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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle membrane
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Accession:GO:0030672 term browser browse the term
Definition:The lipid bilayer surrounding a synaptic vesicle.


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synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link 1 102,110,708 102,191,287 RGD:1549870
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Borcs5 BLOC-1 related complex subunit 5 JBrowse link 4 168,396,034 168,466,968 RGD:13792537
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:1600115
G Calm1 calmodulin 1 JBrowse link 6 124,217,241 124,225,292 RGD:12793033
G Calm2 calmodulin 2 JBrowse link 6 11,067,675 11,080,078 RGD:12793033
G Calm3 calmodulin 3 JBrowse link 1 78,844,520 78,851,628 RGD:12793033
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:12793033
RGD:13792537
RGD:13702292
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:13702292
RGD:13792537
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:12880362
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:2311574
RGD:13792537
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:13792537
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:8554107
RGD:1600115
RGD:1624291
G Gad2 glutamate decarboxylase 2 JBrowse link 17 89,171,576 89,234,770 RGD:1625237
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 2 179,584,302 179,704,629 RGD:728773
G Ica1 islet cell autoantigen 1 JBrowse link 4 34,635,509 34,780,187 RGD:1600115
RGD:1624291
G Lamp5 lysosomal-associated membrane protein family, member 5 JBrowse link 3 129,012,677 129,031,522 RGD:1600115
G LOC102556337 mitochondrial fission factor-like JBrowse link 9 90,880,586 90,908,848 RGD:12793033
G LOC500460 similar to olfactory receptor Olr841 JBrowse link 5 64,614,755 64,615,714 RGD:13792537
G Mctp1 multiple C2 and transmembrane domain containing 1 JBrowse link 2 3,400,883 4,089,949 RGD:13210552
RGD:13792537
G Mctp2 multiple C2 and transmembrane domain containing 2 JBrowse link 1 133,324,881 133,559,644 RGD:13792537
G Mff mitochondrial fission factor JBrowse link 9 88,490,280 88,518,517 RGD:12793033
G Olr1257 olfactory receptor 1257 JBrowse link 8 42,429,993 42,430,928 RGD:13792537
G Olr1320 olfactory receptor 1320 JBrowse link 8 43,628,182 43,629,120 RGD:13792537
G Olr533 olfactory receptor 533 JBrowse link 3 74,574,075 74,575,010 RGD:13792537
G Olr841 olfactory receptor 841 JBrowse link 5 64,621,407 64,622,359 RGD:13792537
G Otof otoferlin JBrowse link 6 27,328,343 27,424,864 RGD:1624291
RGD:1600115
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha JBrowse link 1 261,337,594 261,362,509 RGD:2306405
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:10413884
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
G Ptprn2 protein tyrosine phosphatase, receptor type N2 JBrowse link 6 144,384,773 145,133,042 RGD:1624291
RGD:1600115
G RGD621098 similar to RIKEN cDNA D230025D16Rik JBrowse link 19 37,179,850 37,207,714 RGD:1302287
RGD:13792537
G Rph3a rabphilin 3A JBrowse link 12 41,073,296 41,149,799 RGD:729719
G Scamp1 secretory carrier membrane protein 1 JBrowse link 2 23,858,021 23,941,128 RGD:1624291
RGD:1600115
G Sema4c semaphorin 4C JBrowse link 9 43,129,413 43,140,442 RGD:1624291
RGD:1600115
G Septin8 septin 8 JBrowse link 10 38,877,422 38,906,480 RGD:1600115
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 5 103,479,767 103,654,507 RGD:10047209
G Slc17a6 solute carrier family 17 member 6 JBrowse link 1 106,980,463 107,038,717 RGD:13792537
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:1624291
RGD:13792537
RGD:9999204
G Slc17a8 solute carrier family 17 member 8 JBrowse link 7 30,215,231 30,274,993 RGD:1624291
