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ONTOLOGY REPORT - ANNOTATIONS


Term:HOPS complex
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Accession:GO:0030897 term browser browse the term
Definition:A multimeric protein complex that associates with the vacuolar membrane, late endosomal (multivesicular body) and lysosomal membranes. HOPS is a tethering complex involved in vesicle fusion.


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HOPS complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07026291.1 RGD:1600115
G Aktip AKT interacting protein JBrowse link 19 17,290,048 17,300,054 RGD:1624291
G Hook1 hook microtubule-tethering protein 1 JBrowse link 5 114,940,053 115,000,691 RGD:1624291
G Hook2 hook microtubule-tethering protein 2 JBrowse link 19 26,106,713 26,119,353 RGD:1624291
G Hook3 hook microtubule-tethering protein 3 JBrowse link 16 70,710,347 70,818,789 RGD:1624291
G Stx17 syntaxin 17 JBrowse link 5 63,866,346 63,926,276 RGD:1624291
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog JBrowse link 6 111,271,283 111,296,013 RGD:1624291
G Vps11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 8 48,677,492 48,692,295 RGD:1624291
RGD:13792537
G Vps16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link 3 122,947,887 122,969,543 RGD:1624291
RGD:13792537
G Vps18 VPS18 core subunit of CORVET and HOPS complexes JBrowse link 3 111,097,352 111,108,206 RGD:1624291
RGD:13792537
G Vps33a VPS33A core subunit of CORVET and HOPS complexes JBrowse link 12 38,459,816 38,482,903 RGD:1624291
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:1624291
G Vps39 VPS39 subunit of HOPS complex JBrowse link 3 112,087,213 112,125,307 RGD:1624291
G Vps41 VPS41 subunit of HOPS complex JBrowse link 17 48,643,754 48,810,633 RGD:1624291
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19733
    protein-containing complex 5748
      membrane protein complex 1201
        HOPS complex 14
          multivesicular body HOPS complex 0
          vacuolar HOPS complex + 0
Path 2
Term Annotations click to browse term
  cellular_component 19733
    cellular anatomical entity 19350
      membrane 9905
        membrane protein complex 1201
          HOPS complex 14
            multivesicular body HOPS complex 0
            vacuolar HOPS complex + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.