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ONTOLOGY REPORT - ANNOTATIONS


Term:transport vesicle membrane
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Accession:GO:0030658 term browser browse the term
Definition:The lipid bilayer surrounding a transport vesicle.
Synonyms:exact_synonym: constitutive secretory pathway transport vesicle membrane
 broad_synonym: secretory vesicle membrane


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transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ca4 carbonic anhydrase 4 JBrowse link NW_004936490 1,764,845 1,773,752 RGD:9068941
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cplx3 complexin 3 JBrowse link NW_004936471 33,798,523 33,803,045 RGD:9068941
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004936514 11,131,666 11,139,404 RGD:9068941
G Rab10 RAB10, member RAS oncogene family JBrowse link NW_004936493 6,263,870 6,351,327 RGD:9068941
G Rab11b RAB11B, member RAS oncogene family JBrowse link NW_004936588 5,198,659 5,210,430 RGD:9068941
G Rab14 RAB14, member RAS oncogene family JBrowse link NW_004936487 9,675,517 9,699,469 RGD:9068941
G Rab26 RAB26, member RAS oncogene family JBrowse link NW_004936694 1,896,360 1,902,272 RGD:9068941
G Rab27b RAB27B, member RAS oncogene family JBrowse link NW_004936497 9,039,552 9,176,182 RGD:9068941
G Rab2a RAB2A, member RAS oncogene family JBrowse link NW_004936496 12,626,242 12,680,334 RGD:9068941
G Rab35 RAB35, member RAS oncogene family JBrowse link NW_004936668 795,477 812,187 RGD:9068941
G Rab3a RAB3A, member RAS oncogene family JBrowse link NW_004936596 2,990,367 2,995,935 RGD:9068941
G Rab3b RAB3B, member RAS oncogene family JBrowse link NW_004936522 8,924,724 8,985,309 RGD:9068941
G Rab3c RAB3C, member RAS oncogene family JBrowse link NW_004936480 9,559,485 9,585,893 RGD:9068941
G Rab4a RAB4A, member RAS oncogene family JBrowse link NW_004936484 20,281,495 20,301,906 RGD:9068941
G Rab4b RAB4B, member RAS oncogene family JBrowse link NW_004936661 3,049,802 3,059,921 RGD:9068941
G Rab5a RAB5A, member RAS oncogene family JBrowse link NW_004936473 12,238,226 12,267,339 RGD:9068941
G Rab5b RAB5B, member RAS oncogene family JBrowse link NW_004936646 386,958 408,265 RGD:9068941
G Rab5c RAB5C, member RAS oncogene family JBrowse link NW_004936490 16,962,793 16,985,006 RGD:9068941
G Rab7a RAB7A, member RAS oncogene family JBrowse link NW_004936798 297,600 304,929 RGD:9068941
G Syn1 synapsin I JBrowse link NW_004936502 13,334,998 13,387,082 RGD:9068941
AP-1 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aftph aftiphilin JBrowse link NW_004936491 9,298,338 9,422,945 RGD:9068941
G Slc18a3 solute carrier family 18 member A3 JBrowse link NW_004936728 703,688 706,317 RGD:9068941
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1l dynamin 1 like JBrowse link NW_004936607 3,576,357 3,632,423 RGD:9068941
G Synrg synergin gamma JBrowse link NW_004936490 776,939 840,019 RGD:9068941
COPII vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Klhl12 kelch like family member 12 JBrowse link NW_004936567 1,681,421 1,714,150 RGD:9068941
G Pdcd6 programmed cell death 6 JBrowse link NW_004936815 1,129,367 1,144,020 RGD:9068941
G Pef1 penta-EF-hand domain containing 1 JBrowse link NW_004936474 14,745,812 14,761,279 RGD:9068941