RGD:13792537
G Slc18a1 solute carrier family 18 member A1 JBrowse link 16 22,358,646 22,395,183 RGD:13792537
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:5130996
RGD:13792537
G Slc2a3 solute carrier family 2 member 3 JBrowse link 4 155,549,991 155,626,018 RGD:1642814
G Slc30a3 solute carrier family 30 member 3 JBrowse link 6 26,629,752 26,650,106 RGD:1624291
G Slc9b2 solute carrier family 9 member B2 JBrowse link 2 240,485,254 240,519,166 RGD:1624291
RGD:1600115
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:1624291
RGD:1600115
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1600115
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1600115
RGD:1624291
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:1624291
RGD:1549870
G Sv2a synaptic vesicle glycoprotein 2a JBrowse link 2 198,321,100 198,336,889 RGD:634182
RGD:13792537
G Sv2b synaptic vesicle glycoprotein 2b JBrowse link 1 136,664,199 136,842,247 RGD:13792537
G Sv2c synaptic vesicle glycoprotein 2c JBrowse link 2 26,495,757 26,707,691 RGD:13792537
G Svop SV2 related protein JBrowse link 12 48,292,272 48,351,974 RGD:1600115
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:1624291
RGD:13792537
G Syn2 synapsin II JBrowse link 4 147,037,179 147,195,096 RGD:1624291
RGD:13792537
RGD:1600115
G Syn3 synapsin III JBrowse link 7 23,403,896 23,808,602 RGD:1624291
RGD:13792537
RGD:1600115
G Syngr1 synaptogyrin 1 JBrowse link 7 121,311,008 121,334,437 RGD:70030
RGD:13792537
G Syngr2 synaptogyrin 2 JBrowse link 10 106,812,740 106,816,675 RGD:8554439
RGD:13792537
G Syngr3 synaptogyrin 3 JBrowse link 10 14,051,413 14,056,169 RGD:13792537
G Syngr4 synaptogyrin 4 JBrowse link 1 101,872,541 101,883,897 RGD:13792537
G Synpr synaptoporin JBrowse link 15 14,558,613 14,885,790 RGD:1302376
RGD:13792537
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:1600115
RGD:13792537
RGD:1624291
RGD:12793033
G Sypl1 synaptophysin-like 1 JBrowse link 6 52,265,920 52,286,037 RGD:13792537
G Sypl2 synaptophysin-like 2 JBrowse link 2 211,003,046 211,017,778 RGD:13792537
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:729959
RGD:13792537
RGD:12793033
RGD:1624291
G Syt12 synaptotagmin 12 JBrowse link 1 219,690,013 219,719,359 RGD:1600115
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:729949
RGD:13792537
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:1600115
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:13792537
G Syt6 synaptotagmin 6 JBrowse link 2 206,064,181 206,119,034 RGD:1600115
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1600115
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
G Tprg1l tumor protein p63 regulated 1-like JBrowse link 5 171,456,299 171,459,488 RGD:1600115
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 JBrowse link 3 119,258,189 119,347,084 RGD:5684965
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:13792537
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:13792537
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:11535093
RGD:13792537
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:634537
RGD:1624291
RGD:12793033
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link 1 276,310,072 276,508,635 RGD:1600115
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cplx3 complexin 3 JBrowse link 8 62,379,502 62,386,264 RGD:1600115
RGD:1624291
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 3 177,012,714 177,047,787 RGD:13702369
RGD:632551
G Rab10 RAB10, member RAS oncogene family JBrowse link 6 27,668,387 27,721,120 RGD:13432355
G Rab11b RAB11B, member RAS oncogene family JBrowse link 7 18,598,991 18,612,132 RGD:12050113
RGD:13432355
G Rab14 RAB14, member RAS oncogene family JBrowse link 3 14,373,270 14,395,357 RGD:13432355
