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ONTOLOGY REPORT - ANNOTATIONS


Term:coated vesicle membrane
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Accession:GO:0030662 term browser browse the term
Definition:The lipid bilayer surrounding a coated vesicle.


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coated vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tepsin TEPSIN, adaptor related protein complex 4 accessory protein JBrowse link 10 109,271,161 109,278,745 RGD:11250428
RGD:1624291
AP-1 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aftph aftiphilin JBrowse link 14 104,921,633 104,975,763 RGD:1624291
RGD:13792537
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 JBrowse link 15 33,759,108 33,767,017 RGD:13792537
G Clba1 clathrin binding box of aftiphilin containing 1 JBrowse link 6 137,386,694 137,393,490 RGD:13792537
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:2317430
RGD:13792537
AP-2 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 JBrowse link 1 100,896,582 100,926,443 RGD:1624291
RGD:13792537
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 JBrowse link 1 214,534,217 214,607,497 RGD:12793054
RGD:13792537
RGD:1624291
RGD:1600115
G Ap2b1 adaptor related protein complex 2 subunit beta 1 JBrowse link 10 70,516,462 70,621,973 RGD:1624291
G Ap2m1 adaptor related protein complex 2 subunit mu 1 JBrowse link 11 84,041,184 84,047,542 RGD:12793054
RGD:13792537
RGD:1624291
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 JBrowse link 1 78,671,238 78,682,847 RGD:727584
RGD:2306270
RGD:1624291
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:13601995
RGD:1624291
RGD:1600115
G Eps15 epidermal growth factor receptor pathway substrate 15 JBrowse link 5 128,923,809 129,022,268 RGD:1624291
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:1624291
RGD:1600115
G Sgip1 SH3GL interacting endocytic adaptor 1 JBrowse link 5 122,300,415 122,498,478 RGD:1600115
RGD:8554282
RGD:1624291
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:2317430
RGD:13792537
G Tbc1d5 TBC1 domain family, member 5 JBrowse link 9 1,144,641 1,747,732 RGD:1624291
clathrin coat of endocytic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epn2 epsin 2 JBrowse link 10 47,795,496 47,857,373 RGD:708327
RGD:1600115
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC105531.1 RGD:13792537
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:1600115
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:1600115
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1600115
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:11535088
G Synrg synergin, gamma JBrowse link 10 71,278,698 71,357,791 RGD:631945
RGD:13792537
clathrin vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clint1 clathrin interactor 1 JBrowse link 10 30,833,914 31,007,813 RGD:13792537
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:70686
RGD:13792537
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:70686
RGD:13792537
G Enthd1 ENTH domain containing 1 JBrowse link 7 121,668,857 121,784,530 RGD:13792537
G Epn1 Epsin 1 JBrowse link 1 72,294,153 72,310,217 RGD:13792537
G Epn2 epsin 2 JBrowse link 10 47,795,496 47,857,373 RGD:13792537
G Epn3 epsin 3 JBrowse link 10 82,220,762 82,231,200 RGD:13792537
G Necap1 NECAP endocytosis associated 1 JBrowse link 4 155,709,712 155,724,801 RGD:1624291
RGD:13792537
G Necap2 NECAP endocytosis associated 2 JBrowse link 5 159,589,856 159,602,260 RGD:1624291
RGD:13792537
RGD:1600115
clathrin-coated endocytic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:1600115
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1600115
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
clathrin-coated vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcy8 adenylate cyclase 8 JBrowse link 7 105,353,883 105,593,372 RGD:1600115
G Ap1b1 adaptor related protein complex 1 subunit beta 1 JBrowse link 14 85,230,652 85,281,806 RGD:1600115
