:9068941
G VAMP3 vesicle associated membrane protein 3 JBrowse link 6 68,473,921 68,482,438 RGD:9068941
G VAMP4 vesicle associated membrane protein 4 JBrowse link 9 114,138,350 114,174,996 RGD:9068941
G VAMP7 vesicle associated membrane protein 7 JBrowse link X 125,863,266 125,917,232 RGD:9068941
G WFS1 wolframin ER transmembrane glycoprotein JBrowse link 8 4,362,678 4,405,185 RGD:9068941
synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCC8 ATP binding cassette subfamily C member 8 JBrowse link 2 41,666,974 41,754,624 RGD:9068941
G BCL2L1 BCL2 like 1 JBrowse link 17 35,366,139 35,415,798 RGD:14298760
RGD:9068941
G BORCS5 BLOC-1 related complex subunit 5 JBrowse link 5 59,969,806 60,072,976 RGD:14298760
G C6H16orf70 chromosome 6 C16orf70 homolog JBrowse link 6 27,757,576 27,792,564 RGD:14298760
G CALM1 calmodulin 1 JBrowse link 7 112,160,823 112,171,754 RGD:9068941
G CALM2 calmodulin 2 JBrowse link 3 93,371,765 93,386,378 RGD:9068941
G CALM3 calmodulin 3 JBrowse link 6 52,506,979 52,516,704 RGD:9068941
G CLTA clathrin light chain A JBrowse link 1 236,971,317 236,993,291 RGD:14298760
G CLTB clathrin light chain B JBrowse link 2 81,464,887 81,484,712 RGD:14298760
G DLG2 discs large MAGUK scaffold protein 2 JBrowse link 9 17,575,991 19,547,417 RGD:9068941
G DMD dystrophin JBrowse link X 27,028,223 29,650,728 RGD:9068941
G DNM1L dynamin 1 like JBrowse link 5 41,571,054 41,636,058 RGD:9068941
G DRD2 dopamine receptor D2 JBrowse link 9 41,068,618 41,135,262 RGD:9068941
G DTNBP1 dystrobrevin binding protein 1 JBrowse link 7 11,602,470 11,720,156 RGD:14298760
G GAD2 glutamate decarboxylase 2 JBrowse link 10 49,316,682 49,391,013 RGD:9068941
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 16 69,332,786 69,654,366 RGD:9068941
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 8 46,078,122 46,247,144 RGD:9068941
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 RGD:9068941
G ICA1 islet cell autoantigen 1 JBrowse link 9 78,364,478 78,515,092 RGD:9068941
G MCTP1 multiple C2 and transmembrane domain containing 1 JBrowse link 2 101,384,904 101,920,152 RGD:14298760
G MCTP2 multiple C2 and transmembrane domain containing 2 JBrowse link 7 84,725,754 84,962,691 RGD:14298760
G MFF mitochondrial fission factor JBrowse link 15 128,768,441 128,799,355 RGD:9068941
G OTOF otoferlin JBrowse link 3 112,478,188 112,581,105 RGD:14298760
G PI4K2A phosphatidylinositol 4-kinase type 2 alpha JBrowse link 14 109,008,143 109,043,517 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 1 5,698,508 6,731,132 RGD:9068941
G PRRT1 proline rich transmembrane protein 1 JBrowse link 7 24,183,557 24,186,892 RGD:9068941
G PRSS38 serine protease 38 JBrowse link 2 50,972,132 51,008,027 RGD:14298760
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 18 721,125 1,389,609 RGD:14298760
G RPH3A rabphilin 3A JBrowse link 14 38,867,095 39,162,052 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 2 87,210,839 87,313,520 RGD:9068941
G SEMA4C semaphorin 4C JBrowse link 3 56,750,745 56,760,835 RGD:14298760
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 1 205,081,227 205,285,359 RGD:9068941
G SLC17A6 solute carrier family 17 member 6 JBrowse link 2 37,098,983 37,138,935 RGD:14298760
G SLC17A7 solute carrier family 17 member 7 JBrowse link 6 54,511,121 54,521,616 RGD:14298760
G SLC17A8 solute carrier family 17 member 8 JBrowse link 5 83,741,641 83,809,472 RGD:14298760
G SLC18A1 solute carrier family 18 member A1 JBrowse link 14 4,243,553 4,279,341 RGD:14298760
G SLC18A2 solute carrier family 18 member A2 JBrowse link 14 127,357,605 127,394,242 RGD:14298760
G SLC2A3 solute carrier family 2 member 3 JBrowse link 5 62,963,635 63,041,955 RGD:9068941
G SLC30A3 solute carrier family 30 member 3 JBrowse link 3 111,870,803 111,878,234 RGD:9068941
G SLC9B2 solute carrier family 9 member B2 JBrowse link 8 117,996,777 118,049,430 RGD:14298760
G SNAP47 synaptosome associated protein 47 JBrowse link 2 50,812,309 50,921,744 RGD:9068941
G SNAPIN SNAP associated protein JBrowse link 4 95,987,524 95,989,527 RGD:14298760