G Rab26 RAB26, member RAS oncogene family JBrowse link 10 13,894,271 13,898,578 RGD:1600115
RGD:1624291
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:13432355
G Rab2a RAB2A, member RAS oncogene family JBrowse link 5 21,632,654 21,696,721 RGD:13432355
G Rab35 RAB35, member RAS oncogene family JBrowse link 12 46,704,274 46,718,404 RGD:13432355
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:12050113
RGD:13792537
RGD:1624291
RGD:13432355
G Rab3b RAB3B, member RAS oncogene family JBrowse link 5 128,501,789 128,568,170 RGD:13432355
RGD:1624291
RGD:12050113
G Rab3c RAB3C, member RAS oncogene family JBrowse link 2 41,570,955 41,786,681 RGD:13702220
G Rab4a RAB4A, member RAS oncogene family JBrowse link 19 56,585,598 56,613,078 RGD:13432355
G Rab4b RAB4B, member RAS oncogene family JBrowse link 1 83,979,298 83,990,680 RGD:13432355
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:12050113
RGD:13432355
RGD:13792537
G Rab5al1 Rab5a, member RAS oncogene family-like 1 JBrowse link 14 72,889,022 72,891,156 RGD:12050113
RGD:13432355
RGD:13792537
G Rab5b RAB5B, member RAS oncogene family JBrowse link 7 3,104,530 3,123,384 RGD:13432355
G Rab5c RAB5C, member RAS oncogene family JBrowse link 10 88,621,924 88,645,364 RGD:13432355
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
RGD:13432355
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:12050113
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amph amphiphysin JBrowse link 17 48,304,324 48,562,838 RGD:13702221
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 JBrowse link 4 115,417,100 115,435,754 RGD:12050113
G Bin1 bridging integrator 1 JBrowse link 18 25,163,575 25,222,139 RGD:631926
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:13702292
G Doc2a double C2 domain alpha JBrowse link 1 198,282,828 198,288,611 RGD:1357915
G Rph3a rabphilin 3A JBrowse link 12 41,073,296 41,149,799 RGD:12050113
RGD:13702383
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:13702369
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:13702180
RGD:13702282
G Syn2 synapsin II JBrowse link 4 147,037,179 147,195,096 RGD:13702354
RGD:13702180
G Syn3 synapsin III JBrowse link 7 23,403,896 23,808,602 RGD:13702180
RGD:13702156
integral component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link 10 88,914,264 88,967,736 RGD:12050113
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 JBrowse link 20 4,821,265 4,824,829 RGD:1624291
RGD:1600115
G Atp8a1 ATPase phospholipid transporting 8A1 JBrowse link 14 41,972,398 42,210,555 RGD:13702180
G Clcn3 chloride voltage-gated channel 3 JBrowse link 16 32,448,821 32,520,649 RGD:1624291
G Gabra2 gamma-aminobutyric acid type A receptor alpha2 subunit JBrowse link 14 39,662,411 39,801,082 RGD:1624291
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:12050113
G Mal2 mal, T-cell differentiation protein 2 JBrowse link 7 94,130,852 94,163,649 RGD:13702398
G Oprd1 opioid receptor, delta 1 JBrowse link 5 150,288,126 150,323,063 RGD:13702250
G Oprk1 opioid receptor, kappa 1 JBrowse link 5 13,742,655 13,760,460 RGD:13702363
G Ptprn2 protein tyrosine phosphatase, receptor type N2 JBrowse link 6 144,384,773 145,133,042 RGD:13702180
G Ptprs protein tyrosine phosphatase, receptor type, S JBrowse link 9 10,585,360 10,646,205 RGD:12790648
G Scamp1 secretory carrier membrane protein 1 JBrowse link 2 23,858,021 23,941,128 RGD:68303
RGD:69975
G Scamp5 secretory carrier membrane protein 5 JBrowse link 8 62,221,820 62,266,269 RGD:68303
G Slc10a4 solute carrier family 10, member 4 JBrowse link 14 37,764,839 37,770,059 RGD:1624291
RGD:1600115
G Slc17a6 solute carrier family 17 member 6 JBrowse link 1 106,980,463 107,038,717 RGD:9999204
RGD:13792537