G Sar1a secretion associated Ras related GTPase 1A JBrowse link NW_004936521 8,422,511 8,439,945 RGD:9068941
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link NW_004936602 3,013,490 3,030,489 RGD:9068941
G Sec23a Sec23 homolog A, COPII coat complex component JBrowse link NW_004936494 12,643,790 12,702,390 RGD:9068941
G Sec24a SEC24 homolog A, COPII coat complex component JBrowse link NW_004936647 612,640 689,963 RGD:9068941
G Sec24b SEC24 homolog B, COPII coat complex component JBrowse link NW_004936563 676,564 772,877 RGD:9068941
G Sec24c SEC24 homolog C, COPII coat complex component JBrowse link NW_004936521 5,374,555 5,402,123 RGD:9068941
G Sec24d SEC24 homolog D, COPII coat complex component JBrowse link NW_004936869 485,706 566,591 RGD:9068941
G Sec31a SEC31 homolog A, COPII coat complex component JBrowse link NW_004936738 1,664,916 1,741,739 RGD:9068941
ER to Golgi transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sec22b SEC22 homolog B, vesicle trafficking protein JBrowse link NW_004936872 294,116 313,893 RGD:9068941
G Sec23a Sec23 homolog A, COPII coat complex component JBrowse link NW_004936494 12,643,790 12,702,390 RGD:9068941
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amph amphiphysin JBrowse link NW_004936478 13,959,669 14,183,835 RGD:9068941
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 JBrowse link NW_004936491 15,112,422 15,138,716 RGD:9068941
G Bin1 bridging integrator 1 JBrowse link NW_004936469 44,128,308 44,185,739 RGD:9068941
G Cltc clathrin heavy chain JBrowse link NW_004936490 3,659,682 3,726,222 RGD:9068941
G Doc2a double C2 domain alpha JBrowse link NW_004936501 12,458,537 12,463,857 RGD:9068941
G Rph3a rabphilin 3A JBrowse link NW_004936668 2,827,574 2,911,955 RGD:9068941
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link NW_004936588 1,599,453 1,616,480 RGD:9068941
G Syn1 synapsin I JBrowse link NW_004936502 13,334,998 13,387,082 RGD:9068941
G Syn2 synapsin II JBrowse link NW_004936602 1,460,602 1,506,509 RGD:9068941
G Syn3 synapsin III JBrowse link NW_004936492 6,836,441 7,253,867 RGD:9068941
integral component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link NW_004936490 17,235,661 17,296,589 RGD:9068941
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 JBrowse link NW_004936727 1,963,605 1,965,727 RGD:9068941
G Atp8a1 ATPase phospholipid transporting 8A1 JBrowse link NW_004936482 9,562,214 9,778,494 RGD:9068941
G Clcn3 chloride voltage-gated channel 3 JBrowse link NW_004936516 1,678,610 1,760,099 RGD:9068941
G Gabra2 gamma-aminobutyric acid type A receptor alpha2 subunit JBrowse link NW_004936482 12,555,222 12,685,122 RGD:9068941
G Lamp1 lysosomal associated membrane protein 1 JBrowse link NW_004936472 377,359 389,121 RGD:9068941
G Mal2 mal, T cell differentiation protein 2 JBrowse link NW_004936470 27,315,356 27,390,078 RGD:9068941
G Oprd1 opioid receptor delta 1 JBrowse link NW_004936474 12,860,293 12,902,389 RGD:9068941
G Oprk1 opioid receptor kappa 1 JBrowse link NW_004936496 280,593 305,900 RGD:9068941
G Ptprn2 protein tyrosine phosphatase receptor type N2 JBrowse link NW_004936797 55,217 151,201 RGD:9068941
G Ptprs protein tyrosine phosphatase receptor type S JBrowse link NW_004936588 3,021,418 3,073,080 RGD:9068941