G SNCA synuclein alpha JBrowse link 8 129,247,724 129,388,307 RGD:14298760
G STX1A syntaxin 1A JBrowse link 3 10,974,127 10,991,846 RGD:14298760
G SV2A synaptic vesicle glycoprotein 2A JBrowse link 4 99,138,319 99,153,153 RGD:14298760
G SV2B synaptic vesicle glycoprotein 2B JBrowse link 7 87,564,380 87,767,247 RGD:14298760
G SV2C synaptic vesicle glycoprotein 2C JBrowse link 2 84,996,697 85,235,827 RGD:14298760
G SYN1 synapsin I JBrowse link X 42,090,245 42,142,254 RGD:14298760
G SYN2 synapsin II JBrowse link 13 68,050,015 68,221,504 RGD:14298760
G SYN3 synapsin III JBrowse link 5 12,017,741 12,501,995 RGD:14298760
G SYNDIG1 synapse differentiation inducing 1 JBrowse link 17 30,621,622 30,709,387 RGD:9068941
G SYNGR1 synaptogyrin 1 JBrowse link 5 8,870,641 8,902,267 RGD:14298760
G SYNGR2 synaptogyrin 2 JBrowse link 12 3,795,888 3,799,663 RGD:14298760
G SYNGR3 synaptogyrin 3 JBrowse link 3 39,975,067 39,981,537 RGD:14298760
G SYNGR4 synaptogyrin 4 JBrowse link 6 53,784,164 53,794,077 RGD:14298760
G SYNPR synaptoporin JBrowse link 13 44,841,224 45,164,810 RGD:14298760
G SYP synaptophysin JBrowse link X 43,232,190 43,246,764 RGD:14298760
G SYPL1 synaptophysin like 1 JBrowse link 9 105,952,898 105,985,172 RGD:14298760
G SYPL2 synaptophysin like 2 JBrowse link 4 110,647,790 110,663,199 RGD:14298760
G SYT1 synaptotagmin 1 JBrowse link 5 101,871,313 102,394,310 RGD:14298760
G SYT2 synaptotagmin 2 JBrowse link 10 24,638,645 24,727,198 RGD:14298760
G SYT5 synaptotagmin 5 JBrowse link 6 59,381,649 59,389,014 RGD:14298760
G SYT8 synaptotagmin 8 JBrowse link 2 1,245,988 1,250,422 RGD:14298760
G TRPM7 transient receptor potential cation channel subfamily M member 7 JBrowse link 1 121,146,093 121,250,227 RGD:9068941
G UNC13B unc-13 homolog B JBrowse link 1 235,918,751 236,158,098 RGD:14298760
G UNC13C unc-13 homolog C JBrowse link 1 117,163,115 117,765,125 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 12 53,378,407 53,382,243 RGD:9068941
trans-Golgi network transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NRGN neurogranin JBrowse link 9 51,967,313 51,977,197 RGD:9068941
G RASSF9 Ras association domain family member 9 JBrowse link 5 96,296,580 96,341,751 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16660
    cellular anatomical entity 16498
      membrane 8470
        whole membrane 1144
          transport vesicle membrane 154
            ER to Golgi transport vesicle membrane + 23
            Golgi to ER transport vesicle membrane 0
            clathrin-sculpted acetylcholine transport vesicle membrane 0
            clathrin-sculpted glutamate transport vesicle membrane 0
            clathrin-sculpted monoamine transport vesicle membrane 0
            cytoplasmic side of transport vesicle membrane + 0
            exocytic vesicle membrane + 121
            inter-Golgi transport vesicle membrane 0
            lumenal side of transport vesicle membrane + 0
            trans-Golgi network transport vesicle membrane + 11
Path 2
Term Annotations click to browse term
  cellular_component 16660
    cellular anatomical entity 16498
      organelle 11174
        membrane-bounded organelle 9931
          vesicle 1787
            intracellular vesicle 1632
              cytoplasmic vesicle 1626
                cytoplasmic vesicle membrane 331
                  transport vesicle membrane 154
                    ER to Golgi transport vesicle membrane + 23
                    Golgi to ER transport vesicle membrane 0
                    clathrin-sculpted acetylcholine transport vesicle membrane 0
                    clathrin-sculpted glutamate transport vesicle membrane 0
                    clathrin-sculpted monoamine transport vesicle membrane 0
                    cytoplasmic side of transport vesicle membrane + 0
                    exocytic vesicle membrane + 121
                    inter-Golgi transport vesicle membrane 0
                    lumenal side of transport vesicle membrane + 0
                    trans-Golgi network transport vesicle membrane + 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.