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:9999204
RGD:13792537
G Slc17a8 solute carrier family 17 member 8 JBrowse link 7 30,215,231 30,274,993 RGD:1624291
RGD:13792537
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:13702244
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:13702155
RGD:13702308
G Slc30a3 solute carrier family 30 member 3 JBrowse link 6 26,629,752 26,650,106 RGD:1600115
RGD:1624291
G Slc32a1 solute carrier family 32 member 1 JBrowse link 3 155,102,980 155,107,815 RGD:9999204
RGD:13792537
RGD:13702256
G Slc6a17 solute carrier family 6 member 17 JBrowse link 2 210,249,663 210,299,770 RGD:13702218
G Slc6a7 solute carrier family 6 member 7 JBrowse link 18 56,305,765 56,325,179 RGD:13702417
G Slc6a9 solute carrier family 6 member 9 JBrowse link 5 136,669,674 136,703,702 RGD:13702299
G Stx12 syntaxin 12 JBrowse link 5 151,044,050 151,072,893 RGD:12050113
RGD:13792537
RGD:12050136
G Stx16 syntaxin 16 JBrowse link 3 172,154,739 172,183,699 RGD:12050113
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:13702228
G Stx6 syntaxin 6 JBrowse link 13 72,804,218 72,850,757 RGD:12050113
RGD:13792537
RGD:12050136
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:12050113
G Sv2a synaptic vesicle glycoprotein 2a JBrowse link 2 198,321,100 198,336,889 RGD:12050113
RGD:13702180
G Sv2b synaptic vesicle glycoprotein 2b JBrowse link 1 136,664,199 136,842,247 RGD:13702180
G Sv2c synaptic vesicle glycoprotein 2c JBrowse link 2 26,495,757 26,707,691 RGD:13702180
G Syngr1 synaptogyrin 1 JBrowse link 7 121,311,008 121,334,437 RGD:12050113
G Synpr synaptoporin JBrowse link 15 14,558,613 14,885,790 RGD:13702286
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:730209
RGD:13702387
RGD:12050136
G Sypl1 synaptophysin-like 1 JBrowse link 6 52,265,920 52,286,037 RGD:12050113
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:12050113
RGD:13702422
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:11079184
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:13702259
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:1600115
RGD:1624291
G Tmem163 transmembrane protein 163 JBrowse link 13 44,166,306 44,345,735 RGD:8553964
RGD:1624291
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:13702405
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:12050113
G Vamp3 vesicle-associated membrane protein 3 JBrowse link 5 168,126,157 168,136,628 RGD:12050113
G Vamp4 vesicle-associated membrane protein 4 JBrowse link 13 80,460,699 80,483,597 RGD:12050136
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:12050113
RGD:13702238
G Wfs1 wolframin ER transmembrane glycoprotein JBrowse link 14 78,640,707 78,665,224 RGD:12050113

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18523
    cellular anatomical entity 18191
      presynapse 651
        synaptic vesicle 256
          synaptic vesicle membrane 134
            clathrin coat of synaptic vesicle 0
            extrinsic component of synaptic vesicle membrane 10
            intrinsic component of synaptic vesicle membrane + 67
Path 2
Term Annotations click to browse term
  cellular_component 18523
    cellular anatomical entity 18191
      organelle 11871
        membrane-bounded organelle 10556
          vesicle 1909
            intracellular vesicle 1769
              cytoplasmic vesicle 1764
                secretory vesicle 635
                  exocytic vesicle 308
                    synaptic vesicle 256
                      synaptic vesicle membrane 134
                        clathrin coat of synaptic vesicle 0
                        extrinsic component of synaptic vesicle membrane 10
                        intrinsic component of synaptic vesicle membrane + 67
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.