G Scamp1 secretory carrier membrane protein 1 JBrowse link NW_004936549 6,291,063 6,389,000 RGD:9068941
G Scamp5 secretory carrier membrane protein 5 JBrowse link NW_004936471 33,936,721 33,958,439 RGD:9068941
G Slc10a4 solute carrier family 10 member 4 JBrowse link NW_004936482 14,496,386 14,502,313 RGD:9068941
G Slc17a6 solute carrier family 17 member 6 JBrowse link NW_004936654 3,039,825 3,082,788 RGD:9068941
G Slc17a7 solute carrier family 17 member 7 JBrowse link NW_004936664 3,307,562 3,318,184 RGD:9068941
G Slc17a8 solute carrier family 17 member 8 JBrowse link NW_004936492 13,436,136 13,486,173 RGD:9068941
G Slc18a2 solute carrier family 18 member A2 JBrowse link NW_004936486 7,075,373 7,108,984 RGD:9068941
G Slc18a3 solute carrier family 18 member A3 JBrowse link NW_004936728 703,688 706,317 RGD:9068941
G Slc30a3 solute carrier family 30 member 3 JBrowse link NW_004936493 5,292,278 5,302,862 RGD:9068941
G Slc32a1 solute carrier family 32 member 1 JBrowse link NW_004936561 2,709,580 2,714,313 RGD:9068941
G Slc6a17 solute carrier family 6 member 17 JBrowse link NW_004936704 1,606,418 1,654,026 RGD:9068941
G Slc6a7 solute carrier family 6 member 7 JBrowse link NW_004936504 4,709,539 4,730,583 RGD:9068941
G Slc6a9 solute carrier family 6 member 9 JBrowse link NW_004936474 25,312,544 25,344,993 RGD:9068941
G Stx12 syntaxin 12 JBrowse link NW_004936474 12,019,099 12,057,028 RGD:9068941
G Stx16 syntaxin 16 JBrowse link NW_004936530 1,196,088 1,220,935 RGD:9068941
G Stx1a syntaxin 1A JBrowse link NW_004936543 2,909,560 2,918,175 RGD:9068941
G Stx6 syntaxin 6 JBrowse link NW_004936481 8,362,059 8,405,228 RGD:9068941
G Stx7 syntaxin 7 JBrowse link NW_004936560 464,667 512,322 RGD:9068941
G Sv2a synaptic vesicle glycoprotein 2A JBrowse link NW_004936580 243,829 257,708 RGD:9068941
G Sv2b synaptic vesicle glycoprotein 2B JBrowse link NW_004936483 11,377,375 11,450,830 RGD:9068941
G Sv2c synaptic vesicle glycoprotein 2C JBrowse link NW_004936549 592,975 819,252 RGD:9068941
G Syngr1 synaptogyrin 1 JBrowse link NW_004936492 2,253,703 2,262,040 RGD:9068941
G Synpr synaptoporin JBrowse link NW_004936637 2,796,707 3,128,916 RGD:9068941
G Syp synaptophysin JBrowse link NW_004936721 1,062,206 1,075,935 RGD:9068941
G Sypl1 synaptophysin like 1 JBrowse link NW_004936479 17,833,605 17,853,018 RGD:9068941
G Syt1 synaptotagmin 1 JBrowse link NW_004936698 65,210 575,538 RGD:9068941
G Syt11 synaptotagmin 11 JBrowse link NW_004936580 5,123,196 5,142,976 RGD:9068941
G Syt2 synaptotagmin 2 JBrowse link NW_004936567 1,941,651 1,984,422 RGD:9068941
G Syt9 synaptotagmin 9 JBrowse link NW_004936841 542,211 706,272 RGD:9068941
G Tmem163 transmembrane protein 163 JBrowse link NW_004936469 57,882,130 58,097,965 RGD:9068941
G Vamp1 vesicle associated membrane protein 1 JBrowse link NW_004936709 1,297,820 1,304,793 RGD:9068941
G Vamp2 vesicle associated membrane protein 2 JBrowse link NW_004936595 1,385,692 1,389,484 RGD:9068941
G Vamp3 vesicle associated membrane protein 3 JBrowse link NW_004936623 2,280,534 2,287,898 RGD:9068941
G Vamp4 vesicle associated membrane protein 4 JBrowse link NW_004936481 15,480,865 15,515,851 RGD:9068941
G Vamp7 vesicle associated membrane protein 7 JBrowse link NW_004936958 345,055 393,384 RGD:9068941
G Wfs1 wolframin ER transmembrane glycoprotein JBrowse link NW_004936477 18,339,915 18,364,973 RGD:9068941
synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link NW_004936528 1,608,782 1,682,873 RGD:9068941
G Bcl2l1 BCL2 like 1 JBrowse link NW_004936485 18,654,046 18,707,324 RGD:9068941
G Calm2 calmodulin 2 JBrowse link NW_004936508 5,207,909 5,223,780 RGD:9068941
G Calm3 calmodulin 3 JBrowse link NW_004936664 471,446 480,858 RGD:9068941
G Clta clathrin light chain A JBrowse link NW_004936524 4,170,425 4,191,951 RGD:9068941
G Cltb clathrin light chain B JBrowse link NW_004936597 665,365 689,867 RGD:9068941
G CUNH16orf70 chromosome unknown C16orf70 homolog JBrowse link NW_004936475 17,596,703 17,624,084 RGD:9068941
G Dlg2 discs large MAGUK scaffold protein 2 JBrowse link NW_004936498 11,549,526 13,519,638 RGD:9068941
G Dmd dystrophin JBrowse link NW_004936553 7,157,526 7,943,703 RGD:9068941
G Dnm1l dynamin 1 like JBrowse link NW_004936607 3,576,357 3,632,423 RGD:9068941
G Drd2 dopamine receptor D2 JBrowse link NW_004936612 1,094,686 1,154,149 RGD:9068941
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link NW_004936552 1,787,687 1,926,516 RGD:9068941
G Gad2 glutamate decarboxylase 2 JBrowse link NW_004936484 1,737,806 1,810,378 RGD:9068941
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link NW_004936515 8,937,391 9,236,438 RGD:9068941
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link NW_004936576 3,800,369 3,940,324 RGD:9068941
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link NW_004936669 814,330 838,881 RGD:9068941
G Ica1 islet cell autoantigen 1 JBrowse link NW_004936585 1,711,863 1,857,861 RGD:9068941
G LOC101967074 calmodulin JBrowse link NW_004936488 17,580,425 17,588,480 RGD:9068941
G Mctp1 multiple C2 and transmembrane domain containing 1 JBrowse link NW_004936523 8,050,001 8,553,427 RGD:9068941
G Mff mitochondrial fission factor JBrowse link NW_004936525 8,604,478 8,636,352 RGD:9068941
G Otof otoferlin JBrowse link NW_004936493 5,916,113 5,999,867 RGD:9068941
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha JBrowse link NW_004936636 2,054,672 2,083,580 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004936489 12,118,538 12,913,664 RGD:9068941
G Prrt1 proline rich transmembrane protein 1 JBrowse link NW_004936727 1,448,017 1,452,536 RGD:9068941
G Ptprn2 protein tyrosine phosphatase receptor type N2 JBrowse link NW_004936797 55,217 151,201 RGD:9068941
G Rph3a rabphilin 3A JBrowse link NW_004936668 2,827,574 2,911,955 RGD:9068941
G Scamp1 secretory carrier membrane protein 1 JBrowse link NW_004936549 6,291,063 6,389,000 RGD:9068941
G Sema4c semaphorin 4C JBrowse link NW_004936744 794,127 804,618 RGD:9068941
G Slc17a7 solute carrier family 17 member 7 JBrowse link NW_004936664 3,307,562 3,318,184 RGD:9068941
G Slc17a8 solute carrier family 17 member 8 JBrowse link NW_004936492 13,436,136 13,486,173 RGD:9068941
G Slc18a2 solute carrier family 18 member A2 JBrowse link NW_004936486 7,075,373 7,108,984 RGD:9068941
G Slc30a3 solute carrier family 30 member 3 JBrowse link NW_004936493 5,292,278 5,302,862 RGD:9068941
G Slc9b2 solute carrier family 9 member B2 JBrowse link NW_004936520 316,070 371,590 RGD:9068941
G Snap47 synaptosome associated protein 47 JBrowse link NW_004936864 313,650 381,553 RGD:9068941
G Snca synuclein alpha JBrowse link NW_004936685 2,077,017 2,175,298 RGD:9068941
