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ONTOLOGY REPORT - ANNOTATIONS


Term:cortical cytoskeleton organization
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Accession:GO:0030865 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: cortical cytoskeleton organisation
 related_synonym: cortical cytoskeleton organization and biogenesis


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cortical cytoskeleton organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anln anillin, actin binding protein JBrowse link 8 23,336,455 23,397,122 RGD:13792537
G LOC103692165 rhotekin JBrowse link 4 113,967,384 113,984,636 RGD:13792537
G Ppp2r3c protein phosphatase 2, regulatory subunit B'', gamma JBrowse link 6 76,056,585 76,079,755 RGD:13792537
G Rtkn rhotekin JBrowse link 4 114,833,453 114,850,705 RGD:13792537
G Septin7 septin 7 JBrowse link 8 26,412,910 26,476,615 RGD:1624291
G Wdr1 WD repeat domain 1 JBrowse link 14 76,990,014 77,023,739 RGD:1624291
RGD:1600115
actin cortical patch assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Was WASP actin nucleation promoting factor JBrowse link X 15,155,246 15,164,099 RGD:13792537
G Wasl WASP like actin nucleation promoting factor JBrowse link 4 51,677,722 51,726,212 RGD:13792537
G Wipf1 WAS/WASL interacting protein family, member 1 JBrowse link 3 60,150,001 60,207,125 RGD:13792537
G Wipf2 WAS/WASL interacting protein family, member 2 JBrowse link 10 86,776,367 86,813,046 RGD:13792537
G Wipf3 WAS/WASL interacting protein family, member 3 JBrowse link 4 84,596,305 84,676,775 RGD:13792537
actomyosin contractile ring assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anln anillin, actin binding protein JBrowse link 8 23,336,455 23,397,122 RGD:13792537
G Kif23 kinesin family member 23 JBrowse link 8 66,866,043 66,893,241 RGD:1600115
G LOC103692165 rhotekin JBrowse link 4 113,967,384 113,984,636 RGD:13792537
G Pdcd6ip programmed cell death 6 interacting protein JBrowse link 8 121,916,233 121,973,145 RGD:1624291
RGD:1600115
G Racgap1 Rac GTPase-activating protein 1 JBrowse link 7 141,277,303 141,308,849 RGD:1624291
RGD:1600115
G Rtkn rhotekin JBrowse link 4 114,833,453 114,850,705 RGD:13792537
cortical actin cytoskeleton organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arf6 ADP-ribosylation factor 6 JBrowse link 6 91,697,109 91,698,257 RGD:1624291
RGD:1600115
G Calr calreticulin JBrowse link 19 25,956,771 25,961,666 RGD:1624291
RGD:1600115
G Cavin3 caveolae associated protein 3 JBrowse link 1 170,317,099 170,318,688 RGD:1624291
RGD:1600115
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1598417
G Cit citron rho-interacting serine/threonine kinase JBrowse link 12 46,334,669 46,494,152 RGD:13792537
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:1600115
RGD:1624291
G Ehd2 EH-domain containing 2 JBrowse link 1 77,847,599 77,865,870 RGD:1624291
RGD:1600115
G Epb41 erythrocyte membrane protein band 4.1 JBrowse link 5 150,081,727 150,243,186 RGD:1600115
G Epb41l1 erythrocyte membrane protein band 4.1-like 1 JBrowse link 3 152,492,725 152,622,047 RGD:1600115
G Epb41l2 erythrocyte membrane protein band 4.1-like 2 JBrowse link 1 20,881,820 21,067,713 RGD:1600115
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 JBrowse link 9 117,314,935 117,666,408 RGD:1600115
G Fmnl1 formin-like 1 JBrowse link 10 91,253,757 91,281,422 RGD:1624291
RGD:13792537
G Fmnl2 formin-like 2 JBrowse link 3 38,400,409 38,677,637 RGD:1624291
RGD:13792537
G Fmnl3 formin-like 3 JBrowse link 7 140,981,801 141,033,318 RGD:13792537
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:1600115
RGD:1624291
G Llgl1 LLGL scribble cell polarity complex component 1 JBrowse link 10 46,940,873 46,955,524 RGD:1600115
RGD:13792537
RGD:1624291
G Llgl2 LLGL scribble cell polarity complex component 2 JBrowse link 10 104,367,826 104,403,726 RGD:13792537
G LOC100911769 band 4.1-like protein 1-like JBrowse link 3 153,842,324 153,893,908 RGD:1600115
G Nckap1 NCK-associated protein 1 JBrowse link 3 67,725,180 67,804,680 RGD:13792537
G Nckap1l NCK associated protein 1 like JBrowse link 7 145,068,239 145,113,507 RGD:1624291
RGD:13792537
RGD:1600115
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
RGD:1600115
G Rab13 RAB13, member RAS oncogene family JBrowse link 2 189,581,209 189,586,358 RGD:8554106
G Rhoq ras homolog family member Q JBrowse link 6 10,533,151 10,568,582 RGD:1624291
RGD:1600115
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 1,273,490 1,390,790 RGD:1600115
RGD:13792537
RGD:1624291
G Rock2 Rho-associated coiled-coil containing protein kinase 2 JBrowse link 6 42,180,864 42,289,910 RGD:1600115
RGD:13792537
RGD:1624291
G Strip1 striatin interacting protein 1 JBrowse link 2 210,393,708 210,413,757 RGD:1624291
RGD:1600115
G Tln1 talin 1 JBrowse link 5 59,033,635 59,063,592 RGD:1624291
RGD:1600115
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
cortical microtubule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:1600115
RGD:1624291
G Ezr ezrin JBrowse link 1 47,287,872 47,331,412 RGD:1624291
RGD:1600115
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 JBrowse link 10 61,456,144 61,577,412 RGD:1624291
RGD:1600115
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 12 47,698,915 47,737,902 RGD:8553293
cytoskeletal matrix organization at active zone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:8554760
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ect2 epithelial cell transforming 2 JBrowse link 2 112,769,385 112,831,476 RGD:1600115
terminal web assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ezr ezrin JBrowse link 1 47,287,872 47,331,412 RGD:1624291
RGD:1600115
G Pls1 plastin 1 JBrowse link 8 103,557,361 103,659,625 RGD:1624291
RGD:1600115
G Vil1 villin 1 JBrowse link 9 81,689,802 81,717,623 RGD:1624291
RGD:1600115

Term paths to the root
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Term Annotations click to browse term
  biological_process 19245
    cellular component organization or biogenesis 6449
      cellular component organization 6239
        organelle organization 3773
          cytoskeleton organization 1384
            cortical cytoskeleton organization 49
              cortical actin cytoskeleton organization + 43
              cortical microtubule organization 4
              cytoskeletal matrix organization at active zone 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.