G Ap1m1 adaptor related protein complex 1 subunit mu 1 JBrowse link 16 19,288,354 19,303,818 RGD:1600115
G Ap1m2 adaptor related protein complex 1 subunit mu 2 JBrowse link 8 22,318,941 22,336,827 RGD:1600115
G Cemip cell migration inducing hyaluronidase JBrowse link 1 146,069,774 146,226,320 RGD:1624291
RGD:1600115
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:7243162
G Dbnl drebrin-like JBrowse link 14 86,029,335 86,044,364 RGD:1600115
G Dennd1a DENN domain containing 1A JBrowse link 3 22,061,120 22,501,502 RGD:1624291
G Reep6 receptor accessory protein 6 JBrowse link 7 12,240,059 12,246,814 RGD:1600115
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:1600115
G Vamp3 vesicle-associated membrane protein 3 JBrowse link 5 168,126,157 168,136,628 RGD:4892574
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link 1 276,310,072 276,508,635 RGD:1600115
COPI vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07071244.1 RGD:13792537
G Arcn1 archain 1 JBrowse link 8 49,051,257 49,075,861 RGD:13792537
G Copa COPI coat complex subunit alpha JBrowse link 13 90,467,285 90,508,894 RGD:1624291
RGD:13792537
G Copb1 COPI coat complex subunit beta 1 JBrowse link 1 183,695,480 183,729,569 RGD:632446
RGD:13792537
G Copb2 COPI coat complex subunit beta 2 JBrowse link 8 106,582,339 106,603,763 RGD:1624291
RGD:13792537
G Cope COPI coat complex subunit epsilon JBrowse link 16 20,863,141 20,873,516 RGD:13792537
G Copg1 COPI coat complex subunit gamma 1 JBrowse link 4 119,815,041 119,840,997 RGD:1600115
RGD:13792537
G Copg2 COPI coat complex subunit gamma 2 JBrowse link 4 58,064,394 58,195,242 RGD:1600115
RGD:13792537
RGD:1624291
G Copz1 COPI coat complex subunit zeta 1 JBrowse link 7 144,900,050 144,926,299 RGD:1624291
RGD:13792537
G Copz2 COPI coat complex subunit zeta 2 JBrowse link 10 84,718,824 84,731,880 RGD:1624291
RGD:13792537
G Dipk2a divergent protein kinase domain 2A JBrowse link 8 102,140,713 102,159,828 RGD:1624291
RGD:13792537
G Hmces 5-hydroxymethylcytosine binding, ES cell specific JBrowse link 4 119,841,088 119,864,115 RGD:1600115
G Scyl1 SCY1 like pseudokinase 1 JBrowse link 1 221,115,992 221,129,668 RGD:1624291
G Tmed3 transmembrane p24 trafficking protein 3 JBrowse link 8 97,075,194 97,083,107 RGD:1599272
RGD:13792537
COPI-coated vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Golga5 golgin A5 JBrowse link 6 126,350,572 126,378,735 RGD:1599272
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 JBrowse link 1 101,859,346 101,870,232 RGD:1624291
G Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 JBrowse link 12 13,192,452 13,210,758 RGD:1600115
RGD:1624291
G Kdelr3 KDEL endoplasmic reticulum protein retention receptor 3 JBrowse link 7 120,749,680 120,760,163 RGD:1624291
G Tmed2 transmembrane p24 trafficking protein 2 JBrowse link 12 37,471,259 37,480,344 RGD:1600115
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link 18 40,579,182 40,586,260 RGD:1600115
G Tmem199 transmembrane protein 199 JBrowse link 10 65,775,721 65,780,293 RGD:1624291
RGD:1600115
COPII vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07041481.1 RGD:13792537
G Klhl12 kelch-like family member 12 JBrowse link 13 51,280,933 51,314,753 RGD:1600115
RGD:1624291
G Pdcd6 programmed cell death 6 JBrowse link 1 31,576,183 31,591,852 RGD:1624291
RGD:1600115
G Pef1 penta-EF hand domain containing 1 JBrowse link 5 148,320,610 148,343,876 RGD:1624291
RGD:1600115
G Sar1a secretion associated, Ras related GTPase 1A JBrowse link 20 31,298,269 31,310,676 RGD:1624291
G Sar1b secretion associated, Ras related GTPase 1B JBrowse link 10 37,215,989 37,245,603 RGD:13792537
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 4 145,686,186 145,699,577 RGD:1624291
RGD:13792537
G Sec23a Sec23 homolog A, COPII coat complex component JBrowse link 6 80,059,742 80,107,340 RGD:1624291
RGD:13792537
G Sec23b Sec23 homolog B, COPII coat complex component JBrowse link 3 138,715,118 138,757,111 RGD:13792537