G Stx1a syntaxin 1A JBrowse link NW_004936543 2,909,560 2,918,175 RGD:9068941
G Sv2a synaptic vesicle glycoprotein 2A JBrowse link NW_004936580 243,829 257,708 RGD:9068941
G Syn1 synapsin I JBrowse link NW_004936502 13,334,998 13,387,082 RGD:9068941
G Syn2 synapsin II JBrowse link NW_004936602 1,460,602 1,506,509 RGD:9068941
G Syn3 synapsin III JBrowse link NW_004936492 6,836,441 7,253,867 RGD:9068941
G Syndig1 synapse differentiation inducing 1 JBrowse link NW_004936620 1,165,312 1,359,127 RGD:9068941
G Syngr1 synaptogyrin 1 JBrowse link NW_004936492 2,253,703 2,262,040 RGD:9068941
G Syngr2 synaptogyrin 2 JBrowse link NW_004936594 2,775,144 2,783,894 RGD:9068941
G Syp synaptophysin JBrowse link NW_004936721 1,062,206 1,075,935 RGD:9068941
G Syt1 synaptotagmin 1 JBrowse link NW_004936698 65,210 575,538 RGD:9068941
G Trpm7 transient receptor potential cation channel subfamily M member 7 JBrowse link NW_004936471 12,564,617 12,666,229 RGD:9068941
G Unc13c unc-13 homolog C JBrowse link NW_004936471 15,691,357 16,225,590 RGD:9068941
G Vamp2 vesicle associated membrane protein 2 JBrowse link NW_004936595 1,385,692 1,389,484 RGD:9068941
trans-Golgi network transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrgn neurogranin JBrowse link NW_004936743 1,191,716 1,199,108 RGD:9068941
G Rassf9 Ras association domain family member 9 JBrowse link NW_004936507 3,265,356 3,297,495 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12050
    cellular anatomical entity 11881
      membrane 4707
        whole membrane 980
          transport vesicle membrane 124
            ER to Golgi transport vesicle membrane + 12
            Golgi to ER transport vesicle membrane 0
            clathrin-sculpted acetylcholine transport vesicle membrane 0
            clathrin-sculpted glutamate transport vesicle membrane 0
            clathrin-sculpted monoamine transport vesicle membrane 0
            cytoplasmic side of transport vesicle membrane + 0
            exocytic vesicle membrane + 107
            inter-Golgi transport vesicle membrane 0
            lumenal side of transport vesicle membrane + 0
            trans-Golgi network transport vesicle membrane + 6
Path 2
Term Annotations click to browse term
  cellular_component 12050
    cellular anatomical entity 11881
      organelle 9316
        membrane-bounded organelle 8263
          vesicle 1529
            intracellular vesicle 1401
              cytoplasmic vesicle 1395
                cytoplasmic vesicle membrane 266
                  transport vesicle membrane 124
                    ER to Golgi transport vesicle membrane + 12
                    Golgi to ER transport vesicle membrane 0
                    clathrin-sculpted acetylcholine transport vesicle membrane 0
                    clathrin-sculpted glutamate transport vesicle membrane 0
                    clathrin-sculpted monoamine transport vesicle membrane 0
                    cytoplasmic side of transport vesicle membrane + 0
                    exocytic vesicle membrane + 107
                    inter-Golgi transport vesicle membrane 0
                    lumenal side of transport vesicle membrane + 0
                    trans-Golgi network transport vesicle membrane + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.