G Sec24a SEC24 homolog A, COPII coat complex component JBrowse link 10 37,138,539 37,215,899 RGD:1624291
RGD:13792537
G Sec24b SEC24 homolog B, COPII coat complex component JBrowse link 2 230,286,886 230,356,887 RGD:1624291
RGD:13792537
G Sec24c SEC24 homolog C, COPII coat complex component JBrowse link 15 4,035,196 4,057,209 RGD:1624291
RGD:13792537
G Sec24d SEC24 homolog D, COPII coat complex component JBrowse link 2 227,455,704 227,562,801 RGD:1624291
RGD:13792537
G Sec31a SEC31 homolog A, COPII coat complex component JBrowse link 14 10,854,713 10,909,579 RGD:1600115
RGD:13792537
RGD:1624291
G Sec31b SEC31 homolog B, COPII coat complex component JBrowse link 1 264,266,279 264,294,687 RGD:13792537
ER to Golgi transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gosr2 golgi SNAP receptor complex member 2 JBrowse link 10 91,735,772 91,756,123 RGD:13792537
G LOC100912478 vacuolar ATPase assembly integral membrane protein VMA21-like JBrowse link 17 35,126,955 35,134,495 RGD:1600115
G LOC103689964 vacuolar ATPase assembly integral membrane protein Vma21 JBrowse link 17 34,940,424 34,946,009 RGD:1600115
G LOC103694079 vacuolar ATPase assembly integral membrane protein Vma21-like JBrowse link 17 35,121,571 35,126,402 RGD:1600115
G Scap SREBF chaperone JBrowse link 8 118,551,869 118,628,650 RGD:1600115
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor JBrowse link 3 3,856,218 3,890,785 RGD:13792537
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor JBrowse link 13 75,153,074 75,216,941 RGD:13792537
G Sec22b SEC22 homolog B, vesicle trafficking protein JBrowse link 2 200,076,079 200,096,861 RGD:1624291
RGD:13792537
G Sec23a Sec23 homolog A, COPII coat complex component JBrowse link 6 80,059,742 80,107,340 RGD:1624291
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:1600115
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link 7 123,381,082 123,438,605 RGD:1600115
G Stx17 syntaxin 17 JBrowse link 5 63,866,346 63,926,276 RGD:1600115
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link 18 40,579,182 40,586,260 RGD:1600115
G Uso1 USO1 vesicle transport factor JBrowse link 14 17,371,451 17,436,948 RGD:1600115
RGD:13792537
G Vma21 vacuolar ATPase assembly factor VMA21 JBrowse link 16 70,142,561 70,151,833 RGD:1600115
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link 1 276,310,072 276,508,635 RGD:13792537
G Vti1b vesicle transport through interaction with t-SNAREs 1B JBrowse link 6 102,340,261 102,353,612 RGD:13792537
trans-Golgi network transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrgn neurogranin JBrowse link 8 40,015,049 40,023,193 RGD:9835422
G Rassf9 Ras association domain family member 9 JBrowse link 7 44,146,345 44,178,179 RGD:633607
RGD:13792537
RGD:1624291
RGD:1600115
vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sec31a SEC31 homolog A, COPII coat complex component JBrowse link 14 10,854,713 10,909,579 RGD:1624291
G Sec31b SEC31 homolog B, COPII coat complex component JBrowse link 1 264,266,279 264,294,687 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20300
    cellular anatomical entity 19956
      membrane 10079
        whole membrane 1351
          coated vesicle membrane 93
            COPI-coated vesicle membrane + 21
            ER to Golgi transport vesicle membrane + 31
            clathrin-coated vesicle membrane + 42
            vesicle coat + 56
Path 2
Term Annotations click to browse term
  cellular_component 20300
    cellular anatomical entity 19956
      organelle 12976
        membrane-bounded organelle 11167
          vesicle 2027
            intracellular vesicle 1868
              cytoplasmic vesicle 1862
                coated vesicle 210
                  coated vesicle membrane 93
                    COPI-coated vesicle membrane + 21
                    ER to Golgi transport vesicle membrane + 31
                    clathrin-coated vesicle membrane + 42
                    vesicle coat + 56
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.